GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:39:57

Sequence gi568815595r:185818363_186026735 : 208373 bp : 42.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2085   2080    6                               1.05
 1.02 Term -   6229   6141   89  2  2  107   50    39 0.379  -1.16
 1.01 Init -   6595   6421  175  1  1   64   88   305 0.890  27.66
 1.00 Prom -  22982  22943   40                              -5.05

 2.03 PlyA -  23728  23723    6                               1.05
 2.02 Term -  29970  29665  306  0  0   10   50   223 0.625   4.83
 2.01 Init -  30898  30851   48  1  0   52   91    37 0.829   1.40
 2.00 Prom -  40464  40425   40                              -5.15

 3.00 Prom +  43704  43743   40                              -4.35
 3.01 Init +  47291  47366   76  1  1   41   91    41 0.423   1.00
 3.02 Term +  51508  51635  128  2  2   76   46   112 0.697   3.26
 3.03 PlyA +  51752  51757    6                               1.05

 4.11 PlyA -  51869  51864    6                               1.05
 4.10 Term -  73257  73082  176  1  2   64   54    82 0.149  -0.66
 4.09 Intr -  82148  81963  186  0  0   25   70   164 0.471   7.04
 4.08 Intr - 100076 100003   74  1  2   26   99    85 0.617   1.53
 4.07 Intr - 102825 102742   84  2  0   72  111   146 0.968  13.32
 4.06 Intr - 103764 103649  116  0  2   40   94    53 0.976  -0.57
 4.05 Intr - 105622 105434  189  1  0   93  100   143 0.997  14.86
 4.04 Intr - 107264 107102  163  1  1  113   94   163 0.999  18.46
 4.03 Intr - 108372 108239  134  0  2   20   82   111 0.877   2.22
 4.02 Intr - 119561 119463   99  2  0  -15   87   196 0.037   8.59
 4.01 Init - 141678 141592   87  0  0   47   85    95 0.120   5.79
 4.00 Prom - 143287 143248   40                              -5.35

 5.00 Prom + 143606 143645   40                              -7.35
 5.01 Init + 149975 150169  195  1  0   85   36    81 0.453   1.59
 5.02 Intr + 150221 150355  135  1  0   -1   42   191 0.506   5.44
 5.03 Intr + 153253 153502  250  0  1   71   33   407 0.690  29.59
 5.04 Intr + 156804 156994  191  1  2   66  113   176 0.737  16.28
 5.05 Term + 161296 161475  180  0  0   67   43   201 0.992  10.13
 5.06 PlyA + 162487 162492    6                               1.05

 6.00 Prom + 163466 163505   40                              -9.85
 6.01 Init + 165734 165980  247  1  1   26   38   281 0.547  12.71
 6.02 Intr + 168001 168243  243  2  0   32    9   236 0.775   6.65
 6.03 Intr + 168679 169023  345  2  0   64   30   178 0.636   4.04
 6.04 Intr + 174462 174665  204  1  0   34   78   120 0.629   3.85
 6.05 Term + 174847 175004  158  2  2   44   42   159 0.639   4.01
 6.06 PlyA + 177718 177723    6                               1.05

 7.03 PlyA - 179090 179085    6                               1.05
 7.02 Term - 180828 180696  133  2  1   44   46   102 0.132  -1.82
 7.01 Init - 188682 187556 1127  0  2   60   53   217 0.611   9.10
 7.00 Prom - 190046 190007   40                              -4.85

 8.02 PlyA - 190613 190608    6                               1.05
 8.01 Term - 207337 207194  144  1  0  103   37   101 0.570   3.43

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 125197 125375  179  1  2   71   66   160 0.842  10.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_1|87_aa
MNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSAL
DSALALGAAALGRPPCRSEGSRGSPAP

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_1|264_bp
atgaacaagctttacatcgggaacctgagccccgccgtcaccgccgacgacctccggcag
ctctttggggacaggaagctgcccctggcgggacaggtcctgctgaagtccggctacgcc
ttcgtggactaccccgaccagaactgggccatccgcgccatcgagaccctctcggctctg
gactctgccctcgccctcggggccgcagccttggggcgccccccgtgccgctccgaaggc
tcccgaggctcgccggctccttag

