GENSCAN 1.0	Date run:  7-Nov-116	Time: 14:28:30

Sequence gi568815595f:127823062_128028118 : 205057 bp : 42.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8621   8746  126  0  0   10   80   158 0.069   6.93
 1.02 Intr +  17859  17941   83  1  2   58   86    66 0.040   1.84
 1.03 Intr +  28669  28781  113  0  2   93   67    45 0.112   1.16
 1.04 Intr +  30877  31100  224  1  2   12   76   211 0.163   9.15
 1.05 Intr +  32060  32198  139  0  1   24   92    68 0.616  -0.60
 1.06 Intr +  33767  33864   98  2  2   37  119    64 0.685   3.13
 1.07 Term +  34643  34818  176  0  2   73   38   109 0.535   1.34
 1.08 PlyA +  35142  35147    6                               1.05

 2.03 PlyA -  36129  36124    6                               1.05
 2.02 Term -  43231  43089  143  2  2   15   41   131 0.673  -1.79
 2.01 Init -  46383  46215  169  0  1   56   75   104 0.711   5.65
 2.00 Prom -  47619  47580   40                              -3.25

 3.08 PlyA -  47675  47670    6                               1.05
 3.07 Term -  48409  48284  126  1  0   72   42   132 0.533   4.30
 3.06 Intr -  65582  65486   97  1  1   91  103    71 0.135   7.99
 3.05 Intr -  66720  66662   59  0  2  114   81    17 0.135   0.36
 3.04 Intr -  70182  70045  138  0  0   84   98    85 0.110   8.84
 3.03 Intr -  70521  70436   86  1  2   80   54    90 0.065   3.42
 3.02 Intr -  79544  79490   55  2  1   71   87    33 0.049  -0.87
 3.01 Init -  81075  80974  102  0  0   52   88    65 0.141   3.19
 3.00 Prom -  87605  87566   40                              -5.55

 4.00 Prom +  90080  90119   40                              -3.35
 4.01 Init +  91315  91526  212  0  2   90   44   124 0.985   6.50
 4.02 Term +  92095  92533  439  1  1  126   50   277 0.782  21.46
 4.03 PlyA +  92930  92935    6                               1.05

 5.00 Prom +  96722  96761   40                              -7.25
 5.01 Init + 100001 101070 1070  1  2   72   58   560 0.884  45.25
 5.02 Intr + 104703 104973  271  0  1  134   42   193 0.800  15.92
 5.03 Intr + 107072 107222  151  1  1   55   86   167 0.674  12.01
 5.04 Intr + 135331 135369   39  2  0   80   83    56 0.177   1.58
 5.05 Intr + 140128 140325  198  2  0  107   80   181 0.919  17.60
 5.06 Term + 151299 151453  155  1  2  105   48   118 0.595   6.60
 5.07 PlyA + 151914 151919    6                               1.05

 6.00 Prom + 156299 156338   40                              -6.05
 6.01 Init + 156992 157047   56  1  2   64   75    35 0.142   0.61
 6.02 Intr + 159023 159112   90  2  0  126   67    28 0.125   2.69
 6.03 Intr + 167039 167324  286  2  1   73   67   190 0.607  11.82
 6.04 Intr + 167447 167619  173  1  2   82   52   155 0.608   9.12
 6.05 Intr + 167755 167852   98  1  2   68   34    54 0.360  -3.27
 6.06 Intr + 168041 168601  561  0  0  107   69   200 0.072  11.86
 6.07 Intr + 171256 171382  127  2  1   54   89    44 0.045  -0.08
 6.08 Intr + 176650 176811  162  1  0   34   15   165 0.344   1.97
 6.09 Intr + 178632 178766  135  0  0  105   80   107 0.630  10.36
 6.10 Intr + 178889 178948   60  2  0  104   88    38 0.498   2.33
 6.11 Term + 178998 179148  151  0  1    5   48   135 0.526  -2.40
 6.12 PlyA + 179427 179432    6                               1.05

 7.08 PlyA - 179822 179817    6                              -0.45
 7.07 Term - 180205 180023  183  1  0   57   54   128 0.214   2.86
 7.06 Intr - 183146 182942  205  1  1   65   11   207 0.963   8.98
 7.05 Intr - 183873 183686  188  0  2   62   76    92 0.496   2.97
 7.04 Intr - 184193 183918  276  2  0   28   60   222 0.866  10.19
 7.03 Intr - 185737 185699   39  1  0  120   79     3 0.000   0.10
 7.02 Intr - 199229 199086  144  2  0  101   30    62 0.290   1.26
 7.01 Intr - 199967 199851  117  2  0   87   62    70 0.517   4.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 184929 184744  186  0  0   51   30   161 0.981   5.71
S.002 Term + 189934 190129  196  1  1   53   43   223 0.911  10.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_1|319_aa
XADGFEDLELKKKVRPETEMWVLAGNGPCSCGGECADPGEWAAHTGPEGQHILCGWMSMC
PERPSPWEWKDSVENKTFSCISTFKKEKSKGPLLTQAQDCGWALDEARRGSTAAQSWKLE
RRGSMEMTHLAAPGRPSPELAMEKDEAQPDLPHRIPGKPRTSRHSMSLAVEVTRMVTWRL
QEGRWRQTPHKNAETEKEKIKNQNDRMHLCSFPIAAIKKELHILWLKTTLGTFLANLGRL
GRGSQVDEGLELYDGSMGSATGPRESLVNGLCNLPEDPKSQSFPKPDQPSWYLLSKQHLI
YLSLSVTSLEGNLAVSNKI

