GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:21:36

Sequence gi568815596f:216399269_216601401 : 202133 bp : 44.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  15456  15620  165  1  0   84   63    94 0.168   6.43
 1.02 Intr +  16989  17039   51  1  0   91   80    86 0.905   6.98
 1.03 Intr +  21031  21114   84  2  0   91   45   108 0.716   6.59
 1.04 Intr +  29328  29514  187  1  1  111   58   153 0.965  13.35
 1.05 Intr +  33450  33600  151  0  1   80   38   239 0.809  18.26
 1.06 Intr +  36070  36228  159  0  0  112   50   151 0.999  13.88
 1.07 Intr +  39113  39217  105  1  0  101  113    62 0.971  10.41
 1.08 Intr +  47750  47890  141  1  0  101   79   199 0.995  20.85
 1.09 Intr +  51578  51796  219  1  0  109   74   282 0.964  27.40
 1.10 Intr +  56294  56456  163  1  1   70   71    51 0.438   1.15
 1.11 Term +  56541  56587   47  1  2   73   38    72 0.324  -1.93
 1.12 PlyA +  56888  56893    6                               1.05

 2.00 Prom +  57876  57915   40                              -4.96
 2.01 Sngl +  59978  60928  951  1  0   75   44   267 0.699  17.61
 2.02 PlyA +  61565  61570    6                               1.05

 3.00 Prom +  62781  62820   40                              -3.96
 3.01 Init +  64937  64945    9  1  0   54  103     0 0.285  -1.41
 3.02 Intr +  65329  65399   71  0  2   77  103    78 0.976   6.18
 3.03 Intr +  68676  68778  103  0  1   49  105    46 0.960   2.58
 3.04 Intr +  76001  76183  183  1  0  118   78   356 0.999  37.58
 3.05 Intr +  77841  77941  101  2  2   61   52   167 0.961   9.31
 3.06 Intr +  78935  79031   97  2  1   88   90    67 0.971   6.91
 3.07 Term +  83470  83709  240  0  0   45   42   271 0.988  14.23
 3.08 PlyA +  83728  83733    6                               1.05

 4.00 Prom +  84241  84280   40                              -7.76
 4.01 Init +  99607  99609    3  0  0  105  101     0 0.771   3.00
 4.02 Intr + 100002 100134  133  2  1   87   69   178 0.834  16.02
 4.03 Intr + 100681 100763   83  2  2   71   89   105 0.722   8.26
 4.04 Intr + 110177 110336  160  1  1   74   75    48 0.185   1.66
 4.05 Term + 114256 114347   92  2  2   52   49    74 0.205  -2.22
 4.06 PlyA + 114811 114816    6                               1.05

 5.00 Prom + 117752 117791   40                              -5.06
 5.01 Init + 121448 121506   59  1  2   58  111    39 0.176   3.98
 5.02 Intr + 121633 121683   51  1  0  122  100    24 0.939   5.02
 5.03 Intr + 122785 122896  112  1  1   84   94    29 0.847   3.48
 5.04 Term + 143457 143621  165  2  0   36   42   100 0.059  -1.88
 5.05 PlyA + 144123 144128    6                               1.05

 6.06 PlyA - 146896 146891    6                               1.05
 6.05 Term - 159277 159158  120  1  0   29   54   124 0.259   1.57
 6.04 Intr - 160358 160217  142  1  1   85   69    79 0.306   6.06
 6.03 Intr - 190029 189944   86  0  2   86  110    54 0.166   6.02
 6.02 Intr - 191815 191706  110  2  2   95    1    90 0.118   1.00
 6.01 Intr - 195013 194860  154  1  1   10   69   139 0.456   3.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:216399269_216601401|GENSCAN_predicted_peptide_1|490_aa
XEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRESYPDTK
TWNFSMNDYSALMKAAQSLPTVNLQPLEWAYGSSESPSTSIAKVRCLPQVQLDPLPTTLT
LAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGL
GKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAG
LINIVSFDLLSKLEKQLKTPFKVVIIDWILYTYVATSFQDESHFLKNSRTARCRAAMPVL
KVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSN
LGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKEMTTKDK
TPPLLIPSQTGSGVVLQQTPTDLQLRVLTVRRKTNKQKGRAHQNPICTSPSSKSKGMQLL
TSNGTKLDGE

