GENSCAN 1.0	Date run:  8-Nov-116	Time: 06:31:50

Sequence gi568815595f:49948254_50177130 : 228877 bp : 47.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  20025  20495  471  2  0   72   91   334 0.601  27.63
 1.02 Intr +  23806  23895   90  0  0   37   94    92 0.952   4.89
 1.03 Intr +  27070  27139   70  0  1   41  109    65 0.795   2.65
 1.04 Intr +  51187  51260   74  2  2   75    9   145 0.084   4.43
 1.05 Intr +  98463  98580  118  2  1   57   95    77 0.803   5.34
 1.06 Intr +  99284  99411  128  0  2   78   59    25 0.826  -1.00
 1.07 Intr +  99992 100066   75  1  0  117   91    72 0.964  10.11
 1.08 Intr + 106082 106142   61  1  1  102  113     9 0.779   3.11
 1.09 Intr + 110149 110309  161  2  2   46  101   204 0.741  17.21
 1.10 Intr + 111396 111493   98  2  2   57  116   103 0.998   8.81
 1.11 Intr + 112887 112968   82  0  1   75   84    45 0.619   2.44
 1.12 Intr + 113175 113294  120  2  0   11  109    72 0.555   2.29
 1.13 Intr + 113709 113855  147  2  0   51   90   109 0.944   7.83
 1.14 Intr + 116784 116873   90  2  0   31   63   124 0.843   4.39
 1.15 Intr + 117989 118249  261  1  0   89   62   292 0.999  24.38
 1.16 Intr + 120437 120511   75  1  0   65   82    73 0.932   4.11
 1.17 Intr + 122202 122299   98  2  2   68  115    58 0.952   5.31
 1.18 Intr + 126948 127077  130  0  1   62   83   107 0.999   8.30
 1.19 Term + 128755 128880  126  0  0   97   48   145 0.999   9.68
 1.20 PlyA + 128975 128980    6                               1.05

 2.00 Prom + 130433 130472   40                              -3.76
 2.01 Init + 142182 142198   17  2  2   83  115    10 0.986   2.88
 2.02 Intr + 143790 143955  166  0  1   48  105   121 0.978   9.76
 2.03 Intr + 145467 145622  156  2  0   79   67   215 0.749  18.71
 2.04 Intr + 154830 154913   84  2  0  102  121     6 0.777   5.32
 2.05 Intr + 155995 156055   61  0  1   52   91    10 0.794  -3.99
 2.06 Intr + 156824 156889   66  0  0   95   92    58 0.978   5.78
 2.07 Intr + 157296 157456  161  1  2   75   77   175 0.969  14.81
 2.08 Intr + 158514 158611   98  2  2   95   87    13 0.978   0.71
 2.09 Intr + 159229 159316   88  1  1   66  110    77 0.995   7.67
 2.10 Intr + 159817 159894   78  0  0   43   96    41 0.524   0.15
 2.11 Intr + 162126 162210   85  2  1   88  103    17 0.967   2.59
 2.12 Intr + 162426 162517   92  1  2   76   38   155 0.917   9.01
 2.13 Intr + 165130 165291  162  0  0   83   66   131 0.993  10.57
 2.14 Intr + 165927 165998   72  2  0   98   78    60 0.964   5.60
 2.15 Intr + 167175 167354  180  2  0  120   32   223 0.947  19.96
 2.16 Intr + 168821 168945  125  1  2   65   62   244 0.959  18.88
 2.17 Intr + 168997 169126  130  1  1   85   99   179 0.992  19.40
 2.18 Term + 170078 170203  126  1  0   98   54   135 0.994   9.38
 2.19 PlyA + 170980 170985    6                              -0.45

 3.07 PlyA - 171627 171622    6                               1.05
 3.06 Term - 171800 171770   31  1  1   44   48    42 0.181  -6.87
 3.05 Intr - 172758 172659  100  1  1   60   93   110 0.408   7.87
 3.04 Intr - 174335 174272   64  2  1  140   94     4 0.570   4.49
 3.03 Intr - 175638 175612   27  0  0  118   90    26 0.687   4.11
 3.02 Intr - 180450 180345  106  2  1  109   94    -8 0.432   2.12
 3.01 Init - 182677 182607   71  1  2   98   80    57 0.752   5.94
 3.00 Prom - 184709 184670   40                              -6.96

