GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:24:06

Sequence gi568815596f:158903845_159104319 : 200475 bp : 41.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3663   3731   69  2  0   91  105    73 0.920  10.40
 1.02 Intr +   9516   9677  162  2  0   67  -10   156 0.158   2.95
 1.03 Intr +  17959  18051   93  0  0   67   89    34 0.000   0.64
 1.04 Term +  28119  28235  117  2  0   -1   41   161 0.000   0.06
 1.05 PlyA +  29828  29833    6                               1.05

 2.04 PlyA -  30544  30539    6                               1.05
 2.03 Term -  31548  31364  185  1  2   74   44   153 0.128   6.22
 2.02 Intr -  40461  40308  154  0  1   50   70   143 0.643   7.42
 2.01 Init -  59942  59886   57  2  0   62   68   106 0.905   7.36
 2.00 Prom -  60003  59964   40                              -6.65

 3.00 Prom +  60253  60292   40                             -10.55
 3.01 Init +  61485  61545   61  2  1   88   63    23 0.880   1.42
 3.02 Intr +  64059  64215  157  1  1   94   97   152 0.945  14.85
 3.03 Intr +  65612  65922  311  2  2   19   75   236 0.151  10.43
 3.04 Intr +  84949  85138  190  2  1   72   86    66 0.073   2.52
 3.05 Term +  91668  91734   67  0  1   71   44   110 0.330   1.33
 3.06 PlyA +  92578  92583    6                               1.05

 4.00 Prom +  95544  95583   40                              -4.05
 4.01 Sngl +  98127  98498  372  2  0   31   47   295 0.735  15.58
 4.02 PlyA +  98682  98687    6                               1.05

 5.00 Prom +  99016  99055   40                              -7.65
 5.01 Sngl + 100176 100478  303  2  0   77   42   382 0.808  28.08
 5.02 PlyA + 100857 100862    6                               1.05

 6.00 Prom + 107220 107259   40                              -5.55
 6.01 Init + 112324 112545  222  0  0   98  100    96 0.154  10.40
 6.02 Intr + 129890 130074  185  1  2   65   85    81 0.013   3.16
 6.03 Term + 131066 131210  145  2  1   56   55   127 0.470   2.60
 6.04 PlyA + 131249 131254    6                              -0.45

 7.02 PlyA - 131655 131650    6                               1.05
 7.01 Sngl - 133636 133208  429  1  0   66   42   236 0.902  12.83
 7.00 Prom - 135377 135338   40                              -9.95

 8.02 PlyA - 135402 135397    6                               1.05
 8.01 Sngl - 136765 136310  456  1  0   58   44   261 0.203  14.64
 8.00 Prom - 139799 139760   40                              -6.35

 9.00 Prom + 143869 143908   40                              -4.55
 9.01 Init + 145876 146010  135  0  0   71   87    52 0.058   3.59
 9.02 Intr + 162052 162216  165  0  0  125   14    91 0.254   4.64
 9.03 Intr + 170293 170376   84  0  0  128   93    10 0.042   4.60
 9.04 Intr + 183851 183910   60  1  0   73   83    49 0.085   0.91
 9.05 Intr + 185907 186102  196  2  1   28   33   150 0.063   1.57
 9.06 Term + 186895 187013  119  2  2   52   41   141 0.323   3.52
 9.07 PlyA + 187556 187561    6                               1.05

10.02 PlyA - 187574 187569    6                               1.05
10.01 Term - 190858 190646  213  1  0   31   55   187 0.079   5.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_1|146_aa
MEKSRPPETYFGRITGRFADGLETWTQIGTYAVICLASQAFGLRLELHHQLSLVTSLLTG
DLGASQLLYSHEPMPYNDPMTTATAYSACSERGCMSKQAQGLATAHSQNDGCGWRFMSPL
RAMAREELAKERCKIRFTAAGEESTK

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_1|441_bp
atggagaaaagcaggccaccagaaacatattttggacggataactggaagatttgctgat
ggactggagacttggactcagattggaacttacgctgtcatctgtctggcttctcaggcc
tttggactcagactggaactccaccatcagctctccttggtcaccagcttattgactgga
gatcttggggcttctcagcttctctattcgcatgaaccaatgccttataacgatcccatg
accactgcaactgcgtactcagcctgcagcgagagggggtgcatgagcaagcaagcacag
ggcctggccacagcacacagtcagaatgatggttgtggctggcggtttatgtcccctcta
agagccatggccagagaggaacttgcaaaggaaagatgcaagatcaggtttacagctgct
ggtgaagagtccactaaataa

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_2|131_aa
MRNVDIVDDEENQLDKIEEPCSLAALESVTTSGKISCGIGKGPGDTIKANPVRGPFRATY
LAAKWLWAWQEESSKMTVPLILSSKPRVVLSEKGGEDGYARADIAPILALAGLAGTGTVG
QENRELEIPCF