>gi568815596f:216399269_216601401|GENSCAN_predicted_CDS_1|1473_bp
naggagcagaggaaaaagattgaagagaatcgacaaaaggctctggcccgcagagctgag
aagttattggcagaacagcatcagaggactagctcgggcacctccattgctggcaaccca
ttccaggccaagcaaggcccatcccaaaatttcccaagggagtcttatcctgacaccaag
acgtggaacttcagcatgaatgactatagtgccctgatgaaagcagcccagagcctcccc
acggtcaacctgcagcctctggaatgggcctatggcagcagcgagtcaccctccaccagc
attgcaaaggtgcgctgcctcccacaagttcagctggaccctctgcccacgactctcacc
ctggcgtttgcttctcagctcaagaagacatctctcagtctcacgccagatgtcccagag
gcagacctttctgaagtggaccccaagctcgtgtctaatctgatgccctttcagagagct
ggagtcaattttgccatagccaaaggaggccgcctgctgctcgctgacgacatgggcctg
gggaagaccatccaagccatctgcatcgcagccttttaccggaaggagtggccgctcctg
gtggtggtgccatcctccgtgcgcttcacctgggagcaggccttccttcggtggctgcca
tctctgagcccagattgcatcaacgtcgtggtgactgggaaggaccgcctgacagctggc
ctgatcaacattgtcagctttgaccttcttagcaagttggaaaaacagctaaaaacccct
tttaaagttgtcatcattgattggatcttgtacacttatgtggctacttcttttcaggat
gaatctcacttcctcaaaaacagtaggactgcccgctgtcgagcagctatgccggtccta
aaggttgccaagagggtgatcctgttgtcgggcacaccagccatgtcccggcccgcagag
ctctacacgcagatcatcgcagtcaagccaactttcttcccccagtttcatgcctttgga
cttcgctactgtgatgccaaacggatgccttgggggtgggactactcaggttcctccaac
ctgggagagctgaagctcctgctggaggaagcagtcatgctgcggcgcctcaagtccgac
gtcctttcccagctgcctgccaagcagcgcaagatagtggtgattgccccaggacggatc
aatgccaggaccagagctgccctggatgctgcagccaaggaaatgaccaccaaggacaaa
actcctccgctgctgataccgagccaaacagggtctggagtggtcctccagcaaactcca
acagacctgcagctgagagtcctgactgttagaaggaaaactaacaaacagaaaggacgt
gcacaccaaaaccccatctgtacgtcaccatcatcaaagagcaaaggaatgcagctcctc
accagcaatggaacaaagctggacggagaatga

>gi568815596f:216399269_216601401|GENSCAN_predicted_peptide_2|316_aa
MAILPRVIYRFNAVPIKLPMTFFTELEKITLKFIWNQKRAHIAKSILSQKNKAGVITLPD
FKLYYKATVTKTAWYWYQNRDLDQWNRTEPSETIPHIYNYLILDKPDKNKKWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRKPTEWEKSFAIYSSDKGLISRIY
KELKQICKKKTNNPINKRAKDMNRHFSKEDIYSANRHMKKCSSSLAIREMQIKTTMRYHL
TPVRMAIIKKSGNNRC

>gi568815596f:216399269_216601401|GENSCAN_predicted_CDS_2|951_bp
atggccatactgcccagggtaatttatagattcaatgccgtccccatcaagctaccaatg
actttcttcacagaattggaaaaaattactttaaagttcatatggaaccaaaaaagagcc
cacattgccaagtcaatcctaagccaaaagaacaaagctggagtcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatctagaccaatggaacagaacagagccctcagaaacaataccacacatctacaactat
ctgatccttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaacaaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggaaacctaca
gaatgggagaaaagttttgcaatctactcatctgacaaagggctaatatccagaatctac
aaagaactcaaacaaatttgcaagaaaaaaacgaacaaccccatcaacaagcgggcaaag
gatatgaacagacacttctcaaaagaagacatttattcagccaacagacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcgatcattaaaaagtcaggaaacaacaggtgctag

>gi568815596f:216399269_216601401|GENSCAN_predicted_peptide_3|267_aa
MSHKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELER
KHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWN
PGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMT
ESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAESFDPGSASGTSGSSSQNMGDTLD
ESSLTASPQKKRRFEFFDNWDSFTSPL

>gi568815596f:216399269_216601401|GENSCAN_predicted_CDS_3|804_bp
atgtcacataaacagcagcagaaagatgccctcattctcttcttcaacagaacagctgaa
gctaaaatcccatctgtcattgaatatatcttggacctactggaaagtggaagagagaag
tttttagtatttgcacaccataaggtggtcctggacgcaattacgcaagagcttgagaga
aagcacgtgcagcacatccgcatcgatggctccacctcatcagctgagcgggaggacctg
tgccagcagttccaactgtcggagaggcatgctgtggccgtgctgtccatcaccgctgcc
aatatgggcctcaccttctcctcggctgacctggtggtgtttgctgagctgttttggaac
ccaggggtgctgatccaggctgaggaccgcgtgcaccgcattggacagaccagctccgtg
ggcattcactacctcgtggcaaagggcacagctgatgactacctttggcccctgattcaa
gagaagattaaagttctggcagaagccgggctttctgagaccaatttttcagaaatgaca
gaatccactgattacctctacaaggacccaaagcagcagaagatctacgacctattccag
aagtcctttgagaaagaaggaagtgatatggagctcctggaagcagcagagtcctttgac
ccaggaagtgcttcaggaacatctggaagtagttcccagaacatgggagacaccctggat
gaaagctcattgacagccagtccacagaagaaaaggagatttgaattttttgataactgg
gacagctttacgtctcccctgtaa