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_2|117_aa
MLTESKLQMVPKGALQDKNPEKEASRGAQRAGSLQTLHHWGNPNGSRAPRDPSCLIGNPT
KPSADSGEPALRRASLSPGSSFSEAVFVLQCVHTVPYSSFNKPPLKQHVSVFKFTKM

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_2|354_bp
atgcttacagaaagtaaactacaaatggttcctaaaggagcccttcaggacaaaaacccg
gaaaaggaagctagcagaggggctcagagggcaggcagcctgcagacgctccatcactgg
ggcaatccaaatggcagccgggctccccgggacccttcatgtctgattggaaatcctacc
aaaccctctgctgattcaggagagcctgcgttgcggagggcctctctgagccctggctcc
agcttttctgaggctgtgttcgttttgcagtgtgtccatacggttccttactcctctttc
aataaacccccattgaaacagcacgttagtgtattcaagttcactaagatgtag

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_3|67_aa
MSYNRTTGYNAAIKMLILKAKKNKHDIPSRSPLITRRLERPYGNTPADRQLQLSQPHTRH
MGDETPR

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_3|204_bp
atgtcctacaataggacaacaggatataatgcagccattaaaatgttaattttgaaggct
aagaaaaataagcatgatattccctctaggagcccactcatcacacgtcgtttggagagg
ccctacggaaacacaccagctgacaggcagcttcagttatcccagccccacaccagacat
atgggggatgaaacccccagatga

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_4|435_aa
MLSGKERVSGVTELSLEQRHQPKCCVSSLEGARGWQLRLKHIDRRQQPGVMSDSGEQNYG
ERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTR
SRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTT
ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR
VDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRRRSPSPYYS
RGGYRSRSRSRSYSPPESRRVSSESLPDRKLLTPGTSRLLTQAKGSSKPSSPSVHESSQQ
PLEQGQAYKWPFMPLTKSLLPHPPYIRQQISTGLPSSEKVYLCQSVGRHKLPYLKDPPAQ
EFCSHPPSAVAFGGY

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_4|1308_bp
atgttatcaggaaaagagagagtcagtggagtaacagaactttccctggagcagcgacac
cagccgaaatgctgtgtttcttctctggaaggtgcaagaggttggcagcttcgattgaag
cacatcgaccggcgacagcagccaggagtcatgagcgacagcggcgagcagaactacggc
gagcgggaatcccgttctgcttccagaagtggaagtgctcacggatcggggaaatctgca
aggcatacccctgcaaggtctcgctccaaggaagattccaggcgttccagatcaaagtcc
aggtcccgatctgaatctaggtctagatccagaagaagctcccgaaggcattatacccgg
tcacggtctcgctcccgctcccatagacgatcacgtagcaggtcttacagtcgagattat
cgtagacggcacagccacagccattctcccatgtctactcgcaggcgtcatgttgggaat
cgggcaaatcctgatcctaactgttgtcttggagtatttgggctgagcttgtacaccaca
gaaagagatctaagagaagtgttctctaaatatggtcccattgccgatgtgtctattgta
tatgaccagcagtctaggcgttcaagaggatttgcctttgtatattttgaaaatgtagat
gatgccaaggaagctaaagaacgtgccaatggaatggagcttgatgggcgtaggatcaga
gttgatttctctataacaaaaagaccacatacgccaacaccaggaatttacatggggaga
cctacctatggcagctctcgccgtcgggattactatgacagaggatatgatcggggctat
gatgatcgggactactatagcagatcatacagaaggcggtcaccttctccttactatagt
cgtggaggatacagatcacgttccagatctcgatcatactcacctccagaaagtaggagg
gtgtccagtgagtcactccctgaccggaaactgctgacaccaggcaccagcaggttgctg
actcaggccaaggggagctccaagccctcatcaccctcagtgcatgaatcttcacagcag
ccattggagcagggccaggcttacaaatggcctttcatgccacttaccaagagtttgctt
ccacaccctccatatatcaggcagcaaatatcaacagggctgccatcttcagaaaaggtc
tatctatgtcagagtgttgggcggcataagctaccctaccttaaggatcctcctgcccag
gaattttgcagccatcctccttcagctgtagccttcgggggctactga

