GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:18:20

Sequence gi568815595r:195416899_195643025 : 226127 bp : 44.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  25678  26117  440  0  2   41   -8   350 0.933  14.29
 1.02 Term +  26157  26280  124  0  1   54   53   180 0.521   8.96
 1.03 PlyA +  28523  28528    6                               1.05

 2.00 Prom +  38719  38758   40                              -5.76
 2.01 Init +  48719  48878  160  1  1   68   63   156 0.506  11.09
 2.02 Term +  57316  57437  122  2  2   68   55    64 0.299  -0.26
 2.03 PlyA +  58191  58196    6                               1.05

 3.05 PlyA -  59126  59121    6                               1.05
 3.04 Term - 100044  99998   47  1  2  131   42    19 0.783  -1.03
 3.03 Intr - 102287 102120  168  0  0   62   72   152 0.884  10.92
 3.02 Intr - 106888 106794   95  0  2   46   53   124 0.999   4.31
 3.01 Init - 107994 107921   74  0  2   62  100   100 0.932   9.14
 3.00 Prom - 111432 111393   40                              -3.56

 4.05 PlyA - 111571 111566    6                               1.05
 4.04 Term - 121175 121167    9  2  0   98   43     0 0.173  -5.31
 4.03 Intr - 126268 126006  263  2  2    7   83   388 0.566  27.41
 4.02 Intr - 133305 133236   70  0  1   59   86    48 0.542   0.45
 4.01 Init - 148961 148731  231  2  0   48   98   115 0.698   6.76
 4.00 Prom - 149604 149565   40                              -5.06

 5.05 PlyA - 150256 150251    6                               1.05
 5.04 Term - 152237 152002  236  0  2  102   41   281 0.843  21.28
 5.03 Intr - 154467 154379   89  2  2   74   78    68 0.991   4.01
 5.02 Intr - 157073 156952  122  2  2   78  105   100 0.995   9.99
 5.01 Init - 162563 162441  123  2  0   93   93   201 0.980  19.29
 5.00 Prom - 173239 173200   40                              -4.66

 6.00 Prom + 191739 191778   40                              -3.36
 6.01 Sngl + 201759 203219 1461  2  0   60   49  1046 0.286  92.63
 6.02 PlyA + 204240 204245    6                               1.05

 7.07 PlyA - 205978 205973    6                               1.05
 7.06 Term - 208056 207783  274  2  1   77   43   118 0.237   1.14
 7.05 Intr - 209464 209361  104  1  2   53   94    35 0.414  -0.43
 7.04 Intr - 209883 209752  132  0  0  102   76    42 0.615   5.24
 7.03 Intr - 211609 211474  136  0  1   12   90    95 0.197   2.67
 7.02 Intr - 212375 212190  186  1  0  125   -9   118 0.205   4.60
 7.01 Init - 214866 214736  131  0  2   53   22   162 0.752   3.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 137816 138067  252  1  0   51   47   182 0.932   5.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_1|187_aa
MRGDVPVPATSSPLGRARWGLQCPRRVGNGGNSRSPRRKERTAGPPPGARARLSRPQRRE
GSSAVTPGGRAGYLKRGESFRHSSKSTVIFILPPPRRRRWQSRGGRGSGRAGTQTATAGA
RPRLALRGAAKGASPAGHSSREDGDDYRALAAGKRPGSDSSGQPATNLAAKGRGIRQHRL
RAPGQRV

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_1|564_bp
atgagaggcgacgtccccgtccccgccacttcgtcgcccctcgggagggctcggtgggga
ctgcagtgccctcgcagggtgggaaacggcggcaacagccgctcgccccgtcggaaggag
cggacggcggggcctcctccgggtgcgcgggcccggctttcacgcccccagcgccgggaa
ggcagctccgcggtgacgccgggcggccgtgccggttacctgaagcggggcgagtccttc
agacactcctcgaaatccacagtcatcttcatcctgcctccgcctcgcaggcggcgctgg
caaagccgagggggccgcgggagcggccgcgctgggacgcagacggctacggcgggcgca
cggccgcgactagcgttgcgcggagctgcgaagggcgcctcgcccgctggtcatagcagc
cgcgaagacggcgacgactatagagcgctggccgcagggaaacggccggggagtgacagc
agcggccagccagccacgaacctggcggccaaggggcggggcatccggcagcaccgcctg
cgggcgcccgggcaacgggtctga

>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_2|93_aa
MEEATSQQGPKEVGDSLVDFWGRSSPERENSRCKDPEWKECLDGPGMAVWLEQTPCNVAC
YPQKANEDTLTKITSDLGDPESSEVFLMLALLF