>gi568815596f:216399269_216601401|GENSCAN_predicted_peptide_4|156_aa
MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKVNQDEETSCGDLALWF
LHEDSGWRCLDVQNCEDSHYQSLIEKQLTKVSHLGMVANWEFGLISEGMNAFLVPHVILR
GIFGIASLCFRYLAISKENIQKEAPKKEKNKYVYKT

>gi568815596f:216399269_216601401|GENSCAN_predicted_CDS_4|471_bp
atggccaaacgtaccaagaaagtcgggatcgtcggtaaatacgggacccgctatggggcc
tccctccggaaaatggtgaagaaaattgaaatcagccagcacgccaagtacacttgctct
ttctgtggcaaagtaaaccaagatgaagagacgagctgtggggatctggcactgtggttc
ctgcatgaagacagtggctggcggtgcctggacgtacaaaattgtgaggatagtcattac
cagtctctgattgagaagcagcttacaaaggtatcgcatcttggtatggtagctaattgg
gaatttgggttgattagtgaagggatgaatgcttttttggttccacatgtgatacttagg
ggcatctttggaattgcatctctgtgcttcagataccttgccatatcaaaagaaaatatc
cagaaagaagcaccaaaaaaggaaaagaacaaatacgtgtacaagacatag

>gi568815596f:216399269_216601401|GENSCAN_predicted_peptide_5|128_aa
MPKWNQISMNSANGRRGKGRLYTLVVWTGGELDIAGRTKVDEVHGQPFGSDSDHFCLHFM
NKASHIAYGSSTVWQLPACKVLPRLLIGFLQYEGKVIILTLDENTDSEKLSDLLKVTQLA
SSRAKAGT

>gi568815596f:216399269_216601401|GENSCAN_predicted_CDS_5|387_bp
atgccaaaatggaaccaaatctccatgaactctgctaatggaagacgaggaaaaggcagg
ttgtacacactagtagtgtggacaggaggagagttggatattgctggaaggaccaaggta
gatgaagtacacggccagccctttggaagtgactcagatcacttctgcctacatttcatg
aacaaagcaagccacatagcttatgggagttcaacagtatggcaacttccagcttgcaag
gtgctacctcgtcttctcattggattcttacaatatgaaggcaaagttatcattctcact
ttagatgaaaacactgactcagagaagttaagtgacttgctcaaagtcacccagctggct
agcagcagggccaaggccggaacctag

>gi568815596f:216399269_216601401|GENSCAN_predicted_peptide_6|203_aa
VKVRQKINSQGKYDEDKKRLVDLENEVAVMILPWHYQSDLDGNQVTKEGGMVRGHKKPVT
PSPGTVPTSHTDRCFTPPLLGSTSYSPWSFGQLAPEIFQWPIREQAGRAVTPAMEVRIED
FINKVLSSSLVVWILKPALKEEGEGFRGNAPRADPQDGFLQQMQPPLIGCLLQEKHQEVR
IAMGGTEDGGPLICGIGNGLWVT

>gi568815596f:216399269_216601401|GENSCAN_predicted_CDS_6|612_bp
gttaaagtgaggcaaaagataaacagtcaaggaaaatatgatgaggataagaaaaggcta
gtggatttggaaaatgaggtggcagtgatgatcttgccatggcactaccagagtgacctg
gatggaaaccaggtcacaaaggaaggaggaatggtacgtggccataagaaacccgtgaca
ccctcccctggaactgtacccacgtcccacacggacagatgcttcactcctccacttctt
ggcagtacttcctacagcccctggagctttggccagctagccccagaaatcttccagtgg
cccatcagagagcaagctggcagagctgtcactcccgccatggaagtcaggatagaggac
ttcatcaacaaggttctttcatcttccttagttgtttggatccttaagcctgccttgaaa
gaagagggagaaggcttcaggggaaatgctccccgcgctgacccacaggatggcttcctt
caacaaatgcagccacctttgattggctgcctgctacaagagaaacatcaggaggtacgt
attgccatggggggaactgaagatggaggacccctcatttgtggaattgggaacgggctt
tgggtcacatga