GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:18:46

Sequence gi568815595f:68045004_68245627 : 200624 bp : 37.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    819    814    6                               1.05
 1.05 Term -   2983   2891   93  1  0   69   47    84 0.004  -0.75
 1.04 Intr -  19032  18976   57  0  0  105   93    57 0.032   6.06
 1.03 Intr -  25129  24865  265  0  1   43   39   179 0.022   5.09
 1.02 Intr -  29558  29291  268  0  1   85   99   175 0.824  13.97
 1.01 Init -  31665  31533  133  0  1   78   47    27 0.662  -2.05
 1.00 Prom -  31789  31750   40                              -3.65

 2.04 PlyA -  32553  32548    6                               1.05
 2.03 Term -  33339  32729  611  1  2   74   38   217 0.679   8.97
 2.02 Intr -  34115  33490  626  1  2  -49   40   350 0.251   7.46
 2.01 Init -  36430  35859  572  1  2   88  102   530 0.877  49.00
 2.00 Prom -  40156  40117   40                              -5.15

 3.00 Prom +  42425  42464   40                              -7.45
 3.01 Init +  54831  54946  116  2  2   92   54    48 0.365   1.54
 3.02 Intr +  56531  56666  136  2  1   93   33   107 0.343   5.35
 3.03 Term +  78176  78466  291  1  0   57   38   159 0.014   2.16
 3.04 PlyA +  78759  78764    6                               1.05

 4.00 Prom +  81534  81573   40                              -5.85
 4.01 Sngl +  82690  83055  366  0  0   76   43   416 0.524  29.74
 4.02 PlyA +  83970  83975    6                               1.05

 5.05 PlyA -  84545  84540    6                               1.05
 5.04 Term -  87189  87024  166  2  1   72   44   136 0.227   4.01
 5.03 Intr -  92519  92443   77  2  2   86   85    46 0.436   1.49
 5.02 Intr -  92816  92598  219  2  0   84   94    57 0.440   3.48
 5.01 Init -  93324  93313   12  0  0   72   65    13 0.267  -3.07
 5.00 Prom -  94174  94135   40                              -4.45

 6.00 Prom +  97934  97973   40                              -7.65
 6.01 Sngl + 100001 100630  630  1  0   70   38   582 0.633  47.33
 6.02 PlyA + 100767 100772    6                               1.05

 7.00 Prom + 103365 103404   40                              -5.05
 7.01 Init + 104446 104553  108  0  0   76   63   127 0.592   9.27
 7.02 Term + 125438 125605  168  1  0   71   40   119 0.161   2.30
 7.03 PlyA + 126419 126424    6                               1.05

 8.00 Prom + 127678 127717   40                              -4.85
 8.01 Init + 129342 129516  175  2  1   80   56   167 0.787  12.26
 8.02 Term + 129970 130100  131  2  2   53   49   122 0.753   2.16
 8.03 PlyA + 131485 131490    6                               1.05

 9.00 Prom + 133624 133663   40                              -5.25
 9.01 Init + 141227 141348  122  1  2   66   92    73 0.455   5.21
 9.02 Intr + 143963 144086  124  2  1  114   93    15 0.474   4.27
 9.03 Term + 192137 192325  189  1  0   34   37   167 0.162   2.67
 9.04 PlyA + 193376 193381    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  25129  24748  382  0  1   43   39   262 0.958  10.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_1|271_aa
MEYYTAIKNDEFMSFVGTWMKLESIILSKLSQEQKTKHRIFSLVVSSYPFAVGIFVFLLF
IDEEIETSRSLIFAQGHRAGNSYTGIQPQEFELEHQSLPLSFYTASKAGVPNPQTTDQYQ
STAYQELDHTVGGSVEGNVGLEPPHRVSAGALLSESVRRWQSSPSPQNGRATDTLHHAPG
KAIDTQCQPVKEARRETIPCKGTEVELPKTMGTHLLHQCDLDSNVGFQLNSCKPQETHIG
KKMVTAAVSIIPYKHVANFIHSHNLEGPCSD