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_2|396_bp
atgaggaatgttgatattgtggatgatgaagaaaatcaacttgataaaattgaagagcct
tgtagcttggctgcccttgagtcagttaccacctctggcaaaatcagctgtggaataggg
aagggaccaggagataccatcaaagcaaatcctgtccgaggaccattcagggctacctac
ctagctgccaagtggctgtgggcgtggcaagaggagtcaagtaaaatgaccgtgcctctc
attctgtcttccaaacctagggtggtcctctctgagaaaggaggagaagatgggtatgca
agagcagatatagctcccatccttgcccttgctggactggcaggtactgggacagtgggg
caggagaacagagaacttgaaattccctgcttttga

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_3|261_aa
MVLASVYGHGSLHTLGLWCREARRWPSVNVAQTARASPERSQEAPDPRPQGRPGNHRPQN
VPHSFWEIKRRSRGGALRRAVIVKIVSPLVLGCRVVIFGGRYQGTGFLEDFGVRARSAVG
VRGSRLWRGGFPERLAGKEALGIVWCVCRQKGPWTGVLKTYWTYCVKLREEMWRWPGEAL
YLPPGLMAGRLDPCHLLRCCPPHPLLAHSHYRLPNRHFLGRLYLTKIGHFVDPLGVLVQS
TLPEGGTLGNFKLRLPMAVIA

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_3|786_bp
atggtgttggcatccgtgtatggccatggatcgttacacacgctgggactgtggtgtagg
gaagcacgacgctggccctctgtgaatgtagcgcagacagcacgggccagcccggagcgg
tcgcaggaggctccagacccgcggccccagggacgcccgggaaatcaccggccccagaac
gtcccccattccttttgggaaataaaaagacgcagccggggtggggcgctgagaagagcg
gtaattgtcaagattgtgagcccccttgttcttggatgcagagtggtcattttcggggga
cgatatcagggcactggcttcctggaggactttggggtgcgggcgcgcagcgctgtgggt
gtgcggggctcccggctttggcgcggcggctttccggaacgcctggctgggaaggaagct
ctaggcattgtgtggtgtgtttgcagacagaaaggtccctggaccggtgttctcaaaact
tactggacttattgtgtaaagctccgggaggaaatgtggcgttggccaggtgaggctctg
tacctacctccaggtctcatggcaggtcgactggacccctgccacctcctgcggtgctgc
cctcctcacccactccttgcccactctcactatcggcttcctaataggcatttcctgggg
cgactgtatctgactaaaattggtcattttgtagatcctttaggggtcctggtccaaagc
acattacccgagggcgggactcttggaaacttcaaactgaggctccccatggctgtcatt
gcttaa

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_4|123_aa
MRSRMDRTILQCPDWACAVMELAKSPSDTNLFSERGWRLWRSGRAQRGVCQCDPKKVLSA
EDSSQTGTCGRRGWRYGQCGHEFSLGASSHLPPECPFFLLACPRGPRLPIEPEVSKLIVN
LGA

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_4|372_bp
atgagaagtcggatggacaggaccatcctccagtgtccagactgggcatgtgctgtcatg
gaactggcaaaaagtccaagtgacaccaacttgttctcagaaaggggctggaggttatgg
agaagtgggagagcccagcgtggggtgtgccagtgtgatccaaagaaagtcttgtcagca
gaggattcttcccagactgggacctgcggccggaggggctggcggtatggacagtgtgga
catgagttcagcctgggtgcctcttctcatcttcctcctgaatgccctttcttcctgctg
gcctgcccgaggggacccaggctgcccattgagcctgaagtcagcaagctgatcgtgaat
ttaggtgcatga

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_5|100_aa
MIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAE
QFPRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEAN

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_5|303_bp
atgattaaagatgatgggacagttattcatttcaacaatcccaaagtccaagcttccctt
tctgctaatacctttgcaattactggtcatgcagaagccaaaccaatcacagaaatgctt
cctggaatattaagtcagcttggtgctgacagtttaacaagccttaggaagttagctgaa
cagttcccacggcaagtcttggacagtaaagcaccaaaaccagaagacattgatgaggaa
gatgatgatgttccagatcttgtagaaaattttgatgaggcatcaaagaatgaagctaac
taa

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_6|183_aa
MAEGKKEQVPSYMDCSRQRENEEDAKAETPNKTIRSHETYSLPQEQYGGTTPMIQLSPTE
SLPQHVGIMGVQFKASPQVLSYPASVTSENIMMLMKSRSHSTCMCASWFYTKESSVLQAL
WLLVVILECVVLCQTCLSGPHIVVKAVFNAAEPFTAGGFGPSHGIDGDMLWSMNTYSSLC
LVV

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_6|552_bp
atggcggaaggtaagaaggaacaagtcccatcttatatggattgcagcaggcaaagagaa
aatgaggaagatgcaaaagcagaaacccctaataaaacaatcagatctcatgagacttat
tcactaccacaagaacagtatgggggaacgacccccatgattcaattatctcccactgag
tctctcccacaacacgtgggaattatgggagtacaattcaaggcttcaccccaggttctt
tcttatccagcctctgtcacatctgaaaacatcatgatgctcatgaaatcaaggtcacat
tcaacctgcatgtgcgccagctggttttataccaaggaaagctctgttcttcaggcactg
tggctcttagtagttatccttgaatgcgttgtgctttgtcaaacttgcctctctgggcct
cacattgtagtcaaagcagtgttcaatgctgcagaaccctttacagctggaggatttgga
ccgtcacatggaatcgatggagacatgctttggtccatgaacacatacagtagcctttgt
cttgtggtctga

