GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:24:37

Sequence gi568815595r:156709551_156910732 : 201182 bp : 38.72% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 PlyA -   1855   1850    6                               1.05
 1.09 Term -   4743   4334  410  1  2    9   38   330 0.715  14.49
 1.08 Intr -   5352   4787  566  2  2   50   -7   304 0.438   8.61
 1.07 Intr -   8622   8582   41  0  2  106   92    59 0.628   4.20
 1.06 Intr -  10041   9913  129  0  0   59   73    86 0.755   4.17
 1.05 Intr -  31399  31221  179  2  2   47   68   126 0.135   5.22
 1.04 Intr -  32050  31886  165  2  0   43   49   173 0.548   7.91
 1.03 Intr -  32404  32077  328  1  1  101   68   148 0.611   8.45
 1.02 Intr -  41633  41545   89  0  2   63  101    56 0.013   3.17
 1.01 Init -  61950  61857   94  0  1   55   62    82 0.039   2.89
 1.00 Prom -  88193  88154   40                              -4.15

 2.06 PlyA -  89278  89273    6                               1.05
 2.05 Term -  89487  89335  153  0  0   59   42   130 0.353   2.44
 2.04 Intr -  97180  97082   99  1  0  101    3   143 0.525   6.49
 2.03 Intr -  97645  97577   69  1  0   58  103    39 0.628   0.86
 2.02 Intr - 100788  99818  971  1  2   -5  -18   931 0.312  62.98
 2.01 Init - 101182 101092   91  1  1   67   32   146 0.590   7.60
 2.00 Prom - 102717 102678   40                             -10.65

 3.00 Prom + 102772 102811   40                             -11.04
 3.01 Init + 103815 103997  183  2  0  101   30    65 0.430   1.16
 3.02 Term + 106490 106720  231  1  0   71   54   259 0.971  16.29
 3.03 PlyA + 107748 107753    6                               1.05

 4.05 PlyA - 108027 108022    6                               1.05
 4.04 Term - 113612 113284  329  0  2   58   37   157 0.178   1.49
 4.03 Intr - 117354 117082  273  1  0   57   60   145 0.289   5.19
 4.02 Intr - 120774 120622  153  1  0   62   55    87 0.528   1.92
 4.01 Init - 128353 128266   88  1  1   90   90   121 0.928  13.35
 4.00 Prom - 132067 132028   40                              -6.85

 5.00 Prom + 136525 136564   40                              -5.65
 5.01 Init + 139382 139786  405  1  0   41   86   133 0.118   5.04
 5.02 Intr + 143218 143437  220  0  1   72   27   174 0.169   6.65
 5.03 Term + 151766 151881  116  0  2   91   32   107 0.561   3.15
 5.04 PlyA + 152790 152795    6                               1.05

 6.02 PlyA - 152807 152802    6                               1.05
 6.01 Sngl - 166882 166484  399  1  0   77   41   194 0.993   9.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:156709551_156910732|GENSCAN_predicted_peptide_1|666_aa
MSVGYLTGDIKMSVGHLTGGMKTGEIRVDVIDSFGSSAFLSEGLKSLSRISQEKGMRMRV
MTPPSRFASPGKLNCPWSVIPRGQATLGWNFLHCPPVSQQKKPRALPSDVGQHAESPSSC
PSVSGIGGFLVSLTLTMKPRTLAVSVTALKVVRLELVPSDVQMCSEFLPSGVKLQTFAGS
VTALKAVRLEFFIPPGGLVVALASEVKLQTFVVSVTAHKSSVDPKPLGWSMGLGAMEQGV
ALVGEARAAQEPTEGMGGSGMAAAGPEPCPTGRQLRTGEELSAAPKVLSEYIESAITSYH
KLGNYKQQKFISHSLKSGKSKIEVLADLPTQREDDEPHNFVRMYKECLSCWLESGIPNLG
VWPKRIHTTAEKYREYEAREQTDQTQVQELHRSQDRDFETMAKLHIPVMVDEVVHCLSPQ
KGQIFLDMTFGSGGHTKAILQKESDIVLYALDRDPTAYALAEHLSELYPKQIRAMLGQFS
QAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGSSLRKDGPLDIRMDDLLQQSTYIA
TKTFQALRIFVNNELNELYTGLKTAQKFLRLGGRLVALSFHSLEDRIVKRFLLGISMTER
FNLSVRQQVMKTSQLGSDHENTEEVSMRRAPLMWELIHKKVFSPQDQDVQDNPRGRSAKL
RAAIKL

