GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:33:37

Sequence gi568815596f:119267585_119472315 : 204731 bp : 43.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1238   1277   40                              -1.96
 1.01 Init +  23571  23658   88  2  1   62   70   102 0.704   6.60
 1.02 Term +  29093  29229  137  0  2   70   43    75 0.148  -0.62
 1.03 PlyA +  30644  30649    6                               1.05

 2.05 PlyA -  30800  30795    6                               1.05
 2.04 Term -  34964  34888   77  0  2  100   48    46 0.310  -0.20
 2.03 Intr -  43900  43802   99  2  0   63   91    46 0.751   2.48
 2.02 Intr -  44119  44038   82  1  1   96   85    91 0.932   8.81
 2.01 Init -  63951  63904   48  0  0   80   65    55 0.276   3.35
 2.00 Prom -  64161  64122   40                              -4.86

 3.00 Prom +  79223  79262   40                              -2.96
 3.01 Init +  79449  79491   43  2  1   35  110    29 0.281   0.38
 3.02 Intr +  91258  91449  192  2  0  -26   82   134 0.031   0.86
 3.03 Intr +  99354  99476  123  1  0   36   92   105 0.150   6.26
 3.04 Intr + 100223 100347  125  0  2   52   22    31 0.080  -6.80
 3.05 Intr + 100604 100721  118  1  1   98   85   155 0.950  16.24
 3.06 Intr + 103156 103218   63  2  0   71   86    93 0.678   6.09
 3.07 Term + 104661 104734   74  1  2   96   54   133 0.888   8.77
 3.08 PlyA + 106243 106248    6                               1.05

 4.02 PlyA - 106356 106351    6                               1.05
 4.01 Sngl - 147258 146821  438  0  0   29   35   303 0.996  15.36
 4.00 Prom - 150965 150926   40                              -2.16

 5.00 Prom + 154632 154671   40                              -7.46
 5.01 Init + 159480 159588  109  2  1   96   55    55 0.721   3.46
 5.02 Intr + 163901 164125  225  0  0   82    3   169 0.596   5.76
 5.03 Intr + 164221 164340  120  2  0   76   68    85 0.767   5.77
 5.04 Intr + 168940 169070  131  2  2   43   77    32 0.285  -1.99
 5.05 Term + 169305 169856  552  2  0   91   47   655 0.977  56.01
 5.06 PlyA + 170120 170125    6                              -0.45

 6.10 PlyA - 171133 171128    6                               1.05
 6.09 Term - 172673 172533  141  2  0  101   54   132 0.999   9.03
 6.08 Intr - 174015 173974   42  0  0  118  105    96 0.974  12.74
 6.07 Intr - 179301 179175  127  2  1   55  111   162 0.671  15.88
 6.06 Intr - 181196 181105   92  2  2  114   97   -11 0.993   1.19
 6.05 Intr - 184495 184426   70  0  1  120  105    89 0.990  12.98
 6.04 Intr - 185763 185703   61  1  1  126   94     8 0.842   2.99
 6.03 Intr - 194416 194263  154  1  1  102   63   192 0.888  17.75
 6.02 Intr - 196671 196539  133  2  1  124   52   279 0.994  28.55
 6.01 Intr - 198302 198205   98  2  2   82   97   197 0.996  18.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:119267585_119472315|GENSCAN_predicted_peptide_1|74_aa
MAGKVSYRGEAARQDVKMNGWALIGWCLAGRKRRKRKPVCYGKEVPQSHMKPGPTRGTRA
QVFLWQRQVLFKGE

>gi568815596f:119267585_119472315|GENSCAN_predicted_CDS_1|225_bp
atggcaggaaaggtgtcataccgaggagaagctgctcggcaagatgtaaagatgaacggc
tgggcattaatcggctggtgcctggcaggcagaaaaagaaggaaaagaaaacccgtttgc
tacggcaaagaagttcctcaaagtcacatgaaacctggcccaactcgtgggaccagggcc
caagtgttcctttggcaaaggcaagttctcttcaaaggagaatag

>gi568815596f:119267585_119472315|GENSCAN_predicted_peptide_2|101_aa
MGSSEDLQRIFEDMQSTNELVLSLEDDERLLLKEDSTLKAAGIEEEDENDVHSDLLAEDS
RCLLSKYAECKWLFSEASETEIAFFCEEDYKNYKANPISSW