 4.00 Prom + 198588 198627   40                              -4.86
 4.01 Init + 202296 202362   67  2  1   91   92    46 0.084   6.53
 4.02 Intr + 203346 203455  110  1  2   27   36   114 0.049   0.10
 4.03 Intr + 207138 207311  174  2  0   26  105   167 0.205  12.34
 4.04 Intr + 211439 211481   43  1  1   96  116     4 0.110   1.81
 4.05 Intr + 222567 222767  201  1  0   91   47    49 0.287   0.36
 4.06 Intr + 225540 225730  191  1  2   80   35   488 0.530  42.00
 4.07 Intr + 225799 225861   63  0  0  105   92    75 0.389   8.51
 4.08 Intr + 225978 226097  120  2  0   75  115   144 0.977  16.49
 4.09 Intr + 226843 226935   93  0  0  135   80    15 0.933   5.56
 4.10 Intr + 228515 228608   94  1  1  111   70   145 0.891  14.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 140819 140460  360  2  0   65   49   217 0.893  11.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:49948254_50177130|GENSCAN_predicted_peptide_1|824_aa
MPPVDPNILDYIQPSTQDREHSGMNVNRREESTHDHTIERPAFGIQKGEFEHSETREGET
QGVAFEHESPADFQNSQSPVQDQDKSQLSGREEQSSDAGLFKEEGGLDFLGRQDTDYRSM
EYRDVDHRLPGSQMFGYGQSKSFPEGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSGVP
EDATKEEILNAFRTPDGMPVKNLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQARLPV
PNTEQKLVNETGDPSVKTKGKRKMKQEIPSLQPRYFPKGLLANGCSSDLRASSLYRLQAR
VIPPPPLLLPPANQFPAGTLMIQDKEVTLEYVSSLDFWYCKRCKANIGGHRSSCSFCKNP
REAIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALR
VVKILQNLDPPFSIDGKMVAVNLATGKRRVKNISEIGGEVAEIQTGLQIQIDKDNSRLTL
ALILLPLASSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTS
QGKSSSKKEMSKRDGKEKKDRGVTRENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVN
PLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLL
CRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREK
LQSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLAS
SEEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD

>gi568815595f:49948254_50177130|GENSCAN_predicted_CDS_1|2475_bp
atgccccctgtggatccaaatattttggattacattcagccctctacacaagatagagaa
cattctggtatgaatgtgaacaggagagaagaatccacacatgaccatacgatagaaagg
cctgcttttggcattcagaagggagaatttgagcattcagaaacaagagaaggagaaaca
caaggtgtagcctttgaacatgagtctccagcagactttcagaacagccaaagtccagtt
caagaccaagataagtcacagctttctggacgtgaagagcagagttcagatgctggtctg
tttaaagaagaaggcggtctggactttcttgggcggcaagacaccgattacagaagcatg
gagtaccgtgatgtggatcataggctgccaggaagccagatgtttggctatggccagagc
aagtcttttccagagggcaaaactgcccgagatgcccaacgggaccttcaggatcaagat
tataggaccggcccaagtgaggagaaacccagcaggcttattcgattaagtggggtacct
gaagatgccacaaaagaagagattcttaatgcttttcggactcctgatggcatgcctgta
aagaacttgcagttgaaggagtataacacaggttacgactatggctatgtctgcgtggag
ttttcactcttggaagatgccatcggatgcatggaggccaaccaggccagattacctgtc
cctaatactgagcagaagctggtgaatgaaacaggagatccctcagtcaaaacaaaagga
aaaagaaaaatgaaacaggagatcccttctctacagcccagatactttcccaaaggctta
cttgccaatggttgctcctcagatctcagggctagctcactctataggctccaagccaga
gtgataccgccgccgccgctgttgctcccaccagccaatcagtttcctgctggaactcta
atgatccaggacaaagaagttaccctggagtatgtatcaagcctggatttttggtactgc
aaacgatgtaaggcaaacattggtgggcaccgatcttcctgttcattctgcaagaaccca
agagaagctatcatgctaaagcgtatctatcgttccacaccacctgaggtgatagtggaa
gtgctggagccctatgtccgccttactactgccaacgtccgtatcatcaagaacagaaca
ggccctatggggcatacctatggctttattgacctcgactcccatgcggaagctcttcgt
gtggtgaagatcttacagaaccttgatccgccatttagcattgatgggaagatggtagct
gtaaacctggccactggaaaacgaagggtaaaaaatatttccgagataggaggggaggtg
gcagaaattcagactggtcttcagatacaaatcgacaaggacaacagtagactaacattg
gctctgatcttgttacctttagcatcatctgactgctacatatatgattctgctactggc
tactattatgaccccttggcaggaacttattatgaccccaatacccagcaagaagtctat
gtgccccaggatcctggattacctgaggaagaagagatcaaggaaaaaaaacccaccagt
caaggaaagtcaagtagcaagaaggaaatgtctaaaagagatggcaaggagaaaaaagac
agaggagtgacgagggaaaatgccagtgaagggaaggcccctgcagaagacgtctttaag
aagcccctgcctcctactgtgaagaaggaagagagtccccctccacctaaagtggtaaac
ccactgatcggcctcttgggtgaatatggaggagacagtgactatgaggaggaagaagag
gaggaacagacccctcccccacagccccgcacagcacagccccagaagcgagaggagcaa
accaagaaggagaatgaagaagacaaactcactgactggaataaactggcttgtctgctt
tgcagaaggcagtttcccaataaagaagttctgatcaaacaccagcagctgtcagacctg
cacaagcaaaacctggaaatccaccggaagataaaacagtctgagcaggagctagcctat
ctggaaaggagagaacgagagggaaagtttaaaggaagaggaaatgatcgcagggaaaag
ctccagtcttttgactctccagaaaggaaacggattaagtactccagggaaactgacagt
gatcgtaaacttgttgataaagaagatatcgacactagcagcaaaggaggctgtgtccaa
caggctactggctggaggaaagggacaggcctgggatatggccatcctggattggcttca
tcagaggaggctgaaggccggatgaggggccccagtgttggagcctcaggaagaaccagc
aaaagacagtccaacgagacttaccgagatgctgttcgaagagtcatgtttgctcgatat
aaagaactcgattaa

