GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:23:30

Sequence gi568815595f:160577347_160777922 : 200576 bp : 38.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5566   5644   79  0  1   62   83    73 0.744   5.47
 1.02 Intr +   7744   7892  149  2  2   47   37    72 0.538  -2.97
 1.03 Intr +   8050   8264  215  0  2   60  100   148 0.913   9.79
 1.04 Term +   8887   9301  415  1  1   34   34   189 0.901   1.85
 1.05 PlyA +   9879   9884    6                               1.05

 2.00 Prom +  14028  14067   40                              -7.85
 2.01 Init +  20559  20610   52  2  1   60  100    43 0.381   4.07
 2.02 Intr +  35541  35630   90  1  0   57   42   117 0.075   3.05
 2.03 Term +  45413  45540  128  0  2  118   44   148 0.464  10.86
 2.04 PlyA +  46688  46693    6                               1.05

 3.07 PlyA -  46958  46953    6                               1.05
 3.06 Term -  47234  47151   84  2  0   61   50    94 0.012  -0.43
 3.05 Intr -  63204  63076  129  0  0  115   65    46 0.006   4.97
 3.04 Intr -  73477  73390   88  0  1   90   66    35 0.004   0.55
 3.03 Intr -  77176  77069  108  0  0  108   13    83 0.010   1.28
 3.02 Intr -  87448  87375   74  1  2   62   62   117 0.067   3.79
 3.01 Init -  92085  92041   45  0  0   77   90    56 0.675   3.44
 3.00 Prom -  95787  95748   40                              -5.75

 4.00 Prom +  97920  97959   40                              -4.45
 4.01 Init +  99595  99675   81  0  0   64   96    77 0.800   7.12
 4.02 Intr + 100103 100452  350  1  2   15   84   404 0.426  25.93
 4.03 Intr + 100482 100628  147  0  0   80   53    97 0.246   3.83
 4.04 Term + 126174 126369  196  0  1   66   37   133 0.114   1.90
 4.05 PlyA + 126733 126738    6                               1.05

 5.07 PlyA - 126825 126820    6                              -0.45
 5.06 Term - 127223 127068  156  2  0   98   38    53 0.038  -1.75
 5.05 Intr - 130985 130856  130  1  1   -2   94   108 0.089   2.18
 5.04 Intr - 137465 137352  114  1  0   87   79   115 0.297   9.14
 5.03 Intr - 142060 142003   58  2  1   94   56    30 0.276  -2.58
 5.02 Intr - 143035 142677  359  0  2   98   73   141 0.134   7.57
 5.01 Init - 148495 148488    8  1  2   64   94     0 0.374  -1.25
 5.00 Prom - 151024 150985   40                              -1.95

 6.00 Prom + 158526 158565   40                              -4.65
 6.01 Init + 172113 172232  120  2  0   51   64   177 0.708  11.84
 6.02 Intr + 177188 177444  257  1  2   52  -31   198 0.394  -0.38
 6.03 Intr + 177506 177884  379  2  1   50   32   278 0.102  12.44
 6.04 Intr + 178360 178685  326  0  2   79  -39   223 0.087   2.35
 6.05 Intr + 179058 179361  304  0  1   41   75   415 0.112  31.17
 6.06 Term + 179877 180149  273  2  0   90   37    91 0.336  -1.31
 6.07 PlyA + 180885 180890    6                              -0.45

 7.03 PlyA - 181069 181064    6                               1.05
 7.02 Term - 182608 182597   12  1  0  123   42     4 0.004  -3.47
 7.01 Init - 197438 197250  189  2  0   88  116    97 0.794  11.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  81250  81041  210  1  0   72   41   146 0.869   3.24
S.002 Init + 179008 179361  354  0  0   79   75   519 0.834  44.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_1|285_aa
MKEDSKKGSKRREGTKPPENKNQNGIKKLADIPNLLCIVERLCTRGSIQPVNQRLKRKRR
RFNTKAVGGDKVEGTQRQEGGFREGAGQWLLTCDWIFGSQLSSSMKNTQEICHCHLHKSC
YQQCENPKTSYSYLLQEEEAVEAQTLGSNGSPGQINREEKEIKGIQIRKEKVELLLFTDN
IILYLEKPQDATKNLLEVITKLDKVVGYKINIQKSIAFIYGNSEQSEKEIKKAIPFKIAT
NKIKYLRINLIKEMKDLYKENYKTLIKTVEEDTNKRYSMLVDWKN

