GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:36:16

Sequence gi568815595r:156613887_156814928 : 201042 bp : 39.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3373   3518  146  0  2   81   56   131 0.653   8.84
 1.02 Intr +   4772   4860   89  2  2  107   68    73 0.900   5.90
 1.03 Intr +   8262   9161  900  1  0   74  -32   579 0.514  34.83
 1.04 Intr +   9357   9603  247  1  1   19   52   270 0.924  12.10
 1.05 Intr +  11178  11450  273  0  0   74   31   205 0.387   9.13
 1.06 Term +  18931  19033  103  1  1   80   52    94 0.267   1.77
 1.07 PlyA +  19038  19043    6                               1.05

 2.00 Prom +  21745  21784   40                              -1.55
 2.01 Init +  47464  47569  106  0  1   62   57    96 0.181   4.33
 2.02 Intr +  54945  55009   65  1  2  101   87    50 0.234   3.72
 2.03 Intr +  55311  55362   52  2  1   81  106     0 0.173  -1.34
 2.04 Intr +  58249  58438  190  2  1   68   65    73 0.164   0.72
 2.05 Intr +  60650  60910  261  2  0   73  103   261 0.998  21.78
 2.06 Intr +  61288  61505  218  1  2   -3   83   181 0.642   5.72
 2.07 Intr +  63771  64728  958  1  1  134   71   433 0.815  35.40
 2.08 Intr +  80134  80302  169  1  1   86   53    90 0.649   4.33
 2.09 Intr +  81979  82139  161  0  2   97   98    83 0.972   8.06
 2.10 Intr +  88113  88232  120  0  0    7   19   167 0.544   0.39
 2.11 Intr +  89538  89816  279  0  0  116  113   141 0.999  15.07
 2.12 Term +  90798  91245  448  0  1   77   48   283 0.993  16.90
 2.13 PlyA +  92842  92847    6                               1.05

 3.10 PlyA -  93098  93093    6                               1.05
 3.09 Term - 100407  99998  410  1  2    9   38   330 0.711  14.49
 3.08 Intr - 101016 100451  566  2  2   50   -7   304 0.438   8.61
 3.07 Intr - 104286 104246   41  0  2  106   92    59 0.628   4.20
 3.06 Intr - 105705 105577  129  0  0   59   73    86 0.755   4.17
 3.05 Intr - 127063 126885  179  2  2   47   68   126 0.135   5.22
 3.04 Intr - 127714 127550  165  2  0   43   49   173 0.548   7.91
 3.03 Intr - 128068 127741  328  1  1  101   68   148 0.611   8.45
 3.02 Intr - 137297 137209   89  0  2   63  101    56 0.013   3.17
 3.01 Init - 157614 157521   94  0  1   55   62    82 0.039   2.89
 3.00 Prom - 183857 183818   40                              -4.15

 4.06 PlyA - 184942 184937    6                               1.05
 4.05 Term - 185151 184999  153  0  0   59   42   130 0.353   2.44
 4.04 Intr - 192844 192746   99  1  0  101    3   143 0.525   6.49
 4.03 Intr - 193309 193241   69  1  0   58  103    39 0.628   0.86
 4.02 Intr - 196452 195482  971  1  2   -5  -18   931 0.319  62.98
 4.01 Init - 196846 196756   91  1  1   67   32   146 0.582   7.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:156613887_156814928|GENSCAN_predicted_peptide_1|585_aa
MGGKERKGMKEQVAELYREVIADLTDKETLEQSFEGGNESAKQTFERRKIPPTIYSEAPE
VQCNKKCFIGVAKWEPPAGGHTEITETIKNLEEVQIVCGTHSPYNSPVWPVRKPNGTCWM
MVDYWELNKVTPPLHAAVLSIMDLMDCLMTELGQYHYEVDLANAFFSIDIAPETQEQFAF
MWDRQQWTFTVLLQGYVHSPTICPGLVATDLAAWQCPEGVHLFHYIDDIMLTSDSLADLE
VVAPLLQQHVAAYGWAINESKVQGPGLAAKFLGVIWSGKTKAIPEAMIDKIQAYPWPTTV
KKLQIFVGLLGYQRAFVSFLAQMIKLLHWLTKKGAPWDWDDAAETAFLAAKLAIQQAQAL
WVVDLGHPFELDVHVTTDVRWVHSWVTTPQTGTVQTSTLAKWGAYVEQQGTLSTNPLAAE
LQEVLGPVVLMQDKAMGPEAALDPEPSPFKEGHPSIPDGAWLTCSNCIVDWAHTYAEVTN
VSNSLICTTLPAAAADCLPWHIHPVSSVNWTWLETWGPMADASNAMQQALDKGCHKAHGA
PTPWLAHSVYNGSSSPSTKSLSHGELKPSPEADAGTMLLVQPAEP

