GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:16:16

Sequence gi568815596f:105755064_105993173 : 238110 bp : 44.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5224   5302   79  0  1   97   63    10 0.243   0.62
 1.02 Intr +   9302   9442  141  0  0   89   99    46 0.386   6.12
 1.03 Intr +  18263  18428  166  0  1   92   93    21 0.161   2.02
 1.04 Intr +  30495  30605  111  0  0   61   85    90 0.127   5.49
 1.05 Term +  32025  32214  190  0  1  113   47    65 0.119   1.82
 1.06 PlyA +  34563  34568    6                               1.05

 2.04 PlyA -  34999  34994    6                               1.05
 2.03 Term -  35114  35047   68  0  2   64   31    88 0.393  -1.20
 2.02 Intr -  35772  35684   89  2  2   88   92    52 0.217   5.21
 2.01 Init -  44765  44746   20  2  2  110  110    19 0.701   4.69
 2.00 Prom -  50090  50051   40                              -3.06

 3.04 PlyA -  50454  50449    6                               1.05
 3.03 Term -  57505  57414   92  2  2   53   55   109 0.518   1.98
 3.02 Intr -  59691  59425  267  1  0   54    3   163 0.269   1.90
 3.01 Init -  64616  64547   70  2  1   51   80    73 0.176   4.15
 3.00 Prom -  73096  73057   40                              -0.96

 4.00 Prom +  79388  79427   40                              -6.06
 4.01 Init + 100001 100226  226  1  1   62   95   445 0.988  41.23
 4.02 Intr + 115016 115114   99  0  0   63   33    87 0.029   0.78
 4.03 Intr + 126265 126986  722  2  2  110  123  1527 0.892 149.55
 4.04 Term + 137919 138113  195  2  0  127   49   399 0.978  37.31
 4.05 PlyA + 138670 138675    6                               1.05

 5.00 Prom + 152830 152869   40                              -0.96
 5.01 Init + 162194 162274   81  1  0   86   20   107 0.246   2.67
 5.02 Intr + 164294 164372   79  1  1  107   87    31 0.214   4.02
 5.03 Term + 184385 184536  152  0  2  117   42   114 0.046   7.77
 5.04 PlyA + 186246 186251    6                               1.05

 6.04 PlyA - 186730 186725    6                               1.05
 6.03 Term - 201055 200918  138  1  0   51   37   146 0.303   3.76
 6.02 Intr - 206882 206744  139  1  1   68   94    57 0.207   4.77
 6.01 Intr - 237565 237442  124  2  1   71  100    62 0.307   5.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:105755064_105993173|GENSCAN_predicted_peptide_1|228_aa
MGFPECGPGLWRNANSGELPDFPRGIGLSELHMFIAGHPPRTASLQEPAACSASRLSHKA
ASKPDGLPHLTETATRLRQTCLLAVWYTCRPPSVHAPLLMLVFHPWNASLFPTCSAQGHH
HCTWNLLGRFPAVNSKGKGPISNSTNRVEATGLALSHLNIRSGVCRRGGTGQLLLLPLPS
PLTLSPEHSAGFLFSGLVVLTLKEAQLSAVEGAGPSLSSDMVISVGLG

>gi568815596f:105755064_105993173|GENSCAN_predicted_CDS_1|687_bp
atggggtttccagaatgtggtcctgggctgtggagaaatgcaaattccggggaactgcct
gacttcccgcgtgggatagggctgtctgagctccacatgtttatcgccggccaccctcct
aggactgcatccctgcaggagcctgcagcctgctctgcttcgaggctcagccacaaagct
gcctcaaaacctgatggcctgcctcatctgactgagacagccacccgcttgaggcagacc
tgtcttctcgccgtctggtacacgtgccggcctccatcagtccatgcacctttgctcatg
ctggtttttcatccctggaatgcctccttgtttcccacatgctcagctcagggccatcac
cactgcacctggaacctgctgggcaggtttcccgctgtgaacagtaaagggaaaggccca
atctccaatagcaccaatagagtggaagccacaggattggctctgagccacctcaacatc
cgctcaggtgtttgcaggcgtggtggcactgggcagctgctgttactcccactgccctca
cctttgaccctcagccctgagcactcagctggatttctcttttctgggttggttgtcctc
acactgaaggaagctcagctcagcgccgtggaaggggcaggacccagtctcagctctgac
atggtcatatctgtaggcttgggctga

>gi568815596f:105755064_105993173|GENSCAN_predicted_peptide_2|58_aa
MAEGKASSKAVPSTQVLPMCISWQRETHLDSSLKETGLFVGFDEEETAARIFSSQINF

>gi568815596f:105755064_105993173|GENSCAN_predicted_CDS_2|177_bp
atggcggaggggaaggccagctcaaaggccgttccctccacccaagtcttgcctatgtgc
atcagctggcagcgagagacccacctggacagcagccttaaagaaacaggtctatttgtg
ggctttgatgaagaagaaacggctgcccgtatttttagctcacaaatcaacttttaa

>gi568815596f:105755064_105993173|GENSCAN_predicted_peptide_3|142_aa
MVSMYRLVYVAPVCWELLQTELLGWILMPKCTEEFTFSVTLKVFPNRLESEESLRPWTPD
EWALHISNLFCMRTEERLLMPTANQKPEQLLYQTPQKNNELDLELESFDTRHRGPAEACK
WISRSEYGGGSASPTQHGVSAV