>gi568815595r:156709551_156910732|GENSCAN_predicted_CDS_1|2001_bp
atgtctgttggatatctgactggagatataaagatgtctgttggacatctgactggaggt
atgaagactggagaaataagagtggatgtgattgactcatttggaagcagtgcattttta
tcagagggactgaaaagcctttcgagaatcagtcaagaaaaaggaatgcgcatgagagtc
atgaccccaccttcaaggtttgcttcaccagggaaactcaactgcccctggtctgtgatc
ccaaggggtcaggccactttaggctggaacttcctccactgcccacctgtgagtcaacaa
aagaagccaagagctttaccctcagacgtaggccagcatgctgaaagcccgtcttcctgc
cctagtgtgtctggaattggtgggttcttggtctcactgactttaacaatgaagccgcgg
accctcgcggtgagtgttacagctcttaaggtggtgcgtctggagcttgttccttctgat
gttcagatgtgttcggagtttcttccttctggagtgaagctgcagacctttgcggggagt
gttacagctcttaaggcagtgcgtctggagtttttcattcctcccggtgggctcgtggtc
gcgctggcttcagaagtgaagctacagaccttcgtggtgagtgttacagctcataaaagc
agtgtggacccaaagccccttgggtggtcgatgggactgggtgccatggagcagggggtg
gcactcgtcggggaggctcgggccgcacaggagcccacggagggtatgggaggctcaggc
atggcggctgcaggtcccgagccctgccccacgggaaggcagctaaggacaggcgaggaa
ttgagcgcagcgccgaaagtcctgtctgagtacattgagagtgctataacaagttaccat
aaactgggaaattataaacaacagaaatttatttctcacagtttgaagtctggaaagtcc
aagattgaggtgctggcagatttgcctactcaacgtgaagatgatgagcctcataacttt
gtgagaatgtataaagaatgcctttcatgttggttggaatctggcatacctaatttaggt
gtctggccaaaaagaatacatactacagcagaaaaatatagagaatatgaagcccgggag
caaacagatcaaactcaagtccaggagttacacagatctcaagatagagattttgaaact
atggctaaattacatattccagtaatggtggatgaagttgttcattgtttgtcaccacaa
aaaggacagatttttctagatatgacatttggttcgggagggcacacaaaagccattctg
cagaaggagtcagatattgttctctatgccttggacagagacccaacagcttatgcatta
gctgaacatctttcagagttgtatcctaaacaaatccgagctatgctgggccagttcagc
caggcagaagccttattaatgaaagctggagtgcagccaggaacttttgatggagttctt
atggatcttgggtgttcctccatgcaacttgatactcctgaaagaggttcttcccttcgg
aaagatggccctttggacataagaatggatgacttactacagcaatctacctatattgcc
accaagactttccaggctcttcgcatatttgtgaacaatgagctcaatgaactctacacg
ggactgaagacagctcagaagtttctgagacttggtggtcgtcttgttgccctctccttc
cattcactagaggatcgcatcgtcaaaagatttttgcttggaataagcatgacagaaaga
tttaacctaagtgttagacaacaagtgatgaaaacatctcaattgggttcagatcatgaa
aacacggaagaagtctctatgagaagagctcctttaatgtgggaactgatacacaagaag
gtatttagtccacaagatcaggatgtacaagataaccccagagggcgctcagccaagctt
agagcagctatcaaattataa

>gi568815595r:156709551_156910732|GENSCAN_predicted_peptide_2|460_aa
MSGKDEQQEQTIAEDLVVTKYKMEGDIANRGDQVTGRKADVIKAAHLCAEAALRLVKPGN
QNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIH
KVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLR
AFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPD
LCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAENVASGETLEENEAGDRWVPSPQ
LAAPASSPSHHTPDSVKRSSSSPPRTASRAGVSLPPPQFPNPLPSNNNQLQLTLEEAAVH
LRIGVELGEDKKRSWQQGRKIILEMSEEVVGGGGGGGSGRGGGGGVVCTCVPNIGQGATL
HEHLLNAIDLLNELIFLFKEKEDNCEGLKEGKVNYQKKAL