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_2|282_bp
atggaggaggcgacatcccagcagggacccaaggaagtaggagacagccttgtggacttc
tgggggaggagtagtccagaaagagagaacagccggtgcaaagaccctgagtggaaagaa
tgcttggatggtccaggaatggccgtgtggctggagcagaccccgtgcaatgtggcttgc
taccctcaaaaggccaatgaggacactctcactaagatcaccagtgatctaggtgaccct
gaatctagcgaagtctttctcatgttagctctgttgttttga

>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_3|127_aa
MGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKR
QFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQ
QNKLRSS

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_3|384_bp
atgggggatgatgaagatgcctgtagtgacaccgaggccactgaagccatggcgccagac
atcttagccaggaaattagctgcagctgaaggcttggagccaaagtatcggattcaggaa
caagaaagcagtggagaggaggatagtgacctctcacctgaagaacgagaaaaaaagcga
caatttgaaatgaaaaggaagcttcactacaatgaaggactcaatatcaaactagccaga
caattaatttcaaaagacctacatgatgatgatgaagatgaagaaatgttagagactgca
gatggagaaagcatgaatacggaagaatcaaatcaaggatctactccaagtgaccaacag
caaaacaaattacgaagttcatag

>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_4|190_aa
MCPPELATANPQAEQKPLTSMASLDGNDKLRQSNKSLTLSSLERGSLKALVLQGHVACSG
HYRPCTTEVMCAEQKRRPRERKEGLESCLENHLIKTPDNTAVSEAAVAAALALSGICGCL
RVSAVPTLLFADPTPSSDPEPTAGAPGNGGLDGLAPAHQGDLEEQDLYDFLYGGVGRTAP
RECRRGAEGY

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_4|573_bp
atgtgtccacctgagctagcaacagccaatccacaggctgaacagaaacctctgacttct
atggcctcgctggatggaaatgataaactgagacaatcaaataagagtttgactttaagc
agtctggaaagaggatcattgaaagctctggtactgcaaggtcatgtggcttgtagtggc
cactaccggccatgcactactgaagtgatgtgtgcggaacagaaacgcaggccacgggag
cgcaaagagggtcttgagtcctgtctagagaaccacttgataaaaacacctgataacaca
gccgtttccgaggcagcagttgcggccgctttagccctgagcgggatctgcggctgcctg
cgagtctctgctgtgccgacccttctcttcgcggaccccacgccaagcagcgaccctgag
ccgacagccggagcgcccggcaatggcggcctcgacggcctcgcaccggcccatcaaggg
gatcttgaagaacaagacctctacgacttcctctatggtggcgtcggccgaacagccccg
cgggaatgtcgacgaggagctgagggatactga

>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_5|189_aa
MVMLLLLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGR
CIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMPSAPYWI
LATDYENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVT
DQVNCPKLS

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_5|570_bp
atggtgatgctgctgctgctgctttccgcactggctggcctcttcggtgcggcagaggga
caagcatttcatcttgggaagtgccccaatcctccggtgcaggagaattttgacgtgaat
aagtatctcggaagatggtacgaaattgagaagatcccaacaacctttgagaatggacgc
tgcatccaggccaactactcactaatggaaaacggaaagatcaaagtgttaaaccaggag
ttgagagctgatggaactgtgaatcaaatcgaaggtgaagccaccccagttaacctcaca
gagcctgccaagctggaagttaagttttcctggtttatgccatcggcaccgtactggatc
ctggccaccgactatgagaactatgccctcgtgtattcctgtacctgcatcatccaactt
tttcacgtggattttgcttggatcttggcaagaaaccctaatctccctccagaaacagtg
gactctctaaaaaatatcctgacttctaataacattgatgtcaagaaaatgacggtcaca
gaccaggtgaactgccccaagctctcgtaa

>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_6|486_aa
MTTDDTEVPAMTLAPGHAALETQTLSAETSSRASTPAGPIPEAETRGAKRISPARETRSF
TKTSPNFMVLIATSVETSAASGSPEGAGMTTVQTITGSDPREAIFDTLCTDDISEEAKTL
TMDILTLAHTSTEAKGLSSESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESS
ASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGLHPVITPSRASESSASS
DGLHPVITPSRASESSASSDGPHPVITPSWSPGSDVTLLAEALVTVTNIEVINCSITEIE
TTTSSIPGASDTDLIPTEGVKASSTSDPPALPDSTNTKPHITEVTASAETLSTAGTTESA
APDATIGTPLPTNSTIEREVTAPGATTLSGALATGNPLEETSALSVETPSYVKVSGAAPV
SIEAGSAVGKTTSFAGSSASSYSPLEAALKNFTPSETLTTDIATKGPFPTSRAPLPSVPP
TTTNSS