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_5|316_aa
MGICEGPCSTPCSRYCSSSTLNYEISDLLSVNILPDPSCVSSSLDPAGAQGGSVARAILE
SKKFARLGAEVVKGDLNDKASVDSALKGVYGAFLVTNFWDPLNQDKEVCRGKLVADSAKH
LGLKHVVYSGLENVKRLTDGKLEVPHFDSKGEVEEYFWSIGIPMTSVRVAAYFENFLAAW
RPVKASDGDYYTLAVPMGDVPMDGISVADIGAAVSSIFNSPEEFLGKAVGLSAEALTIQQ
YADVLSKVLGKEVRDAKITPEAFEKLGFPAAKEIANMCRFYEMKPDRDVNLTHQLNPKVK
SFSQFISENQGAFKGM

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_5|951_bp
atggggatatgtgaagggccatgtagcaccccctgcagtaggtactgcagcagctctact
ctgaattatgagatttctgaccttctttcagtgaacattcttcctgatccttcctgtgtt
tcttcttctcttgaccctgcaggagctcaaggtggctctgtggccagggcaattttggag
agcaaaaaatttgcacgccttggagctgaggtggtcaaaggtgacctgaatgataaagca
tcggtggacagtgccttaaaaggtgtctatggggccttcttggtgaccaacttctgggac
cctctcaaccaagataaggaagtgtgtcgggggaagctggtggcagactccgccaagcac
ctgggtctgaagcacgtggtgtacagcggcctggagaacgtcaagcgactgacggatggc
aagctggaggtgccgcactttgacagcaagggcgaggtggaggagtacttctggtccatt
ggcatccccatgaccagtgtccgcgtggcggcctactttgaaaactttctcgcggcgtgg
cggcccgtgaaagcctctgatggagattactacaccttggctgtaccgatgggagatgta
ccaatggatggtatctctgttgctgatattggagcagccgtctctagcatttttaattct
ccagaggaatttttaggcaaggccgtggggctcagtgcagaagcactaacaatacagcaa
tatgctgatgttttgtccaaggttttggggaaagaagtccgagatgcaaagattaccccg
gaagctttcgagaagctgggattccctgcagcaaaggaaatagccaatatgtgtcgtttc
tatgaaatgaagccagaccgagatgtcaatctcacccaccaactaaatcccaaagtcaaa
agcttcagccagtttatctcagagaaccagggagccttcaagggcatgtag

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_6|398_aa
MLVLLLLASPLATLLVILSPTQGTFATLKSHQDYTRGRDNSLKGNWGTVRKCVLNGPQAL
SILPSNRAEHSGNVVLTWTPHRKRECGATVSSGYRQGRGSAWLTGGKTGVTGLSVEALRG
NRESPQEVLGDQTQRFPRAGLVDEGNKPDVAQKGVVATVPTGDRLIPEPSDFVEGLGLGE
AVGIVSDWPDHEGKEHPQNARVLLFGSGELLGVIIAAIITLISTVFLCPFYREVVGVGCG
VKGLRSLSAGLTPICVITNKAFPHCFWQMFGHGEKKEAKKYFPCSSDCVIHMSHHQQPKA
SSEAAEHFSSKTALCDPRSACSAEITCVWHRPSLLILAGFQGVKKLGFNSQGGKKDVLGS
GGIGAMWVVLEGFGMPNRLGSLRFHPHNISQAMRRPLL