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_7|142_aa
MKALEENLGNTIPDIGTGKDFMTKTILATKAKIDKWDLIKLKSFCTAKETTIRVNWQPTE
WEKIFAIYPSDKELIPRIYKELKQIFKKKSNNPIKKWAKEMNRHFSKEDIYAANRHMKKC
SSSTGHQRNANQNHNEIPSHTS

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_7|429_bp
atgaaagccctagaagaaaacctaggcaataccattccggacataggcacgggcaaagac
ttcatgactaaaacaattttggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaactggcaacctacagaa
tgggagaaaatttttgcaatctacccatctgacaaagagctaatacccagaatctacaaa
gaacttaagcaaattttcaagaaaaaatcaaacaaccccatcaaaaagtgggcaaaggaa
atgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgc
tcatcatccactggtcatcagagaaatgcaaatcaaaaccacaatgagataccatctcac
accagttag

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_8|151_aa
MELKIMARELHDACTSFSSQFDQVEERESVIEDQMNEMKREEKFRERRVKRNEQSLQEIW
DYVKRPNLHLIGIPESDGDNVTKLKNTLQDIIQENFPNLARHANIQIQEIQRTPQRYSLR
RATPRLKNKGMEEDLPSKWKAKKSRGCNPSL

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_8|456_bp
atggagctgaaaatcatggcacgagaactacatgatgcatgcacaagcttcagtagccaa
tttgatcaagtggaagaaagggaatcagtgattgaagatcaaatgaatgaaatgaagcga
gaagagaagtttagagaaagaagagtaaaaagaaacgaacaaagcctccaagaaatatgg
gactatgtgaaaagaccaaatctacatttgattggtatacctgaaagtgatggggacaat
gtaaccaagctgaaaaacactcttcaggatattatccaggagaacttccccaacctagca
aggcacgccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgaga
agagcaacccccaggctcaaaaataaagggatggaggaagatctaccaagcaaatggaaa
gcaaaaaaaagcaggggttgcaatcctagtctctga

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_9|252_aa
MRKRRGFESRELKRMVLYQQEPGPRLVSGFWKWGEEDGFSFGHVEKQVLKMLKAVLKKSR
EGGKGGKKEAGMCARMRSSAMDSGQQAAPHPRPDGFVALGGQASYTSSAMKIPLFLSYVL
VTTVQWVKAFGVGREGTRVVGEIVFTKKDCGRLSTAGIQPSEQGTGTLLPVMPVSTVVSC
KQACLRAVPTHMSLRAHALWNRASFHPLAKLGLSRMTGASATVLQKQQAQMLQELINVQY
PRRGEETRVLDD

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_9|759_bp
atgagaaagaggaggggctttgagtctcgtgaactaaaaaggatggtgctttatcagcag
gaacctggacccagactagtgagtgggttttggaagtggggagaggaagatgggtttagt
tttggacatgttgagaaacaagtgttgaaaatgttaaaggctgtgctgaagaagagccga
gagggaggaaagggaggcaagaaggaagcaggtatgtgtgcaagaatgagaagctcagcc
atggacagcgggcagcaagctgctcctcaccccaggccggatggatttgttgctttggga
gggcaggctagttatacctcatcagccatgaaaataccattgttcttgtcctatgttctg
gtgaccacagtgcagtgggtaaaggctttcggtgttggacgggaggggacaagggttgtg
ggtgaaattgtgttcaccaaaaaggactgtggcaggctcagcactgctggcatccaacct
tcagagcagggcactggcactcttcttcctgttatgcccgtgtccactgtagtcagctgc
aaacaagcttgcctccgagcagtgcctacacacatgtcacttcgagcacatgctttgtgg
aatagagcttcatttcacccacttgccaagttaggccttagcagaatgaccggagccagc
gccactgtgctgcagaagcagcaggcccaaatgctgcaagagttaataaatgtccagtac
ccacggagaggagaggaaactagggtgcttgatgactaa

>gi568815596f:158903845_159104319|GENSCAN_predicted_peptide_10|70_aa
NHRGQSYSTVHESGIFEKPPRGFRPGHEFSQLLSLQLSGEETDLKAELGCTMMPARSGAG
CPLTRQTCKS

>gi568815596f:158903845_159104319|GENSCAN_predicted_CDS_10|213_bp
aaccacaggggccagtcttatagcactgtgcatgagtctggaatctttgagaaaccacct
cgaggctttcggccaggtcacgagttttcccagctgctttcccttcaactgtctggcgag
gaaacagatcttaaggcagagctaggctgcaccatgatgccagcgcgcagtggagccgga
tgccctctgacccgacaaacttgtaaaagctga