GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:16:47

Sequence gi568815595r:15275376_15475645 : 200270 bp : 45.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   1450   1445    6                               1.05
 1.07 Term -  16528  16458   71  2  2   99   36    81 0.623   2.10
 1.06 Intr -  17997  17848  150  1  0   99   78    33 0.428   3.53
 1.05 Intr -  25421  25394   28  2  1  126   72   -15 0.318  -1.61
 1.04 Intr -  28856  28728  129  2  0   94  110   157 0.971  19.39
 1.03 Intr -  30648  30615   34  2  1  134   65     4 0.965   0.93
 1.02 Intr -  31902  31752  151  1  1   62   88    71 0.092   3.72
 1.01 Init -  36018  35970   49  0  1   86   64    35 0.062   0.01
 1.00 Prom -  37260  37221   40                              -4.96

 2.00 Prom +  37908  37947   40                              -4.06
 2.01 Init +  44087  44161   75  1  0   91   80    -2 0.363   0.39
 2.02 Intr +  49042  49119   78  0  0   73   77    86 0.217   5.75
 2.03 Term +  54316  54360   45  0  0  115   54    21 0.093  -1.39
 2.04 PlyA +  54640  54645    6                               1.05

 3.03 PlyA -  54991  54986    6                               1.05
 3.02 Term -  55191  55093   99  0  0  111   41   121 0.576   7.83
 3.01 Init -  57033  56896  138  0  0   70   91   286 0.269  25.24
 3.00 Prom -  66044  66005   40                              -4.26

 4.00 Prom +  72760  72799   40                              -3.36
 4.01 Init +  76609  76656   48  0  0   77   78    57 0.504   4.72
 4.02 Term +  97351  97491  141  0  0   66   44   152 0.826   6.53
 4.03 PlyA +  97508  97513    6                              -0.45

 5.03 PlyA -  98727  98722    6                               1.05
 5.02 Term - 100309  99998  312  1  0   42   45   409 0.310  27.00
 5.01 Init - 111624 111622    3  0  0  108   81     0 0.405   1.30
 5.00 Prom - 116608 116569   40                              -2.46

 6.02 PlyA - 117369 117364    6                               1.05
 6.01 Sngl - 121235 120846  390  2  0   88   54   284 0.951  21.22
 6.00 Prom - 131050 131011   40                              -4.96

 7.05 PlyA - 131648 131643    6                               1.05
 7.04 Term - 136062 135881  182  1  2   71   43   107 0.804   2.27
 7.03 Intr - 138787 138646  142  1  1   79   95    22 0.889   1.93
 7.02 Intr - 140567 140397  171  2  0   95   96   101 0.982  11.74
 7.01 Init - 148637 148572   66  2  0   79   80    25 0.239  -0.13
 7.00 Prom - 150187 150148   40                              -5.56

 8.00 Prom + 151033 151072   40                              -4.36
 8.01 Init + 152138 152267  130  1  1   64   63    48 0.453  -0.40
 8.02 Intr + 152301 152507  207  1  0   91   81   154 0.527  14.05
 8.03 Intr + 154538 154632   95  0  2  114   76    53 0.997   6.38
 8.04 Intr + 156712 156848  137  0  2   39   95   120 0.966   7.17
 8.05 Intr + 158973 159163  191  0  2  121   65   172 0.999  17.43
 8.06 Intr + 160967 161200  234  0  0   80   89   209 0.993  17.86
 8.07 Term + 165188 165216   29  0  2  115   43    -7 0.240  -4.26
 8.08 PlyA + 167214 167219    6                               1.05

 9.12 PlyA - 168019 168014    6                               1.05
 9.11 Term - 176338 176269   70  0  1   81   55   170 0.888  10.41
 9.10 Intr - 178556 178454  103  0  1  106   45   143 0.998  11.03
 9.09 Intr - 180644 180524  121  2  1   67   75    96 0.954   6.27
 9.08 Intr - 181204 181085  120  1  0   49   80   152 0.878  11.19
 9.07 Intr - 182950 182811  140  2  2   74   79    50 0.648   2.88
 9.06 Intr - 191062 190966   97  1  1   91  110    34 0.852   5.48
 9.05 Intr - 195241 195161   81  1  0  133  110    63 0.993  12.83
 9.04 Intr - 198660 198625   36  0  0   91  106     6 0.656   1.16
 9.03 Intr - 198897 198853   45  0  0  106   90    37 0.926   4.31
 9.02 Intr - 199576 199550   27  1  0  109   96    -1 0.665   1.11
 9.01 Intr - 200112 200050   63  0  0   83   86    48 0.707   3.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_1|203_aa
MGFCHVGQAGLELLTSEAAADDPKPGLIREKAEEIRMMMMAQNQGKGGKACVGHGIQARE
LRCSHGRCGFVRQMPEGEDARQKFRSVLVEATVKLDELVKKIGKAVEDSKPYWEARRVAR
QVGRKKQGRKEPLACLGAVLATGLWVRRSGSVTFFPVALVTFPLGGHRPVPGNCVIPAAQ
TLPVVTSMKIYPEESDEIIHAEK