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_1|858_bp
atgaaagaagacagcaagaaaggaagtaagaggagagaaggtacaaaaccaccagaaaat
aagaatcaaaatggcattaagaaattggcagatattcccaatctgctatgtattgtggaa
aggttatgtacaagaggaagtattcagccagtaaatcaaagattgaaaagaaaaaggaga
aggtttaatacaaaagcagttggtggtgacaaagttgaaggtactcagaggcaagagggt
ggttttcgtgaaggagctgggcagtggcttctcacttgtgactggatctttggttctcag
ttgagttcttctatgaagaacacacaagaaatttgtcattgccacctccacaaaagttgt
tatcagcaatgtgaaaatcctaaaacatcttactcatacttacttcaagaagaagaagct
gtggaagcccagacactgggaagtaatggaagtcctggccagatcaatagggaagagaaa
gaaataaagggcatccagattagaaaggaaaaagtcgaattactcttgttcacagataac
ataatcttatacttagagaaacctcaagatgccaccaaaaacctgttagaagttattaca
aaactcgataaagttgtaggatacaaaatcaacatacaaaaatccatagcatttatatac
ggcaacagtgaacaatctgaaaaagaaatcaagaaagcaatcccatttaaaatagctaca
aataaaataaaatacctaagaatcaacttaatcaaagaaatgaaagatctatacaaagaa
aactataaaacactgataaaaacagttgaagaggacacaaacaaaagatattccatgctt
gtggattggaagaattaa

>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_2|89_aa
MLLAETLNGKLTTNHSQAVGEVPPDPGFMGIKQQVVAAGTYLLESSHENRDDHMTRNVSK
HFLLYVDENLPSVEEIETGSCEREHEDIA

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_2|270_bp
atgctgttagcagaaacactgaatggtaaacttacaacaaatcattctcaagctgttgga
gaggttccaccagatcctgggttcatgggtatcaagcagcaggtggtggcagcagggacg
tatctgctggaaagttcccatgagaacagagatgaccacatgaccaggaatgttagtaaa
cattttctcctctacgtggatgaaaacctgccttcagtagaagagattgagacaggcagc
tgtgagagagagcatgaggacattgcctga

>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_3|175_aa
MLWLTPVILALWDAEAHSGTAFPTSLRLDGALQLVRANELKRSLSLRPSPPSVHGDFCQA
ITDVHLKPKDPSVSLCIPGLSSMPMSWQNTADTIMLQTIPGYYPPVRRHPNSELTARQPS
YPVPGGMDHHRLHCAGQRVPDPVVPAAETCALGEMLCLNGPNLSEYGYECECALQ

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_3|528_bp
atgctgtggctcacgcctgtaatcctagcactttgggacgccgaggcgcacagtggcacg
gcatttcctacttccttgcggttagatggtgccctgcaactggttcgggccaatgagtta
aagaggagcctctccctgcggccctctccaccatcagtccatggggatttctgccaggcc
attactgatgttcacttaaagcccaaggacccttccgtcagcttgtgcatcccagggctc
tcctcaatgcccatgtcctggcagaacactgcagataccataatgctgcagactatccct
ggttattatccaccggtaagaaggcatcctaatagtgaactcacagctagacagccttcc
tacccagtcccaggtggcatggaccaccacagacttcactgtgcagggcagagagtgcct
gatcctgtagtacctgcagcagagacatgcgcattaggtgaaatgttgtgtctaaatggt
cccaatctgagtgagtatgggtatgagtgtgagtgtgccctgcaatga

>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_4|257_aa
MLLCVSEPSGSSRFLAPERKQNCSISQLAKDITTIPTIGFNVEMIELERNLSLTVWDVGG
QEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVPVVLLANKQDM
PGALTAEDITRMFKVKKLCSDRNWGGAGPGVQEINWICEEPHEIKRRHFGVLQAELRLRK
IQVSTETLMKLKGIVQWDDLLQPNGRPWKKKMIGLLVNCQPKECFESQKVSMAAHLLQTV
LKISSDLIIKWQYCKGD