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_1|816_bp
atggaatactatacagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaattggaaagcatcattctcagtaaactatcacaagaacaaaaaaccaaacaccgcata
ttctcactcgtagtgtcatcatatccctttgctgtaggcatttttgttttccttcttttt
attgatgaggaaattgagacttcaagaagtttaatatttgcccaaggtcatagagcagga
aatagttacactgggatacaacctcaggaatttgaacttgagcatcagagtcttccgtta
agcttctatacagcctctaaggcaggggttcccaatccccagaccacggaccagtaccag
tccacagcctatcaggaactggaccacacagtaggagggagtgtggaaggaaatgtagga
ttagagcccccacacagagtctctgctggggcactgcttagtgaatctgtgagaagatgg
caatcatcccccagtccccagaatggtagagccactgacaccttgcaccatgcgcctgga
aaagccatagacactcaatgccagcccgtgaaagaagccaggagggagaccataccctgc
aaaggcacagaggtggagctgcccaagaccatgggaacccacctcttgcatcagtgtgac
ctcgatagtaatgtaggattccagctgaattcctgtaagccacaggaaactcacattgga
aagaagatggttactgcagctgtaagcatcatcccttacaagcatgtggccaacttcatc
cattcgcataatctggaaggcccttgcagtgattga

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_2|602_aa
MGNKQNRKTGNSKKQSASPPPKERRSSPATEQSWMENDFDELREEGFRRSNYSELWEDIQ
TKGKEVENFEKNLEECITTITNTKKCLKELMEMKTKARELREECRSPRSRCDQLEERVSV
MEDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLAREYYKHLYADKLENLEEVDKFLDTYPLPRLNQEEVESLNRPITGSEIVAT
INSLPAKKSTGPDGFTAEFYQRYKEELLPFLLKLFQSIEKEGILPNSFYEDSIILIPKPG
RDTTKKENFRPMSLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIHKSIN
VIQHINRAKDKNHMIISIDAEKASDKIQQPFMLKTLNKLVLEVLARAIRQEKEIKGIQLG
KEEVKLSLFADDMIVYLENPIVSAQNLLKLIRNFSRVSGYKINVQKSQAFLYTNNRQTES
QIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKKIPCSWVGRIN
IVKVSILPKVIYRFNAIPIKLPMPFFTELEKNYFKVHMEPKKSPHRQVYPKPKEQSWRHH
TT

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_2|1809_bp
atggggaacaaacagaacagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaacgcaggtcctcaccagcaacggaacaaagctggatggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctatgggaggacattcaa
accaaaggcaaagaagttgaaaacttcgaaaaaaatttagaagaatgtataactacaata
accaatacaaagaagtgcttaaaggagctgatggagatgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagccccaggagccgatgcgatcaactggaagaaagggtatcagtg
atggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaagagaatactacaaacacctctatgcagat
aaactagaaaatctagaagaagtggataaattcctggacacataccctctaccaagacta
aaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgtggcaaca
atcaatagcttaccagccaaaaagagtacaggaccagatggattcacagccgaattctac
cagaggtacaaggaggagctgctaccattccttctgaaactattccaatcaatagaaaaa
gagggaatcctccctaactcattttatgaggacagcatcattctgataccaaagccaggc
agagacacaacaaaaaaagagaattttagaccaatgtccttgatgaacattgatgcaaaa
atcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccat
gatcaagtgggcttcatccctgggatgcaaggctggttcaatatacacaaatcaataaat
gtaatccagcatataaacagagccaaagacaaaaaccacatgattatctcaatagatgca
gaaaaggcctctgacaaaattcaacaacccttcatgctaaaaactctcaataaattagtg
ttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtattcaattagga
aaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaacccc
attgtctcagcccaaaatctccttaagctgataaggaacttcagcagagtctcaggatac
aaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatc
cagcttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaa
ataaaagaggatacaaacaaatggaagaagattccatgctcatgggtaggaagaatcaat
atcgtgaaagtgtccatactgcccaaggtaatttacagattcaatgccatccccatcaag
ctaccaatgcctttcttcacagaattggaaaaaaactactttaaagttcatatggaacca
aaaaagagcccgcatcgccaagtctatcctaagccaaaagaacaaagctggaggcatcac
actacctga