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_1|612_bp
atggggttttgccatgttggccaggctggtctcgaactcctgacctcagaagctgcagcg
gatgaccctaagcctggtctgataagggagaaggcagaggaaatcaggatgatgatgatg
gcacagaaccaggggaaagggggcaaagcctgtgttggacatgggatccaggctcgggag
ctgaggtgctcccatgggaggtgtggctttgtcaggcagatgcctgagggagaggatgct
cgtcagaagttccgctctgttctggttgaagcaacggtgaaactggatgaactggtgaag
aaaattggcaaagctgtggaagactccaagccctactgggaggcacggagggtggcgagg
caggtgggcaggaagaagcagggtagaaaagagccacttgcctgcctgggggcagttctt
gccacgggactttgggtgaggaggtctggctcagtgacgttcttccctgtggccctggtc
acattccccctgggtggccacaggccagttcctgggaactgcgtcattcctgctgcccaa
acccttccagttgtgacttctatgaaaatctaccctgaagaatctgatgaaattattcat
gctgagaagtaa

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_2|65_aa
MRVAVFKYGLQFFGTAPGSRRIRMQCPTQDLLQEGLQANVYFNQISPVYKKKQTLPTAPC
IGKLR

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_2|198_bp
atgagggttgcagttttcaaatatggcctacaattctttggcactgccccaggatcaaga
agaattagaatgcagtgccccacacaggatttgctgcaggaaggcctccaggccaatgtt
tacttcaaccagatctcacctgtgtacaagaagaaacagactttgccaacagctccctgc
attgggaaactgcgctga

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_3|78_aa
MDAALKRSRSEEPAEILPPARDEEEEEEEGMEQGLEEEEEVDPRIQGELEKLNQSTDDIN
RRETELEVQRAEFLFLVK

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_3|237_bp
atggacgcggcactgaagcggagccgctcggaggagccagccgaaatcctgccgcctgcc
cgggacgaggaggaggaggaggaagaggggatggagcaggggctggaggaggaagaagag
gtggatccccggatccagggagaactggagaagttaaatcagtccacggatgatatcaac
agacgggagactgaacttgaggtacagagagctgagttcctgttcttggtgaagtga

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_4|62_aa
MVDALAACTLYLEKPQAAKSPPVHAIETATRAIGALTYPEPPLLPSPQYPTIARPTIAYY
TY

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_4|189_bp
atggtggatgcactggcagcttgcaccctgtacctggaaaagccacaggcagccaagagc
ccacctgttcatgctattgaaacagccaccagagccattggggcccttacttacccagag
ccacccctgctgccctcgccccagtaccctaccattgcaaggcccacaattgcctactat
acctactga

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_5|104_aa
MHLRPAAVAIAAATMPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKASA
KKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQSQKAEGAGDAK

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_5|315_bp
atgcacctacgtcccgccgccgtcgccatcgccgcggccaccatgcccaagagaaaggct
gaaggagatgctaaaggagataaagccaaggtgaaggacgaaccgcagagaagatccgct
aggttgtctgctaaacctgctcctccaaagccagagcccaagcctaaaaaggcctctgca
aagaagggagagaaggtacccaaagggaaaaagggaaaggctgatgctggcaaggagggg
aataaccctgcagaaaatggagatgccaaaacagaccagtcacagaaagctgaaggtgct
ggagatgccaagtga

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_6|129_aa
MGKKQSRKTENSKNQSASPPPKERSSSPAMEQSWTENDFDELREEGFRQSNYSELKEEVR
THGKEVKNLEKRLDEWLTRITSVEKPLNDLMELKTMAQELRDKCTSLSSRFNQLEERVSV
MEDQMNEMK

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_6|390_bp
atggggaaaaaacagagcagaaaaactgaaaattctaaaaatcagagcgcctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggacggagaatgactttgat
gagttgagagaagaaggcttcagacaatcaaactactctgagctaaaggaggaagttcga
acccatggcaaagaagttaaaaaccttgaaaaaagattagacgaatggctaactagaata
accagcgtagagaagcccttaaatgacctgatggagctgaaaaccatggcacaagaacta
cgtgacaaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtg
atggaagatcaaatgaatgaaatgaaatga

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_7|186_aa
MVSNSWAQVINLPQPPKMLGLQQNPLYDTERCKVFQCDLTKDDLLDHVPPESVDVVMLIF
VLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDYGLYDHAMLRFKASSKLGENFYVRQDGTR
SYFFTDDFLAQLFMDTGYEEVVNEYVFRETVNKKEGLCVPRVFLQSKFLKPPKNPSPVVL
GLDPKS