>gi568815595f:49948254_50177130|GENSCAN_predicted_peptide_2|648_aa
MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP
ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDKKLVIQG
KHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDY
YCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDAS
QLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQS
QSGEGGSVDYSYLQPGQDGYAQYAQTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTST
YQYDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPP
AKEGKEKKEKPKSKTAQQGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELV
ERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKMKYRDRAAERREKYGIPE
PPEPKRKKQFDAGTVYVMCTFSSSNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQ
GITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME

>gi568815595f:49948254_50177130|GENSCAN_predicted_CDS_2|1947_bp
atgggttcagacaaaagagtgagtagaacagagcgtagtggaagatacggttccatcata
gacagggatgaccgtgatgagcgtgaatcccgaagcaggcggagggactcagattacaaa
agatctagtgatgatcggaggggtgatagatatgatgactaccgagactatgacagtcca
gagagagagcgtgaaagaaggaacagtgaccgatccgaagatggctaccattcagatggt
gactatggtgagcacgactataggcatgacatcagtgacgagagggagagcaagaccatc
atgctgcgcggccttcccatcaccatcacagagagcgataaaaagttggtgattcaagga
aagcacattgcaatgcattatagcaatcccagacctaagtttgaagattggctttgtaac
aagtgctgccttaacaatttcaggaaaagactaaaatgcttccgatgtggagcagacaag
tttgactctgaacaggaagtgcctcctggaaccacagagtcggttcagtctgtggattac
tactgtgatacgatcattcttcggaacatagctccgcacactgtggtggattccatcatg
acagcactgtctccttacgcgtctttagctgtcaataacatccgcctcataaaagacaaa
cagacccagcagaacagaggcttcgcatttgtgcagctgtcctctgcaatggatgcttct
cagctgcttcagatattacagagtctccatcctcctttgaaaattgatggcaaaactatt
ggggttgattttgcaaaaagtgccagaaaagacttggtcctctcagatggtaaccgcgtc
agcgctttctctgtagctagtacggctattgctgctgctcagtggtcatccacccagtct
caaagtggtgaaggaggcagtgttgactacagttatctgcaaccaggtcaagatggctat
gcccaatatgctcagactgaggaagcacagcctagcactagcacaagtacacaggcccca
gccgcttcccctactggtgtagttcctggtaccaaatatgcagtacctgacacgtccact
taccagtatgatgaatcttcaggatattactatgatccgacaacagggctctattatgac
cccaactcgcaatactactataattccttgacccagcagtacctttactgggatggggaa
aaagagacctacgtgccagctgcagagtctagctcccaccagcagtcgggcctgcctcct
gcaaaagaggggaaagagaagaaggagaaacccaagagcaaaacagcccagcagggagcc
ttagctgaaaggcagcagctcatcccagaattggtgcgaaatggagatgaggagaatccc
ctcaaaaggggtctggttgctgcttacagtggtgacagtgacaatgaggaggagctggtg
gagagacttgagagtgaggaagagaagctagctgactggaagaagatggcctgtctgctc
tgccggcgccagttcccgaacaaagatgccctagtcaggcaccagcaactctcagacctt
cacaagatgaaataccgagaccgagctgcagaaagacgggagaagtacggcattccagaa
cctccagagcccaagcgcaagaagcagtttgatgccggcactgtgtatgtgatgtgcaca
ttttccagttcgaattacgagcaacccaccaaagatggcattgaccacagtaacattggc
aacaagatgctgcaggccatgggctggcgggaaggctctggcttgggacgaaagtgtcaa
ggcattacggctcccattgaggctcaagttcggctaaagggagctggcctaggagccaaa
ggcagcgcatatggtttgtcgggcgccgattcctacaaagatgctgtccggaaagccatg
tttgcccggttcactgagatggagtga