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_4|774_bp
atgctcctctgcgtgtctgaaccttcaggttcctctagatttctagcacctgaaagaaaa
caaaactgcagcatcagccagcttgctaaggatattaccaccatccctacaataggtttc
aatgtggaaatgatcgagttggaaaggaatctttcactcacagtctgggatgttggagga
caggaaaaaatgagaactgtttggggctgttactgtgagaacaccgatgggctggtgtat
gttgtggacagtacagacaaacagcgactggaagagtctcagagacagtttgagcacatt
ttgaagaatgaacacattaaaaatgtgcctgttgttctattagccaacaaacaagacatg
cctggagctctgactgctgaggacatcaccagaatgttcaaagtgaagaagctttgcagt
gaccggaactggggaggggctggcccaggggttcaggaaattaactggatttgtgaagag
ccacatgaaatcaagaggagacactttggcgttcttcaagcagaactgaggctgcgaaaa
atccaagtctctacagagacactgatgaagttgaaagggattgtacagtgggatgatctc
ttacaaccaaatggaaggccttggaaaaagaaaatgataggtttgttagttaactgccaa
cccaaggaatgctttgaaagccagaaagtttctatggcagctcatctcctgcagactgtg
ctgaaaatcagctcagatctgattattaagtggcagtactgcaaaggagactag

>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_5|274_aa
MNTCSGLQGSLMQEPQLADRSYPSQASPVEGDTPCSPTSPLTQGYHPSQFSESEGTLAAW
VLPKLASLDQLGTAETGGITQSAIFMPPRGTQSCACQQNSDRGGFAVLESLTGVSRLARR
SQVSPCSLDGSQRGFLDDWLAGWDQDQILEATSSSLPHMCASSMWPITSTSQQGEALARQ
LKWLERRGERSRLLEKPEPVKFFNFEVQKQDHVYRKSSASDFWETGTIQPAENSYYQAFP
INTRGFSSVHSLLPQYREWLAHLENTDFEFLDLT

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_5|825_bp
atgaacacgtgttctggtctgcagggctccctcatgcaagagccacagctagcagacagg
tcatacccttcccaggccagccctgtggagggagacacaccctgctccccaaccagccca
ttaactcaggggtatcacccctctcagttttctgagagtgagggcaccctcgctgcttgg
gtgctgcccaagctggcaagtctcgaccagctaggaacagcagagacgggtggaatcacc
caatctgccatcttcatgcctcctcggggcacgcagagctgtgcttgccagcagaattca
gataggggtgggtttgctgtgttggaatccctaactggtgtgtctcgcctggctaggagg
agccaggtgtccccttgctcccttgatggatcccaacgtggtttcttagacgactggctt
gcagggtgggaccaggatcagatcctagaggccaccagtagttccttgcctcatatgtgc
gcttcctcaatgtggccaattacttctacaagccagcagggagaggctctagcaagacaa
ctgaagtggctggagagaagaggggaaagaagcaggctccttgagaaaccagaacctgtg
aaattttttaactttgaagtccagaaacaggaccacgtgtacaggaagagctcagcaagt
gatttttgggaaacagggacaattcagcctgcagaaaatagctattaccaagcttttcca
ataaatactaggggcttctcatcagtgcattccttattacctcagtacagagagtggttg
gcccatttggagaacacagattttgagttcttagaccttacataa