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_3|180_aa
MPFAATYMQLEATVLSKINTVTEKQISHIFTYKWELNIRDMDEGVISKALNDKSKGYSVG
IAFHVLKRKKEHTSSTKKQYFPCLMLRCIVSAEEWRKVEALTREKGRQEHRDWAVAFGIA
SKGLAKGPLGLHISQSTWGGGMLSNKNTRMKDTEEEHGENGKQSFPLAQLCPNVEESCLR

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_3|543_bp
atgccctttgcagcaacatacatgcagctggaggccactgtccttagcaaaattaacaca
gtaacagaaaagcaaatatcacatattttcacctataagtgggagctaaacattagggac
atggatgaaggtgtgatttcaaaggctttgaatgacaagtcaaaaggttattcagtagga
atagccttccatgttttgaagaggaaaaaggagcacacaagcagtactaaaaagcaatac
ttcccatgtcttatgctaagatgcattgtgagtgcagaagagtggaggaaagtagaggca
ctcaccagggagaaggggcgacaggagcacagagactgggctgttgccttcggaatagca
tctaagggcttggcaaagggtccacttggtttacatatttctcaaagtacctggggagga
gggatgttgtccaataaaaacacacggatgaaggacactgaagaggaacatggagagaat
ggaaaacagtcatttcctcttgcgcaactttgccccaatgtagaggagtcctgcctgaga
taa

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_4|121_aa
MVVVVMLMAVVVVAVVMMVAVVMLMAVVMVVVVMLMAVVVVVVMVVVMLIAVVVVVVVMI
MVVVMLMAVVVVVVVMLMALVVVVMMLMEVVMVVVMMMVLVIIMITSVYYGSEALPLPES
S

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_4|366_bp
atggtggtggtggtgatgctgatggcagtggtggtggtggcggtggtgatgatggtagcg
gtggtgatgctgatggcagtggtgatggtggtggtggtgatgctgatggcagtggtggtg
gtggtggtgatggtggtggtgatgctgatagcagtggtggtggtggttgtggtgatgatt
atggtggtggtgatgctgatggcagtggtggtggtggttgtggtgatgcttatggcactg
gtagtggtggtgatgatgctaatggaagtggtgatggtggtggtgatgatgatggtattg
gtaataataatgataactagtgtttattatggttcggaagctctacctctccctgagtcc
tcataa

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_5|157_aa
MFLVFLWEKAKFKCQPDVKMTYLGLSLQASCDLLFMVHFLATADQHNHRFKGRPYEGNDL
CDRNLSFYLFLLHSNLEEPIKFLELSIMQYCTVPLLTAAVTHRDMDEAGNHHSQQTNTET
ENQTPLVLTHKWKVNNENTWTQREEHHTLGPVRGMRG

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_5|474_bp
atgtttctcgtgtttttatgggaaaaggccaagtttaagtgccagccagacgtgaagatg
acctatctgggcctttccttacaggcctcttgtgatttactgtttatggttcactttctg
gccacagctgaccaacacaaccacaggttcaaaggacgtccatatgaaggcaatgacttg
tgtgataggaatctttccttttatctgtttctacttcactcaaacctagaggaacctatc
aagtttctagaactttctatcatgcagtattgcacggtcccacttcttactgctgctgtt
actcacagggacatggatgaagctggaaaccatcattctcagcaaactaacacagaaaca
gaaaaccaaacaccacttgttctcactcataagtggaaggtgaacaatgagaacacatgg
acacagagagaggaacatcacacacttgggcctgtccgggggatgaggggctag