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_7|561_bp
atggtctcaaactcctgggctcaggtgatcaacctgcctcagcctcccaaaatgctggga
ttacagcaaaatcctttatatgatacagaaagatgcaaggtattccagtgtgatctgact
aaagatgatcttctggatcatgtaccgccagagtctgtggatgttgttatgttgatattt
gtgctgtcagctgttcatcctgataagatgcaccttgtcttacaaaacatttacaaggta
ttaaaaccaggcaaaagtgtcttgtttcgtgactacggactgtatgatcatgccatgctt
aggtttaaagccagcagcaaacttggagaaaacttttatgttagacaagatgggaccaga
tcatatttttttactgatgacttcctggctcagctctttatggacacaggttatgaagaa
gtggtaaacgagtatgtgtttcgagagacggtgaataaaaaagaaggcctgtgtgtgcca
agagttttccttcagagcaaatttctaaagcctcctaagaacccatctcctgtggtcctg
ggcctggatcctaagtcctga

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_8|340_aa
MAPPPPLPLGTRKFLPDAGSPTALPPQIPLSPPRRGENLLLDPERWPGSTVLPDASARSS
DRGCTGRAPIWVRGRCGAMNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASI
DTSCEGELQVGKGDEVTITLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEYVLEKL
SSSIQVKKTRAEGSSKIQARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKD
NPSPEPQLDDIKRELRAEVDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDNGPASPP
QPSHQQPYNSRPAVANGTSRPQGSNQLMNTLTSGGEAVWT

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_8|1023_bp
atggcaccgcccccgccacttccgctaggaacccggaagttcctacccgacgccggaagt
cccacggccttgcctcctcagattcctctctcacccccacgcagaggagagaacttgctt
ctggacccggagcggtggcccggaagcacagtcctcccagacgccagcgccagaagctcg
gatcgcggctgcaccgggagagcgccgatctgggtgcgaggcaggtgcggggccatgaat
gggaccgcaaacccgctgctggaccgcgaggaacattgcctgaggctcggggagagcttc
gagaagcggccgcgggcctccttccacactattcgttatgattttaaaccagcatctata
gacacttcctgtgaaggagagcttcaagttggcaaaggagatgaagtcacaattacactg
ccacatatccctggatccacaccacccatgactgtgttcaaggggaacaaacggccttac
cagaaagactgtgtgcttattattaatcatgacactggtgaatatgtgctggaaaaactc
agtagcagcattcaggtgaagaaaacaagagctgagggcagcagtaaaatccaggcccga
atggaacagcagcccactcgtcctccacagacgtcacagccaccaccacctccaccacct
atgccattcagagctccaacgaagcctccagttggacccaaaacttctcccttgaaagat
aacccctcacctgaacctcagttggatgacatcaaaagagagctgagggctgaagttgac
attattgaacaaatgagcagcagcagtgggagcagctcttcagactctgagagctcttcg
ggaagtgatgacgatagctccagcagtggaggcgaggacaatggcccagcctctcctccg
cagccttcacaccagcagccctacaacagtaggcctgccgttgccaatggaaccagccgg
ccacaaggaagcaaccagctcatgaacaccctcactagtggaggggaagcagtctggact
tag

>gi568815595r:15275376_15475645|GENSCAN_predicted_peptide_9|300_aa
GEKGDLGMMGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEM
GPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLI
MGPKGERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQN
AIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGD
DCIRCHRAYCGDGHRHEGVEDCDGSDFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT

>gi568815595r:15275376_15475645|GENSCAN_predicted_CDS_9|903_bp
ggtgaaaaaggtgacctgggtatgatgggcttgccagggtcaagaggaccaatgggctcc
aagggctaccctggatccagaggggaaaagggatccagaggtgaaaagggtgacctgggt
cccaaaggagaaaagggtttcccaggatttcctggaatgttggggcagaaaggtgaaatg
ggtccaaaaggtgaacctgggatagcaggacaccgaggacccacaggaagaccaggaaaa
cgaggcaagcagggacagaaaggggatagtggagttatgggcccaccaggcaagcctggg
ccttctggtcaacctggccgtccggggcccccaggccccccacctgcaggacaacttata
atgggacccaaaggggaaagaggatttcccgggcctccaggaagatgtctttgtggaccc
actatgaatgtgaataacccttcctacggggaatctgtgtatgggcccagttccccgcga
gttcctgtgatttttgtggtcaacaaccaggaggagcttgagaggctgaacacccaaaac
gccattgccttccgcagagaccagagatctctgtacttcaaggacagccttggctggctc
cccatccagctgacccctttctaccctgtggattacactgcagaccagcacggcacctgt
ggggatgggctcctgcagcctggggaggagtgtgacgacggtaacagcgatgtgggtgac
gactgcatccgctgtcaccgtgcctactgtggagatggtcaccggcatgagggtgtggag
gactgtgacggctctgactttggctacctgacatgcgagacctatctccctgggtcatat
ggagacctgcaatgcacccagtactgctacatcgactccacgccctgccgctacttcacc
tga