>gi568815596f:105755064_105993173|GENSCAN_predicted_CDS_3|429_bp
atggtctccatgtaccgtcttgtctacgtggcacccgtgtgttgggagctcctgcagact
gagctgctgggatggattctaatgcccaaatgtacagaggagttcactttctcagtgaca
ctaaaggtttttcccaaccgactggagagtgaggaatcacttaggccttggactccggat
gagtgggctttgcacatctctaatctcttctgcatgcgaacagaggagagactccttatg
ccaacagcaaaccaaaagcctgagcagcttctctaccagaccccgcaaaagaacaatgag
ctggatttagaacttgagtcctttgatactaggcacagaggcccagcagaggcctgcaag
tggatctcccgttcagagtacggaggcggcagtgccagcccaacacagcacggggtcagc
gctgtctga

>gi568815596f:105755064_105993173|GENSCAN_predicted_peptide_4|413_aa
MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKN
SLKKGSLVKNLKDTLELVPGVPTHWQRDYLRIEMLEDTRPHLYGLKSISLGKTRRKTSAR
DASPTPSTDAEYPANGSGADRIYDLNIPAFVKFAYVAEREDELSLVKGSRVTVMEKCSDG
WWRGSYNGQIGWFPSNYVLEEVDEAAAESPSFLSLRKGASLSNGQGSRVLHVVQTLYPFS
SVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGPALHPAHAP
QISYTGPSSSGRFAGREWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKAS
GKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPIFTSEHGEKLYLVRALQ

>gi568815596f:105755064_105993173|GENSCAN_predicted_CDS_4|1242_bp
atgacagaagaagttattgtgatagccaagtgggactacaccgcccagcaggaccaggag
ctggacatcaagaagaacgagcggctgtggttgctggacgactccaagacgtggtggcgg
gtgaggaacgcggccaacaggacgggctatgtaccgtccaactacgtggagcggaagaac
agcctgaagaagggctccctcgtgaagaacctgaaggacacactagagctggttcctggt
gtgcccacccactggcaaagggactacctgcgcatagagatgttggaagacactcggccc
cacctgtatgggctgaagtccatcagcctcggcaagacgcgcaggaagaccagcgcgcgg
gatgcgtcccccacgcccagcacggacgccgagtaccccgccaatggcagcggcgccgac
cgcatctacgacctcaacatcccggccttcgtcaagttcgcctatgtggccgagcgggag
gatgagttgtccctggtgaaggggtcgcgcgtcaccgtcatggagaagtgcagcgacggt
tggtggcggggcagctacaacgggcagatcggctggttcccctccaactacgtcttggag
gaggtggacgaggcggctgcggagtccccaagcttcctgagcctgcgcaagggcgcctcg
ctgagcaatggccagggctcccgcgtgctgcatgtggtccagacgctgtaccccttcagc
tcagtcaccgaggaggagctcaacttcgagaagggggagaccatggaggtgattgagaag
ccggagaacgaccccgagtggtggaaatgcaaaaatgcccggggccaggtgggcctcgtc
cccaaaaactacgtggtggtcctcagtgacgggcctgccctgcaccctgcgcacgcccca
cagataagctacaccgggccctcgtccagcgggcgcttcgcgggcagagagtggtactac
gggaacgtgacgcggcaccaggccgagtgcgccctcaacgagcggggcgtggagggcgac
ttcctcattagggacagcgagtcctcgcccagcgacttctccgtgtcccttaaagcgtca
gggaagaacaaacacttcaaggtgcagctcgtggacaatgtctactgcattgggcagcgg
cgcttccacaccatggacgagctggtggaacactacaaaaaggcgcccatcttcaccagc
gagcacggggagaagctctacctcgtcagggccctgcagtga

>gi568815596f:105755064_105993173|GENSCAN_predicted_peptide_5|103_aa
MAAPSLLLTCLPTSLSLQWAGKGQKGARSLGYVLGLEPKPKLSAMTQLSYCVSSACLSNP
PTGGHKLGIMAQDEACLEEGIILHEIVDPDNNQQQMLEYLSKG

>gi568815596f:105755064_105993173|GENSCAN_predicted_CDS_5|312_bp
atggcagctccttccctgctcctcacctgcctccccacctccctctcactgcaatgggct
ggaaaggggcagaaaggcgcaaggtccctgggctacgtccttgggttggaacccaagcca
aagctaagtgcaatgacacaattgagctattgtgtgagctctgcctgcctgtccaaccca
cccacaggtggccacaaacttgggatcatggcccaggatgaggcctgtttagaagaaggt
attattcttcatgagatcgtggatccagacaataatcaacaacagatgctagaatactta
agcaagggatga

>gi568815596f:105755064_105993173|GENSCAN_predicted_peptide_6|133_aa
XCIGPRLSMGSGIQLLLLVYTSITGSIQLTDLIKGGNGTYAHFCSLERDNTPLRKRLVLR
VRTAPGFCNQLQPPESSSGEEVIEESFQKWTGKREQMPCADVAEEQKSKPAKHSRSPFYK
SLNPTYGKKAAMV

>gi568815596f:105755064_105993173|GENSCAN_predicted_CDS_6|402_bp
ngatgcattggccctcggttatctatgggctcaggcatccagctactgttgttggtgtac
acctcaataacaggatccatccaactcacagacctaattaaaggaggaaatgggacatat
gcccacttttgctcgttggagagggataacacaccgctaagaaaaagacttgttctgaga
gtgaggactgcccccggattttgtaaccagttgcaaccacctgaaagcagctctggggaa
gaggtcattgaagagtctttccagaagtggacgggcaagagagaacaaatgccgtgtgct
gatgtggcagaagagcagaagagcaagccagccaaacacagccggagccccttttataag
agccttaatcccacttacgggaaaaaagctgccatggtctaa