>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_6|552_aa
MERGEEPFKEFLISTGMAGENRLNSDFASNALVNLGYGYNRTRTLFFSRAFPLSRPTNTC
LPTFRVIFVGSCKPALFSAVATLRSSRLPPSLRLLPAMTEEVVGDHHLRASKGLSNLNRR
VRALAPSRAGKAFVATESPTPGAAAALRKSGPSRPSRGYRQSALPWGNRGHSVESPLSAV
LGREKAAGPRLAPRLSGDPGRPLLLNAETAASGPIVSLPLCKPGEVRPFSLALWLAKRGP
HYSAAAEGGNAHAPAKLLFSGAPGVCEGIGTFRHLRAPLRRRPRGPASLVRRALEPCASP
ADRSPESRGGTPGGTARAPAPLNSPAHRGRPAQRNFNLILLAQPGHQRLLLRRLLLPPPP
RLALWSYFFHTDEVKTIVKSSRDAVKMVKGKVAEIMQNDRLGGLDVLEAEFSKTWEFKNH
NVAVYSIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGEGGIRGAALRFFPTLSTLQ
VQSGQLTGAPRWPLVFTRISERDLDVPGLCRGGYARKGGGALTSPLRPGGLRGADVVLLL
DSFVCGSSGSRR

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_6|1659_bp
atggagagaggcgaggagccttttaaggagttcctcatcagcacaggtatggctggggaa
aatagattgaacagcgactttgcaagcaatgccctggtgaatttgggttatggctacaat
cggacgcgaacattgttcttttctcgtgctttcccactttcaagacccaccaacacctgc
ctgcccacatttcgagttatcttcgtcggctcctgcaagcccgcactcttctccgcggtg
gctactctccgctcatccagactcccgccctcactgcgccttcttcctgcgatgaccgag
gaggtggtgggagaccaccacttgcgagcttccaaaggactttcaaacctgaaccgcaga
gtcagagccctcgcgccgtcgcgagcagggaaggccttcgtggccactgagtcccctact
ccaggggcggcggccgctctccgaaagagcggcccttctcgtccctcccgaggttatcgt
cagagtgcacttccttggggaaacagaggtcattctgtcgagtcccccctttctgctgtt
ctcgggagggagaaggctgctggacccaggctcgctccccgcctctcgggagatccggga
aggcctctattgctgaacgccgagacagcggccagcggcccgatcgtctccctaccgctt
tgcaagccgggagaagtgcgtcccttctcgcttgccttatggctggcgaagcggggaccg
cactatagtgcagccgccgaaggggggaacgctcacgctcccgcaaaacttttattctct
ggggcccccggggtgtgtgaaggaattggaaccttccgccatctccgcgctccccttcgg
cggcgaccgaggggacctgcgtccctcgtccgccgggctctggagccctgcgcctcacct
gctgatcgctctccggagtctcgagggggcacccccggagggaccgcgcgggcgccggcg
cccctgaactctcccgctcaccgcggcagacccgcccagcgcaactttaacttgattctt
cttgcccaaccggggcaccagcggctgctgctgcggcggctgctgctaccgccgccgccg
cgcttggctctatggagttacttcttccacaccgacgaggtgaagaccatcgtgaagtcc
agccgggacgccgtgaagatggtgaagggcaaggtagccgagatcatgcagaacgatcga
ctcggggggcttgatgtgctcgaggccgagttttccaagacctgggagttcaagaaccac
aacgtggcggtgtactccatccagggccggagagaccacatggaggaccgcttcgaagtt
ctcacggatctggccaacaagacgcacccgtccatcttcgggatcttcgacgggcacggg
ggagagggaggaatccgaggggcagctctgcgcttctttccaactctatcaactttacaa
gtgcaatcgggccaattgacaggagcgcctcgctggccgcttgttttcactaggatctca
gagcgggacctagatgtccctggcctttgcagaggtggctatgcccgcaaaggaggcggt
gctttgacctcacccttgcgccctggcgggcttaggggtgcagacgtcgtcctgcttcta
gattcctttgtttgtggttcatctggaagcaggagatag

>gi568815595f:160577347_160777922|GENSCAN_predicted_peptide_7|66_aa
MTKQHFMEELEIEGNLEIRTRHPLPHGYVLTKRQQACVSIRYSVNSRDYFCCSADFCIGK
QQKVLL

>gi568815595f:160577347_160777922|GENSCAN_predicted_CDS_7|201_bp
atgaccaagcaacattttatggaagagctggaaatcgaggggaaccttgaaataaggaca
agacatcctcttccccatggctatgtgttaacaaagcggcagcaagcatgtgtatccatc
aggtattcagtgaacagtagagactatttttgctgtagtgcggacttttgcataggcaaa
caacagaaggtacttctctag