>gi568815595r:156709551_156910732|GENSCAN_predicted_CDS_2|1383_bp
atgtcgggcaaggatgagcagcaggagcaaactatcgctgaggacctggtcgtgaccaag
tataagatggagggtgacatcgccaacaggggggaccaagtaacagggaggaaggcagat
gttattaaggcagctcacctttgtgctgaagctgccctacgcctggtcaaacctggaaat
cagaacacacaagtgacacaagcctggaacaaagttgcccactcatttaactgcacgcca
gtagaaggtatgctgtcacaccagttgaagcagcatgtcattgatggagaaaaaaccatt
atccagaatcccacagaccagcagaagaaggaccatgaaaaagctgaatttgacatacat
aaagtgtatgctgtggatgttcttgtcagctcaggagagggcaagcccaaggatgcagga
cagagaaccactatttacaaacaagacccttctaaacagtatggactgaaaatgaaaact
tcacgtgccttcttcagtgaggtggaaacgcgttttgatgccatgccgtttactttaaga
gcatttgaagatgagaagaaggctcagatgggtgtggtggagtgcgccaaacatgaactg
ctgcaaccatttaatgttctctatgagaaggagggtgaatttgttgcccagtttaaattt
acagttctgctcatgcccagtggccccatgcggataaccagtggtcccttcgagcctgac
ctctgcaagtctgagatggaggtccaggatgcagagctaaaggccctcctccagagttct
acaagtcgaaaaacccagaaaaagaaaacaaagaaggcctccaagactgcagagaatgtc
gccagtggggaaacattagaagaaaatgaagctggggacaggtgggtcccatctccccag
cttgctgctcctgcctcatccccttcccaccacaccccggactctgtgaagcgcagttct
tcttctccacctaggaccgccagcagagcaggggtctccctgcccccaccccagttcccc
aacccactcccttccaacaacaaccagctccaactgactctggaagaagcagcagtacac
ttaagaattggagtagagttgggggaagataaaaagagaagttggcagcaggggagaaaa
attatcttagaaatgtctgaagaagtagtaggaggaggaggaggaggaggaagtgggaga
ggaggaggaggaggagtagtgtgcacgtgtgtcccaaatataggccaaggtgccacatta
catgagcatctactaaatgcaattgatcttctaaatgaattgatcttcttgtttaaagaa
aaggaagacaactgtgaaggtttgaaggaaggcaaagtgaactaccagaaaaaggcattg
tga

>gi568815595r:156709551_156910732|GENSCAN_predicted_peptide_3|137_aa
MQSANCTSAYDSGKTYTHRLNMMAERIKKHEANFSGENDGKQSIVCFCLMIFLTGDFDEG
LNSSDAPTGDHLEGADPPPPPSAKRGAAAATRPEPALSCAALRDWLHFSAPTAVVTQTDL
IAGRHDTRFPSPARGVA

>gi568815595r:156709551_156910732|GENSCAN_predicted_CDS_3|414_bp
atgcagtcagcaaactgcacgagtgcctatgactctggtaaaacttatacacatagactt
aatatgatggcagagagaattaagaaacatgaggccaactttagtggggagaatgatggg
aagcaaagtattgtatgcttttgtcttatgattttcttaacaggagactttgatgaagga
ctgaatagttctgacgcccccaccggcgaccacctggaaggggctgatccacccccacct
ccctctgcgaagcgcggagcggctgcggccacccggccagagccagcgctgagctgcgct
gcgctgcgtgactggctgcatttctcagccccgacggctgtggttactcaaactgatctc
atcgcaggtcgtcacgacacgcgcttcccctcgcctgcacgcggcgtggcgtga

>gi568815595r:156709551_156910732|GENSCAN_predicted_peptide_4|280_aa
MAPTAMVQQAASPKLLRDKEPGKLACRQKAYEIALNMMKNTQELQDHFFLKGRTAHMAMI
ITQCFKEIITMPELTAKATGVSRQAINSRSAFKPLRKEPFPWRESPTTSRSGAGEGGSSH
PKTFLKRQALPHRNQPQGQTKLLEWLSNLSLSNPVPPGPAVAGRGGGGGCGVALEEPFSP
LLHCGSPFLGWPRPELAPSACREVWRERGERELGLRAVLAGQLEFRVGVGLAGPALGAAS
RPCQPRAMRGLAPRPVAVEVVLGPPAVPAHWRCTRFLAGP