>gi568815595f:49948254_50177130|GENSCAN_predicted_peptide_3|132_aa
MASAQEFRGDTGASGGLLPPGLPRTMPCGVHPLQPQRLQMVPHSSPGLYPNTQEHLEPQV
WLQVLEGKGTGRHPKTQLTPGLDLNLVPAGTLSFMFIGKATLVLTTDAVVHSTHGRALSS
FDRTSLAAEKMQ

>gi568815595f:49948254_50177130|GENSCAN_predicted_CDS_3|399_bp
atggcctcggcacaggaattccgaggggatactggagcctcgggcgggctgctgcctcct
gggctgcccaggaccatgccatgtggggtgcatcccctgcagccccagagactacaaatg
gtgccccatagtagcccgggcctatatccaaacacacaggagcacctggaacctcaggta
tggctgcaggtgttagaagggaagggcactgggaggcatcccaagacccagctcactcca
gggctggacctcaaccttgtacctgcaggaaccctcagcttcatgttcataggaaaggcc
acgctggtgttgacaacagatgccgtggtccacagcacacatgggagagccttgagcagc
tttgacaggacctccttagcagctgagaagatgcagtga

>gi568815595f:49948254_50177130|GENSCAN_predicted_peptide_4|386_aa
MRTGFLGDDACLDLEGDKKDIPGGGWANDFPVVTLTVGSVTPHKLQDLKTMKSTLKLSQP
AEPVKPRPRRRSRLRRSGERSRAGPWPRGAASADRPNGSRSVPPPPPGRPGPAAAEEDHL
PATPRVRLSFKVTKASRPVTPEPLTPYPVATGRGPAGPESCALSTGSESPSGPGPPGRQS
LPPGLASPGPPPPSAMDLELKATGTAHFFNFLLNTTDYRILLKDEDHDRMYVGSKDYVLS
LDLHDINREPLIVRAGPDVGRGIHWAASPQRIEECVLSGKDVNGECGNFVRLIQPWNRTH
LYVCGTGAYNPMCTYVNRGRRAQATPWTQTQAVRGRGSRATDGALRPMPTAPRQDYIFYL
EPERLESGKGKCPYDPKLDTASALIX

>gi568815595f:49948254_50177130|GENSCAN_predicted_CDS_4|1158_bp
atgaggactggcttcctaggagatgatgcctgtctggatctagaaggagacaagaaagac
attccaggtgggggctgggccaatgacttccctgttgtaaccctcactgttggctcggtc
acccctcacaagctccaggacctcaagactatgaagtccaccctgaagctcagccagccc
gcggaaccggttaagccgcggccgcggcgccgatcccggctgaggcgcagcggcgagagg
tcgcgggcagggccatggccccggggggccgctagcgcggaccggcccaacgggagccgc
tccgtgccgccgccgccgcccgggcgcccaggccccgccgctgcggaagaggaccacctc
ccggccacgccccgggtccggctctcattcaaagtgaccaaagcgtcacgtcctgtgaca
ccagagccattgacgccatatcccgtggccactgggaggggtcccgcaggtcctgagtca
tgtgccctgtccacggggagcgagtcaccttccggccctggccctcctggcaggcagtct
ctaccaccaggactggcttcccctgggcctccccctccttcagccatggacctagagctg
aaggccacaggcaccgcccacttcttcaacttcctgctcaacacaaccgactaccgaatc
ttgctcaaggacgaggaccacgaccgcatgtacgtgggcagcaaggactacgtgctgtcc
ctggacctgcacgacatcaaccgcgagcccctcattgtaagggctggccctgatgtggga
cgtgggatacactgggcagcctccccacagcgcatcgaggaatgcgtgctctcaggcaag
gatgtcaacggcgagtgtgggaacttcgtcaggctcatccagccctggaaccgaacacac
ctgtatgtgtgcgggacaggtgcctacaaccccatgtgcacctatgtgaaccgcggacgc
cgcgcccaggccacaccatggacccagactcaggcggtcagaggccgcggcagcagagcc
acggatggtgccctccgcccgatgcccacagccccacgccaggattacatcttctacctg
gagcctgagcgactcgagtcagggaagggcaagtgtccgtacgatcccaagctggacaca
gcatcggccctcatcann