>gi568815596f:119267585_119472315|GENSCAN_predicted_CDS_2|306_bp
atggggagctctgaagatttgcagaggatctttgaagatatgcagagtacaaatgaactt
gtgttgagtttggaagatgacgaaagactcctgctgaaagaagacagcactctgaaagca
gctggaatcgaggaggaggatgagaatgatgtgcattccgatctcttggctgaggacagt
aggtgtctgctctccaaatatgcagaatgcaaatggctgttttcagaagccagtgaaact
gaaattgcattcttctgtgaagaagattataagaactacaaagctaatcccatttcatcc
tggtga

>gi568815596f:119267585_119472315|GENSCAN_predicted_peptide_3|245_aa
MSVGDDHKAVLKPSGADVEAAPSYPEDLAKIDEAGYTKQQIFNTDKTALYWKMKPSRICI
AREKSTPGFKASKDRLTVGLGRVDRASKGACQCNLGDRFLVLASSAVSLEFLQVGQDVSV
PGPVVARQLAALLLPQRGPPLGAKAWPALFTAVFPDLMPAFAEFEKAAEEVRHLKTKPSD
EEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELK
KKYGI

>gi568815596f:119267585_119472315|GENSCAN_predicted_CDS_3|738_bp
atgagtgtaggtgatgatcataaagcggtgttaaaaccatcaggtgctgatgtagaagct
gcaccaagttatcctgaagatctagctaagattgatgaagctggctacactaaacaacag
attttcaacacagacaaaacagccttatattggaagatgaagccatctaggatctgcata
gctagggagaagtcaacgcctggttttaaagcttcaaaggacaggctgactgtggggttg
gggcgagtggaccgcgcctctaaaggcgcttgccagtgcaatctgggcgatcgcttcctg
gtcctcgcctcctccgctgtctccctggagttcttgcaagtcggccaggatgtctcagtg
cctggcccggtggtggccaggcagttggccgcgctgcttctcccgcagaggggaccccca
ctgggggcgaaggcttggcctgccctcttcactgctgtatttccagacctgatgcctgcg
tttgctgagtttgagaaagctgcagaggaggttaggcaccttaagaccaagccatcggat
gaggagatgctgttcatctatggccactacaaacaagcaactgtgggcgacataaataca
gaacggcccgggatgttggacttcacgggcaaggccaagtgggatgcctggaatgagctg
aaagggacttccaaggaagatgccatgaaagcttacatcaacaaagtagaagagctaaag
aaaaaatacgggatatga

>gi568815596f:119267585_119472315|GENSCAN_predicted_peptide_4|145_aa
MAIIYDLKKQKDKLLRLYTESDEQKKLMKHRKTLHKAKNEDPNCVLKEWIYQHCHEHTPL
NGMLIMIQAKMCHNELKIKGNCKYSTDSLQKCKKRHNITFLKISGDETSADHKAVEEFTD
EFAKVIADENLMPGRVYNADEASLF

>gi568815596f:119267585_119472315|GENSCAN_predicted_CDS_4|438_bp
atggccattatatatgacctgaagaaacagaaggataaactgttgaggctctacactgag
agtgatgaacagaagaagttaatgaaacatagaaaaacactgcataaagctaaaaatgaa
gatcccaattgtgtattgaaagagtggatctatcagcattgccatgaacacacgcccctt
aatggtatgctgatcatgatacaagcaaagatgtgtcacaatgaactaaaaattaaaggg
aactgtaaatattcaacagattctttgcagaaatgtaagaaaagacataacattacattt
ttaaagatttctggtgatgaaacatctgctgatcacaaagcagtggaggaattcactgat
gagtttgccaaggtcattgctgatgaaaatctgatgccaggacgagtctataatgctgat
gaagcatcattgttttag

>gi568815596f:119267585_119472315|GENSCAN_predicted_peptide_5|378_aa
MAWGLGEEEDLVGKGGAAGGEEREEAMGHRQGKTWREAGLSKLEQESNPQALVAVPALEE
SAPQAKLSSEVRERRSDFPILSPGTRGIPPPKCRVLPAAPQGLLRPPSLTQPAAPPLRRS
PGLAPAATAEQLERSRLQRGRRAQHDCRRRAETEAGCMLKVMGCRHDRFSELRTDSDLPV
GLDFSPTLKITKERKAQRPLGQRQPRRSFFESFIRTLIITCVALAVVLSSVSICDGHWLL
AEDRLFGLWHFCTTTNQTICFRDLGQAHVPGLAVGMGLVRSVGALAVVAAIFGLEFLMVS
QLCEDKHSQCKWVMGSILLLVSFVLSSGGLLGFVILLRNQVTLIGFTLMFWCEFTASFLL
FLNAISGLHINSITHPWE