>gi568815595r:156709551_156910732|GENSCAN_predicted_CDS_4|843_bp
atggcccccacagctatggtacagcaagcagcatcaccaaagctgctgagagataaggaa
cctggaaagctagcatgccggcaaaaggcttatgaaattgcactaaacatgatgaaaaat
acacaagaacttcaagatcactttttcctgaagggaagaactgctcacatggccatgatt
atcacacagtgttttaaggagataatcacaatgcctgagctcactgcaaaagcaacagga
gtgtcacgtcaggccattaactcacgttcagctttcaagcccttacgtaaagaaccattc
ccatggcgtgaatcacccacaacgagcaggtcaggggcaggtgaaggcgggagttcacat
cctaagactttcctgaagcggcaggctcttccacacagaaaccaaccgcaaggccagaca
aaactgctggaatggctttcaaatctgtccctttctaaccccgttccccctggacctgca
gtggccggaagaggaggaggaggagggtgcggggtggcacttgaggaacccttcagccca
ctgctgcactgtgggagcccctttctgggctggccaaggccagagctggctccctcagct
tgcagggaggtgtggagggagaggggcgagcgggaactggggctgcgcgccgtgcttgcg
ggccagctggagttccgggtgggcgtgggcttggcaggccccgcactcggagcagccagc
cggccctgccagccacgggcaatgaggggcttagcacccaggccagtggctgtggaggtt
gtactgggtccccccgcagtgccagcccactggcgctgcactcgatttctcgctgggcct
tag

>gi568815595r:156709551_156910732|GENSCAN_predicted_peptide_5|246_aa
MCIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLNLISNFSKVSGYKINVQKSQAFLYTN
NRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKSLLNEIKEDRNKWKNISCS
WVGRINIMKMAILPKMLPEEKVCKYCGVSYLILHEFKAMEEKVKAMEKEMKFYQGSVDRE
KRLQEKLHSLSQELEQYKIDNKSKTERLTLFGVYGSSVKGIYAKNDWDNLILNNQDLIEQ
RTDAEL

>gi568815595r:156709551_156910732|GENSCAN_predicted_CDS_5|741_bp
atgtgcattcagttaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgatt
gtatatctagaaaaccccattgtctcagcccaaaatctccttaacctgataagcaacttc
agcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaat
aacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagaga
ataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactac
aaatcacttctcaatgaaataaaagaggatagaaacaaatggaagaacatttcatgctca
tgggtaggaagaatcaatatcatgaaaatggccatattgcccaagatgttgcctgaagaa
aaagtttgtaagtactgtggagtcagctatctaattcttcatgaatttaaggctatggaa
gaaaaagtgaaagcaatggaaaaagagatgaaattttatcaaggaagtgtagatcgtgaa
aagagacttcaagaaaagctgcattctcttagccaagaacttgaacagtacaaaattgac
aacaaatccaaaacagaaaggttgacactttttggtgtttatggaagtagtgtaaagggc
atttatgctaaaaatgattgggacaacttaattttgaataatcaagatttgatagaacaa
agaactgatgcagaactgtag

>gi568815595r:156709551_156910732|GENSCAN_predicted_peptide_6|132_aa
MTILPKAIHRFKAISIKVPSSSFTELEKTILKFLWNQKKTCTAKASLGKKKKCEDITLPN
FKLYYKAMVTKTAWYWYKNRHVDQWNRRENPEIKPNTYSHLIFNNKKQNQSRERTPYSTN
GATIIGKPHVEE

>gi568815595r:156709551_156910732|GENSCAN_predicted_CDS_6|399_bp
atgaccatactgccaaaagcaatccatagattcaaagcaatttctatcaaagtaccatca
tcatccttcacagaactagaaaaaacaatcttaaaattcttatggaaccaaaaaaagacc
tgcacagctaaagccagtctaggcaaaaagaaaaaatgtgaagacatcacattacccaac
ttcaaactatactacaaggctatggttaccaaaacagcatggtactggtataaaaacagg
catgtagaccaatggaacagaagagagaacccagaaataaagccaaatacttacagccac
ctgattttcaacaataaaaaacaaaaccaaagtagggaaaggacaccctattccacaaat
ggtgccacgataattggcaagccacatgtagaagaataa