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_6|1461_bp
atgacaacggacgacacagaagtgcccgctatgactctagcaccgggccacgccgctctg
gaaactcaaacgctgagcgctgagacctcttctagggcctcaaccccagccggccccatt
ccagaagcagagaccaggggagccaagagaatttcccctgcaagagagaccaggagtttc
acaaaaacatctcccaacttcatggtgctgatcgccacctccgtggagacatcagccgcc
agtggcagccccgagggagctggaatgaccacagttcagaccatcacaggcagtgatccc
agggaagccatctttgacaccctttgcaccgatgacatctctgaagaggcaaagacactc
acaatggacatattgacattggctcacacctccacagaagctaagggcctgtcctcagag
agcagcgcctcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagc
agcgcctcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagcagc
gcctcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagcagcgcc
tcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagcagcgcctct
tccgacggcctccatccagtcatcaccccgtcacgggcctcagagagcagcgcctcttcc
gacggcctccatccagtcatcaccccgtcacgggcctcagagagcagcgcctcttccgac
ggcccccatccagtcatcaccccctcatggtccccgggatctgacgtcactctcctcgct
gaagccctggtgactgtcacaaacatcgaggttattaattgcagcatcacagaaatagaa
acaacgacttccagcatccctggggcctcagacacagatctcatccccacggaaggggtg
aaggcctcgtccacctccgatccaccagctctgcctgactccactaacacaaaaccacac
atcactgaggtcacagcctctgccgagaccctgtccacagccggcaccacagagtcagct
gcacctgatgccacgattgggaccccactccccaccaacagcaccatagaaagagaagtg
acagcacccggggccacgaccctcagtggagctctggccacagggaatcccctggaagaa
acctcagccctctctgttgagacaccaagttacgtcaaagtctcaggagcagctccggtc
tccatagaggctgggtcagcagtgggcaaaacaacttcctttgctgggagctctgcttcc
tcctacagccccttggaagccgccctcaagaacttcaccccttcagagacactgaccacg
gacatcgcaaccaaggggcccttccccaccagcagggcccctcttccttctgtccctccg
actacaaccaacagcagctga

>gi568815595r:195416899_195643025|GENSCAN_predicted_peptide_7|320_aa
MGLPGLPGVAGGRVGEDGASVCMCESLKDGMSVKMASPSRGCLPAVCLGPGVRNGQFFNT
VSGSGRPEGSQALSPWRAFCGLSQGSRQEPGENRCVCSRRALMPLRDTERPTVCFAGTVQ
CSQGKSCIRHAGAVAAPAENQSLIFGVRKVEAPSPNTIALGVRISTDEFRGTRTFKPSQS
PTHQGESVWREDIREPPGLWSPWSVVLAYGSPTAPVRWEETADTMRRHHTLRRKPPGGLW
GLRSVPGVPGSCLNAHSGSCPAASAPRPRPRAGSAPWCRLGSVQGRAGCAEHLQAPPWVT
EDRGADQVFYRSVGDQQLDA

>gi568815595r:195416899_195643025|GENSCAN_predicted_CDS_7|963_bp
atgggacttcctggcctgcccggggtggcgggggggcgggtgggagaggacggagcgtct
gtgtgcatgtgtgagagcctcaaggacggcatgtctgtgaagatggcttcacccagccgc
ggctgccttccagccgtgtgtctagggcccggggtgcggaacgggcagttcttcaacaca
gtgagcggcagcgggcgtcccgaaggttctcaggccttgtctccgtggagggcattttgt
ggcctctcccagggcagccggcaggagccaggcgagaacagatgcgtctgtagcaggagg
gcgttgatgcctctgagagatacagagcgacccaccgtctgctttgctgggactgtccag
tgttcgcagggaaagtcctgcatccggcacgctggggcggtggctgcaccagctgagaac
cagtctctgattttcggggtgagaaaagtagaggccccatctcctaacaccatcgccttg
ggggtgaggatttcaacagatgaatttcggggaacacggacattcaaaccctcacaaagc
cccacccaccaaggagagtctgtctggagagaagacattagggagccaccagggttgtgg
agcccctggtctgtggtgctggcttatggcagccctactgccccagtgagatgggaagag
acagcagacacaatgagaagacaccacacgctcaggcggaaaccccccgggggcctctgg
gggctgcggtcggtgccaggggtcccgggcagctgcctgaacgcgcacagcggctcctgc
cccgcagcctccgccccgcgcccgcgtcctcgggccggcagcgccccctggtgccgcctc
gggtctgtgcagggccgggcgggctgcgcggagcacctgcaggcgcctccatgggtgacg
gaagacagaggggctgaccaggtcttctacaggtcagtgggcgatcaacagctggacgcg
tag