>gi568815595r:156613887_156814928|GENSCAN_predicted_CDS_1|1758_bp
atggggggaaaagaaagaaaaggcatgaaggaacaagttgcagaattatacagagaggtc
atagcagacctcactgacaaggaaacattagaacaaagctttgaaggagggaatgagtca
gccaagcagacatttgaaagaagaaagattcctccgacaatatacagtgaagctcctgaa
gttcaatgcaataagaagtgcttcattggcgtggcaaagtgggaacctcctgcaggtggg
catacagagataactgagacaattaaaaacctggaggaggtgcagatagtgtgtggcacc
cacagcccctacaattctccagtgtggccagttagaaagcctaatggaacttgttggatg
atggtggactattgggaactgaataaagtaacaccccctttgcatgcagctgtactgtca
atcatggatttgatggactgtttgatgacagaactgggacagtatcactatgaagtggac
ttggccaatgcatttttctccattgacattgctccagagacccaggaacagtttgccttc
atgtgggataggcaacaatggactttcacagtgttgctgcagggctatgtgcatagcccc
accatatgtcctggtctagttgcaacagatttagctgcctggcaatgtccagaaggggtc
cacctattccattatattgatgatatcatgttaacctctgattctcttgcagatttagaa
gtggtggcacccctcttgcagcaacatgtagcagcatacggttgggccatcaatgaatcc
aaggtccaagggcctggattagctgccaaattcttgggagttatctggtcaggtaagaca
aaggccatcccagaggctatgattgataagattcaggcatatccctggcccaccacagtg
aagaagctgcagatttttgtggggctcctgggatatcagcgggcatttgtgtccttttta
gctcaaatgataaaattgttgcattggttaacaaagaagggagctccctgggattgggat
gatgcggctgagaccgccttcctggcagccaagctggctattcagcaggcacaagcccta
tgggtagttgacttggggcacccatttgagctggatgtgcatgtgaccacagatgtgaga
tgggtgcattcatgggtaacgaccccccagactgggacggtgcagacatccactttggca
aagtggggtgcctacgtggagcagcagggtacactgagtacaaaccccttagcagcagag
ttgcaagaggtcttgggacctgtagtcctaatgcaagataaggccatggggcctgaggca
gccctagaccctgagccttcaccatttaaggaagggcatccctcaattcctgatggggca
tggttaacatgctccaactgcattgtggactgggcccacacctacgctgaagtgaccaat
gtttccaactctttgatctgtaccacccttccagcagcagctgcggactgcttgccttgg
cacatacaccccgtgtcttcagtgaactggacatggttggagacttggggccccatggct
gatgcctcgaatgcaatgcagcaagctttggacaaaggctgccacaaggcccatggtgca
cccaccccctggctggcccatagtgtttataatgggtcctcttccccttctaccaagagc
ttgtcccatggtgagctgaagccctcaccagaagcagatgctggtaccatgcttcttgta
cagcctgcagaaccgtga

>gi568815595r:156613887_156814928|GENSCAN_predicted_peptide_2|1008_aa
MKSSNTGCEIQIKHRVTETIVGYGNIDTVIIRKTLGLLTLTFPKQKHSGALSEAEKKNPT
SAELLLREIGNLPLEERKKGRNSRGDSIRKGNAFPEISSMCLEVYPMAIHNPMGSREMNF
SARHTVIPPSKKDGPRPRLRLRDGPSGGGDRKPLKAEIEVTGELAGLGARSRLSAFAAAE
WPVRGSPRRGSVVPRRRLPPSALISGAGTAFHSAPVVRSLRLPFRPRGGGHGSYGSLPAT
PRFGLQPRSLEDVFTLTLRAHKSSSSSPPPREALAAFPPRFAAQFCEPPRPVGRSSGGFL
DSEEQLELIHIMEMETTEPEPDCVVQPPSPPDDFSCQMRLSEKITPLKTCFKKKDQKRLG
TGTLRSLRPILNTLLESGSLDGVFRSRNQSTDENSLHEPMMKKAMEINSSCPPAENNMSV
LIPDRTNVGDQIPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQTDLLHPVSS
DVPTSPDCLDKVIDYVPGIFQENSFTIQYILDTSDKLSTELFQDKSEEASLDLVFELVNQ
LQYHTHQENGIEICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHL
ERFYCNPENDRMRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPSSNVNSIYHTVWKF
FCRDHFGWREYPESVIRLIEEANSRGLKEVRFMMWNNHYILHNSFFRREIKRRPLFRSCF
ILLPYLQLCVDDNAVVVVVVVVVVVVVVVVVVVVVVVVVMVVSGKTRTLGGVPTQAPPPL
EATSSSQIICPDGVTSANFYPETWVYMHPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFK
YRILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDP
RVCGKHATMFGQGSYFAKKASYSHNFSKKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPV
NPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYEEVSNTVSI

>gi568815595r:156613887_156814928|GENSCAN_predicted_CDS_2|3027_bp
atgaaaagtagtaacactggatgtgaaattcagatcaaacatagagttacagaaacgata
gttggctatggcaatattgacactgtgatcattagaaagactctaggccttttaaccctc
acctttcctaaacagaagcactctggtgccttgtcagaggcagagaaaaaaaatcccacg
agtgcagaactccttctcagggaaataggaaatcttcctttggaagaaagaaaaaaagga
agaaattcaaggggtgactctattaggaaaggaaacgcttttccagaaatctcaagcatg
tgtctagaagtgtatcccatggccatccataaccccatgggctctagggaaatgaatttt
tcagctaggcacactgtcatccctccttcaaaaaaagatgggccacgtccgaggctccgc
ctccgcgacgggccgtcgggaggaggcgaccggaagccacttaaagcagagatcgaggtg
acaggcgagctggctggactcggagcgcggtcgaggctttctgcgttcgcggcggcggaa
tggcccgtgcgcggctcgccgcgtcgcggctctgtggtccctagacgtcggctcccgccc
tcggcgctgatctccggcgcgggcactgctttccactcggctcctgtcgtccgttctctc
aggctcccgttcagaccccgggggggagggcacggcagctacgggagccttccggctacc
ccgcgtttcgggctgcagcccagaagtttggaagatgttttcacattaactttgagagcg
cacaagtcttcgtcttcctccccgccgccgcgggaagcgctcgccgcctttcccccgcgc
ttcgcggctcagttctgcgagcccccaagacccgttggacgctcctcgggaggattttta
gactctgaggagcagttggagctaatccacattatggaaatggaaaccaccgaacctgag
ccagactgtgtagtgcagcctccctctcctcctgatgacttttcatgccaaatgagactc
tctgagaagatcactccattgaagacttgttttaagaaaaaggatcagaaaagattggga
actggaaccctgaggtctttgaggccaatattaaacactcttctagaatctggctcactt
gatggggtttttagatctaggaaccagagtacagatgagaacagcttacatgaacctatg
atgaagaaagccatggaaatcaattcatcatgcccaccagcagaaaataatatgtctgtt
ctgattcctgataggacaaatgttggggaccagataccggaagcccatccttccactgaa
gctccagaacgagtggttccaatccaagatcacagctttccatcagaaaccctcagtggg
acggtggcagattccacaccagctcacttccagactgatcttttgcacccagtttcaagt
gatgttcctactagtcctgactgcttagacaaagtcatagattatgttccaggcattttc
caagaaaacagttttacaatccaatacattctggacaccagtgataagctgagtactgag
ctctttcaggacaaaagtgaagaggcttcccttgacctcgtgtttgagctggtgaaccag
ttgcagtaccacactcaccaagagaacggaattgaaatttgcatggactttctgcaaggc
acttgtatttatggcagggattgtttgaagcaccacactgtcttgccatatcattggcag
atcaaaaggacaactactcaaaagtggcagagtgtattcaatgattctcaggagcacttg
gaaagattttactgtaacccagaaaatgatagaatgagaatgaagtatggaggacaagaa
ttttgggcagatttgaatgccatgaacgtgtatgaaacaactgaatttgaccaactacga
aggctgtccacaccaccctctagcaatgtcaactctatttaccacacagtctggaaattc
ttctgtagggaccactttggatggagagagtatcccgagtctgtcattcgattgattgaa
gaagccaactctcggggtctgaaagaggttcgatttatgatgtggaataaccactacatc
ctccacaattcattcttcaggagagagataaaaaggagacccctcttccgctcctgtttt
atactgcttccatatttacaactgtgtgttgatgataatgcggtggtggtggtggtggtg
gtggtggtggtggtggtggtggtggtggtggtggttgtggtggtggtggtggtggtgatg
gtggtgtcaggcaaaactaggacacttggtggggttcccacacaagctcctccacctctt
gaagcaacttcatcatcacaaattatctgcccagatggggtcacttcagcaaacttttac
cctgaaacttgggtttatatgcatccatctcaggacttcatccaagtccctgtttctgca
gaggataaaagttatcggatcatttacaatctttttcataagactgtgcctgagtttaaa
tacagaattttgcagatattgagagtccaaaaccagtttctttgggagaaatataaaagg
aaaaaggaatatatgaacaggaaaatgtttggccgtgacaggataataaatgagagacat
ttatttcatggaacatcccaggatgtggtagatggaatctgcaaacacaactttgaccct
cgagtctgtggaaagcatgctacaatgtttggacaaggcagttattttgcaaagaaggca
agctactctcataacttttctaagaagtcctccaaaggagtccacttcatgtttctggcc
aaagtgctgacgggcagatacacaatgggcagtcatggcatgagaaggcccccgccagtc
aatcctggcagtgtcaccagtgacctttatgactcttgtgtggataatttctttgagcct
cagatttttgtcatttttaatgatgaccagagttacccttattttgttatccaatatgaa
gaagtcagtaacactgtttccatttga