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_6|1197_bp
atgctggtgctcctgctgctggcttctccgctggccacactgcttgtcatcctctcccca
acccaagggacctttgcaactctgaaatcccatcaagactacacaaggggcagagacaat
tcactaaaaggaaactggggcactgttaggaagtgcgtattgaacggccctcaggcactg
tccattctcccaagtaacagagcagaacactctggcaatgtagtcctgacttggactcct
cataggaaaagagaatgcggagccacggtgtcctcaggctaccggcaaggccgtggatct
gcgtggctaacggggggcaagacaggggtcacggggctgagtgtggaagccctgcgtgga
aatcgagagagccctcaggaggtcttgggggatcaaacccaaaggtttccaagagccggg
ctggtagatgaaggaaacaagccagatgtagcacagaagggagtggtggcgactgtaccg
acaggagaccgattaattcctgaaccctctgattttgtggaagggctgggacttggtgaa
gctgtaggtatcgtgagtgactggcctgatcacgaggggaaggagcacccacagaatgcc
agggtcctcctctttggcagtggggaactattgggtgttattatagcagctatcatcacc
ttaatcagtacagtatttttatgccccttttatagagaagtagtgggtgttggctgtggg
gtgaaggggttgaggagcttgtcagcaggcctcactcctatctgtgttattacaaataaa
gcattccctcattgcttctggcaaatgtttggccatggggaaaagaaagaagcaaaaaaa
tactttccatgctcctctgactgtgtcatccacatgagccaccaccagcagcccaaagcc
agttccgaagcagcagaacatttttcgagcaaaacagcactctgtgaccctcggagtgct
tgttcagctgaaattacttgtgtctggcacagaccttctcttttgattttggcaggattt
cagggagtgaaaaagctagggtttaacagccaaggagggaagaaggatgtgctggggagc
gggggaataggggccatgtgggtagtgctggaaggattcgggatgccgaacaggcttggc
tccttgcggttccacccccacaacatctctcaagccatgcgccgtcctctcctctag

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_7|419_aa
MSELPFTIASKRIKYLGIQLTRDVKDLCKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KMAILPKVIYRFNAIPIKLPMSFFTELEKTTLKFIWHQKRAHITKSILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDLWNRTEPSEITPHIYNYLIFDKPEKNKQWGKHSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLHVRPKTIKTIEENLGITIQDIGMGKD
FMSKTPKAMATKAKIDKWDLIELKSFCTAKETTIRVNRQPTKWEKIFTTYSSDKGLISRI
YNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQTKTTMRYH
LTPVRMAIIKKSGNNRPKTAKVVGNLALSHIAGGDVNWYKLFGRNLAECIKNYKKVCIL

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_7|1260_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggacgtgaaggacctctgcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatattgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgagtttcttcacagaattggaaaaaactactttaaagttcatatggcaccaaaaaaga
gcccacatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtattggtaccaaaac
agagatatagatctatggaacagaacagagccctcagaaataacaccgcatatctacaac
tatctgatctttgacaaacctgagaaaaacaagcaatggggaaagcattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttacatgttagacctaaaacc
ataaaaaccatagaagaaaacctaggcattaccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaatagacaaatgggatcta
attgaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acaaaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcg
aaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaa
aaatgctcaccatcactggctatcagagaaatgcaaaccaaaaccacaatgagataccat
ctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagacccaaaactgcc
aaggttgtgggaaacctggcactctcacacattgctggtggcgatgtaaattggtacaaa
ctttttggaagaaatctggcagaatgtatcaagaattataaaaaagtgtgtatcttgtga

>gi568815595r:185818363_186026735|GENSCAN_predicted_peptide_8|47_aa
DVSLKFPVVVNQGKYCPQKKWQMCGGLFNSLKTRGCNCHLVDEDQRC

>gi568815595r:185818363_186026735|GENSCAN_predicted_CDS_8|144_bp
gatgtatcactgaagttcccagtggttgtcaaccaggggaagtactgcccccaaaagaaa
tggcagatgtgtgggggcctttttaatagccttaagacaaggggctgcaactgccattta
gtggatgaggaccagagatgttaa