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_6|209_aa
MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQRLALCLLRNDMNNARYLWKRI
PPATKSANSELGGIWSVGRRVWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRTFAL
VSQAYTSIITDDFAAFVGLPIEEAVKGLLEQGWQVDSTTRMVLPRKPVAGALDVSFNKFI
PLSEPAPLPPIPNEQQLARLTDYVAFLED

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_6|630_bp
atgccagtggcggtgatggcagaaagcgcctttagtttcaaaaagttgctggatcagtgc
gagaaccaggagctcgaggcccctggaggaattgctacacccccagtgtatggtcagcgt
ctagctttatgtttgctccgtaatgacatgaataatgcaagatatctttggaaaagaata
ccacctgctacaaaatctgcaaattctgaacttgggggaatttggtcagtaggacgaaga
gtctggcagagagatttccctgggatctatacaaccatcaacgctcatcagtggtctgag
acagtccagccaattatggaagcacttagagatgcaacaaggagacgcacctttgccctg
gtctctcaagcatatacttcaatcatcactgatgattttgcagcctttgttggacttcct
atagaagaggctgtgaaaggcttattagaacaaggatggcaagttgattccaccacaaga
atggttctgcccagaaagccagttgcaggggccctggatgtttcctttaacaagtttatt
cccttatcagagcctgctccacttcccccaatacccaatgaacagcagttagccagactg
acggattatgtggctttccttgaagactga

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_7|91_aa
MAPTSASDEGLKELPLMAEDKGDPVCGDRDPMAREELSEAAVQVAQKEADQNILKEKLGY
EISIEAFEMLQYISGNPEGNMHVQSCAYPQK

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_7|276_bp
atggcaccaacatctgcttctgatgagggtctcaaggagcttccactcatggctgaagac
aaaggggatccagtgtgtggagacagagatcccatggcaagagaggaactttctgaggca
gctgtacaagtggcacaaaaggaggctgaccaaaatattttaaaggaaaaactgggatat
gagatatccatagaggcatttgaaatgctccaatatatttctgggaatccagaaggcaac
atgcatgttcagagctgtgcttatccccagaaataa

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_8|101_aa
MGAGLSCRQEDRKMWESLELPGDLLNDFDKNADSDMNNKVQAEVVSGGDEELVGNWSKAQ
LLQPWLKGANEELRSWLQGMPASSLGSFPKVLSLQVYRNQE

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_8|306_bp
atgggggcaggtctttcctgccgccaagaagacagaaaaatgtgggaaagtttggaactt
cctggagacttgttgaatgactttgacaaaaatgctgatagtgacatgaacaataaggtc
caggctgaggtggtctccggtggagatgaggaacttgttgggaactggagcaaagcccag
ctgctccagccatggctgaaaggggccaatgaagagctcaggtcatggcttcaggggatg
ccagcttcaagccttggcagcttccccaaggtgctgagcttgcaagtgtacagaaatcaa
gaatga

>gi568815595f:68045004_68245627|GENSCAN_predicted_peptide_9|144_aa
MRILSFVARAITNQWITSKQVLVCFPNPFRRSTQNSLKPEQSRLVSSFRWSDFPIGGTLT
IMFSGTDLHQIKSLECDPKFWKVLETGKSMVKALADSVSGEGLPSGSQMVSSQCDLSGGR
NKATLWGLFRKGTSHICEGRALIT

>gi568815595f:68045004_68245627|GENSCAN_predicted_CDS_9|435_bp
atgaggattttgagttttgttgccagggcaattacaaaccagtggataacttctaaacag
gtcctggtgtgcttccctaaccctttccgcagaagtacccagaacagcctgaaaccagag
cagtccagactggtcagcagttttagatggtcagactttccaattggtggtacactaacg
attatgttctcagggactgatttgcaccaaataaaatccttggagtgtgacccaaaattt
tggaaggttctggagactggcaagtccatggtcaaagctctggcagattcagtgtctggt
gaaggcctgccttctggttcacagatggtgtcttctcaatgtgatctcagtggtggaagg
aacaaggcaactctctggggccttttccgtaaaggcactagtcacatttgtgagggcaga
gctctcatcacctaa