>gi568815595r:156613887_156814928|GENSCAN_predicted_peptide_3|666_aa
MSVGYLTGDIKMSVGHLTGGMKTGEIRVDVIDSFGSSAFLSEGLKSLSRISQEKGMRMRV
MTPPSRFASPGKLNCPWSVIPRGQATLGWNFLHCPPVSQQKKPRALPSDVGQHAESPSSC
PSVSGIGGFLVSLTLTMKPRTLAVSVTALKVVRLELVPSDVQMCSEFLPSGVKLQTFAGS
VTALKAVRLEFFIPPGGLVVALASEVKLQTFVVSVTAHKSSVDPKPLGWSMGLGAMEQGV
ALVGEARAAQEPTEGMGGSGMAAAGPEPCPTGRQLRTGEELSAAPKVLSEYIESAITSYH
KLGNYKQQKFISHSLKSGKSKIEVLADLPTQREDDEPHNFVRMYKECLSCWLESGIPNLG
VWPKRIHTTAEKYREYEAREQTDQTQVQELHRSQDRDFETMAKLHIPVMVDEVVHCLSPQ
KGQIFLDMTFGSGGHTKAILQKESDIVLYALDRDPTAYALAEHLSELYPKQIRAMLGQFS
QAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGSSLRKDGPLDIRMDDLLQQSTYIA
TKTFQALRIFVNNELNELYTGLKTAQKFLRLGGRLVALSFHSLEDRIVKRFLLGISMTER
FNLSVRQQVMKTSQLGSDHENTEEVSMRRAPLMWELIHKKVFSPQDQDVQDNPRGRSAKL
RAAIKL

>gi568815595r:156613887_156814928|GENSCAN_predicted_CDS_3|2001_bp
atgtctgttggatatctgactggagatataaagatgtctgttggacatctgactggaggt
atgaagactggagaaataagagtggatgtgattgactcatttggaagcagtgcattttta
tcagagggactgaaaagcctttcgagaatcagtcaagaaaaaggaatgcgcatgagagtc
atgaccccaccttcaaggtttgcttcaccagggaaactcaactgcccctggtctgtgatc
ccaaggggtcaggccactttaggctggaacttcctccactgcccacctgtgagtcaacaa
aagaagccaagagctttaccctcagacgtaggccagcatgctgaaagcccgtcttcctgc
cctagtgtgtctggaattggtgggttcttggtctcactgactttaacaatgaagccgcgg
accctcgcggtgagtgttacagctcttaaggtggtgcgtctggagcttgttccttctgat
gttcagatgtgttcggagtttcttccttctggagtgaagctgcagacctttgcggggagt
gttacagctcttaaggcagtgcgtctggagtttttcattcctcccggtgggctcgtggtc
gcgctggcttcagaagtgaagctacagaccttcgtggtgagtgttacagctcataaaagc
agtgtggacccaaagccccttgggtggtcgatgggactgggtgccatggagcagggggtg
gcactcgtcggggaggctcgggccgcacaggagcccacggagggtatgggaggctcaggc
atggcggctgcaggtcccgagccctgccccacgggaaggcagctaaggacaggcgaggaa
ttgagcgcagcgccgaaagtcctgtctgagtacattgagagtgctataacaagttaccat
aaactgggaaattataaacaacagaaatttatttctcacagtttgaagtctggaaagtcc
aagattgaggtgctggcagatttgcctactcaacgtgaagatgatgagcctcataacttt
gtgagaatgtataaagaatgcctttcatgttggttggaatctggcatacctaatttaggt
gtctggccaaaaagaatacatactacagcagaaaaatatagagaatatgaagcccgggag
caaacagatcaaactcaagtccaggagttacacagatctcaagatagagattttgaaact
atggctaaattacatattccagtaatggtggatgaagttgttcattgtttgtcaccacaa
aaaggacagatttttctagatatgacatttggttcgggagggcacacaaaagccattctg
cagaaggagtcagatattgttctctatgccttggacagagacccaacagcttatgcatta
gctgaacatctttcagagttgtatcctaaacaaatccgagctatgctgggccagttcagc
caggcagaagccttattaatgaaagctggagtgcagccaggaacttttgatggagttctt
atggatcttgggtgttcctccatgcaacttgatactcctgaaagaggttcttcccttcgg
aaagatggccctttggacataagaatggatgacttactacagcaatctacctatattgcc
accaagactttccaggctcttcgcatatttgtgaacaatgagctcaatgaactctacacg
ggactgaagacagctcagaagtttctgagacttggtggtcgtcttgttgccctctccttc
cattcactagaggatcgcatcgtcaaaagatttttgcttggaataagcatgacagaaaga
tttaacctaagtgttagacaacaagtgatgaaaacatctcaattgggttcagatcatgaa
aacacggaagaagtctctatgagaagagctcctttaatgtgggaactgatacacaagaag
gtatttagtccacaagatcaggatgtacaagataaccccagagggcgctcagccaagctt
agagcagctatcaaattataa