>gi568815596f:119267585_119472315|GENSCAN_predicted_CDS_5|1137_bp
atggcgtgggggctgggagaagaggaagacctggttggtaaaggcggggcagcaggagga
gaggagagggaagaggccatgggccacagacaaggcaagacctggagagaggctggactc
agcaagctggaacaggaatcgaaccctcaggccctcgtcgccgtcccagccctcgaggaa
tctgcgccccaggcgaagctgtcctcggaggttcgggagcgtcggagtgacttcccgatc
ctttcccctgggacccgagggatccctccccccaagtgccgggtcctccccgcggctccc
caggggctcctccggccgccctcgctgactcagccagccgccccgcccctgcggagaagt
cccgggctggcgccggcggccacagcggagcagctggagcgatcgaggctgcagcgcggc
cgccgggcgcagcatgactgccgtcggcgtgcagaaaccgaggcaggctgcatgctcaag
gtcatgggatgcaggcacgacaggttttctgaactcagaactgactcagatttgccagtc
ggtttggacttctcacccactctgaagatcacaaaagaaagaaaggcccagaggcctttg
ggccaaaggcagccccgccggtccttctttgaatccttcatccggaccctcatcatcacg
tgtgtggccctggctgtggtcctgtcctcggtctccatttgtgatgggcactggctcctg
gctgaggaccgcctcttcgggctctggcacttctgcaccaccaccaaccagacgatctgc
ttcagagacctgggccaggcccatgtgcccgggctggccgtgggcatgggcctggtacgc
agcgtgggcgccttggccgtggtggccgccatttttggcctggagttcctcatggtgtcc
cagttgtgcgaggacaaacactcacagtgcaagtgggtcatgggttccatcctcctcctg
gtgtctttcgtcctctcctccggcgggctcctgggttttgtgatcctcctcaggaaccaa
gtcacactcatcggcttcaccctaatgttttggtgcgaattcactgcctccttcctcctc
ttcctgaacgccatcagcggccttcacatcaacagcatcacccatccctgggaatga

>gi568815596f:119267585_119472315|GENSCAN_predicted_peptide_6|305_aa
HSYLLKLKVMYTVGYSSSLVMLLVALGILCAFRRLHCTRNYIHMHLFVSFILRALSNFIK
DAVLFSSDDVTYCDAHRAGCKLVMVLFQYCIMANYSWLLVEGLYLHTLLAISFFSERKYL
QGFVAFGWGSPAIFVALWAIARHFLEDVGCWDINANASIWWIIRGPVILSILINFILFIN
ILRILMRKLRTQETRGNEVSHYKRLARSTLLLIPLFGIHYIVFAFSPEDAMEIQLFFELA
LGSFQGLVVAVLYCFLNGEVQLEVQKKWQQWHLREFPLHPVASFSNSTKASHLEQSQGTC
RTSII

>gi568815596f:119267585_119472315|GENSCAN_predicted_CDS_6|918_bp
cactcctacctgctgaagctgaaagtcatgtacaccgtgggctacagctcctccctggtc
atgctcctggtcgcccttggcatcctctgtgctttccggaggctccactgcactcgcaac
tacatccacatgcacctgttcgtgtccttcatccttcgtgccctgtccaacttcatcaag
gacgccgtgctcttctcctcagatgatgtcacctactgcgatgcccacagggcgggctgc
aagctggtcatggtgctgttccagtactgcatcatggccaactactcctggctgctggtg
gaaggcctctaccttcacacactcctcgccatctccttcttctctgaaagaaagtacctc
cagggatttgtggcattcggatggggttctccagccatttttgttgctttgtgggctatt
gccagacactttctggaagatgttgggtgctgggacatcaatgccaacgcatccatctgg
tggatcattcgtggtcctgtgatcctctccatcctgattaatttcatccttttcataaac
attctaagaatcctgatgagaaaacttagaacccaagaaacaagaggaaatgaagtcagc
cattataagcgcctggccaggtccactctcctgctgatccccctctttggcatccactac
atcgtcttcgccttctccccagaggacgctatggagatccagctgttttttgaactagcc
cttggctcattccagggactggtggtggccgtcctctactgcttcctcaatggggaggtg
cagctggaggttcagaagaagtggcagcaatggcacctccgtgagttcccactgcacccc
gtggcctccttcagcaacagcaccaaggccagccacttggagcagagccagggcacctgc
aggaccagcatcatctga