>gi568815595r:156613887_156814928|GENSCAN_predicted_peptide_4|460_aa
MSGKDEQQEQTIAEDLVVTKYKMEGDIANRGDQVTGRKADVIKAAHLCAEAALRLVKPGN
QNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIH
KVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLR
AFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPD
LCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAENVASGETLEENEAGDRWVPSPQ
LAAPASSPSHHTPDSVKRSSSSPPRTASRAGVSLPPPQFPNPLPSNNNQLQLTLEEAAVH
LRIGVELGEDKKRSWQQGRKIILEMSEEVVGGGGGGGSGRGGGGGVVCTCVPNIGQGATL
HEHLLNAIDLLNELIFLFKEKEDNCEGLKEGKVNYQKKAL

>gi568815595r:156613887_156814928|GENSCAN_predicted_CDS_4|1383_bp
atgtcgggcaaggatgagcagcaggagcaaactatcgctgaggacctggtcgtgaccaag
tataagatggagggtgacatcgccaacaggggggaccaagtaacagggaggaaggcagat
gttattaaggcagctcacctttgtgctgaagctgccctacgcctggtcaaacctggaaat
cagaacacacaagtgacacaagcctggaacaaagttgcccactcatttaactgcacgcca
gtagaaggtatgctgtcacaccagttgaagcagcatgtcattgatggagaaaaaaccatt
atccagaatcccacagaccagcagaagaaggaccatgaaaaagctgaatttgacatacat
aaagtgtatgctgtggatgttcttgtcagctcaggagagggcaagcccaaggatgcagga
cagagaaccactatttacaaacaagacccttctaaacagtatggactgaaaatgaaaact
tcacgtgccttcttcagtgaggtggaaacgcgttttgatgccatgccgtttactttaaga
gcatttgaagatgagaagaaggctcagatgggtgtggtggagtgcgccaaacatgaactg
ctgcaaccatttaatgttctctatgagaaggagggtgaatttgttgcccagtttaaattt
acagttctgctcatgcccagtggccccatgcggataaccagtggtcccttcgagcctgac
ctctgcaagtctgagatggaggtccaggatgcagagctaaaggccctcctccagagttct
acaagtcgaaaaacccagaaaaagaaaacaaagaaggcctccaagactgcagagaatgtc
gccagtggggaaacattagaagaaaatgaagctggggacaggtgggtcccatctccccag
cttgctgctcctgcctcatccccttcccaccacaccccggactctgtgaagcgcagttct
tcttctccacctaggaccgccagcagagcaggggtctccctgcccccaccccagttcccc
aacccactcccttccaacaacaaccagctccaactgactctggaagaagcagcagtacac
ttaagaattggagtagagttgggggaagataaaaagagaagttggcagcaggggagaaaa
attatcttagaaatgtctgaagaagtagtaggaggaggaggaggaggaggaagtgggaga
ggaggaggaggaggagtagtgtgcacgtgtgtcccaaatataggccaaggtgccacatta
catgagcatctactaaatgcaattgatcttctaaatgaattgatcttcttgtttaaagaa
aaggaagacaactgtgaaggtttgaaggaaggcaaagtgaactaccagaaaaaggcattg
tga