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_1|960_bp
ngggcagatggatttgaggatctagagctgaagaagaaggtcagaccggagacagagatg
tgggtgttggccggaaatggcccttgcagctgtgggggagagtgtgctgacccaggagag
tgggcagctcacacaggtccagagggtcagcacattctttgtggttggatgtccatgtgt
cctgaacgtccatctccgtgggagtggaaggacagtgtagaaaataaaacatttagttgc
atatccacatttaaaaaagaaaaaagcaagggtcccttgctcactcaggcccaggactgt
ggatgggccttggatgaagccaggagaggaagcacggcagcacagtcctggaagctggaa
cgcagagggagcatggaaatgacacacctggcagccccaggaagaccaagccctgagctg
gcaatggagaaagatgaagctcagccagacttaccccacagaatccccggaaagcccagg
acttcaaggcactcgatgtctctggcagtagaggtgacaaggatggtgacctggaggctg
caggaaggacgctggagacagacgccccacaagaatgcggagacagagaaagagaagatc
aagaaccagaatgacagaatgcatttgtgttcatttcccattgctgctattaaaaaagaa
ctacacattttgtggcttaaaacaacgttaggaactttcttagcaaacctagggcgtttg
ggtagaggatcccaagtggatgaaggcctagagttatatgatggctccatggggtcagca
actggtccacgagagagccttgttaatggactctgcaaccttccagaggaccctaagtct
cagagctttcccaagcctgaccagccatcctggtacctgctgtctaagcagcacctcata
tacctcagcttatctgtcacctctctggagggcaatttggcagtgtctaacaaaatttaa

>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_2|103_aa
MCDKLAADRLRHRGQLGHCFSGSGTSQGAPEPRQWQSVGSNRTALMDKEERRWSSAGEWV
DSVNNAALGRKKESFANGKSHVSPPGRRRGQKDFLGFFAMWSE

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_2|312_bp
atgtgcgataaattggcagctgacagactgaggcacagaggtcagttaggacattgtttc
agtggttcaggaacaagccaaggggcacctgagcccaggcagtggcagtcagttggaagc
aacaggacagccttgatggacaaagaagaaagacgttggagtagtgcaggagaatgggtg
gacagtgtgaataatgcagctctggggagaaagaaggaaagctttgcgaatggaaaatct
catgtatcaccaccaggtcgtagaagaggccagaaggactttctaggattctttgctatg
tggagcgaatga

>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_3|220_aa
MKYSTAEEQQTETTWLQIPSEEEVVLKRVRLCKEEDVSLRMENGDLQDGTALETKSSSEE
ETTLDRGKQTEERAAPELSKKRGLVDEGLAPPDGGWGPLKKGSAPLQFLVPWKLYLEVPG
FGAICWKGAVTIKRLPTTGVVTLGPGRSVGQLGCLRSSCLLSSLDLARNALMGMAEAKMH
GRLSTAGFPTWHLRPSATGDLRTSASALQYPMDRKRKGNL

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_3|663_bp
atgaaatattctacagctgaagaacaacagacagagacaacatggttgcagatacccagc
gaggaggaagtggtgttgaagagggtcagattatgtaaagaggaagatgtgagtctcagg
atggaaaatggtgacctccaggatggcacagctcttgagactaaaagctcctctgaagaa
gagacaacattagacagggggaaacaaacagaggagcgagcagcccctgaattgagtaaa
aagcggggcctggtagacgagggccttgcccctccagatggaggctggggtcctttaaag
aagggttcggcccctttacagtttctggttccctggaaactctatctagaagtacctggg
tttggagccatctgttggaagggtgctgtaaccataaaaaggttaccaaccactggggta
gtcactttagggccaggaaggtccgtgggtcagctggggtgtctccgctcctcgtgtctc
ttatcctccttggacctagccaggaatgctctcatgggaatggcagaggcaaagatgcat
ggccgcctcagcacagccggattcccgacatggcacctgaggccttcagccacgggtgac
ctgcgaacctctgcgtctgctcttcagtatcccatggatcggaagaggaaaggaaacttg
tga

>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_4|216_aa
METTSPLKGTNCRHNACEKDSALFSGFEAGGRSQEQKNEDSFQKLQKGRDRFTPGSPRNK
HSPADTLISIQPSVALARGPAREHSAQAHSVPRGTLSRVRDARGETLCSDTGAVVAVWNQ
RGNRCAGAQWLEGSGGVVSGHFQAEGSTCPLGGAASALPPPPQGAGPLFISPSQHRPILG
SGLSQARWPPCHTVASKPGRGPASGDAPRTRQHLRK

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_4|651_bp
atggagaccacaagcccactgaaaggaaccaactgcagacacaatgcatgtgagaaagac
tcagccctattttctggctttgaagctggaggaaggagccaggagcaaaagaatgaagac
agtttccagaagctgcaaaagggcagggacagattcactccaggaagccccagaaacaaa
cacagtcctgctgacaccttgatttcaatccagccttcagtcgctctggcacgcgggcca
gcgcgggaacactctgcgcaggcgcacagcgttccgcgggggacgctcagtagggtacgg
gacgcgcgcggggagaccctgtgcagcgacaccggggctgtagtcgccgtctggaaccag
cgcgggaataggtgcgcaggcgcacagtggctggagggcagcggcggcgtggtctcgggc
cacttccaagcagagggcagcacctgtcccctcggaggcgctgccagcgccctccctcct
cctccgcagggcgcgggacctctatttatatcgcccagccagcacaggcccatattgggc
agtggcctcagtcaggcccgctggccgccctgccacacggtagcgtccaagccaggtcgt
ggcccagcgagtggggacgcgccccgaaccaggcagcaccttcgtaagtag

>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_5|627_aa
MECKIEGKEKYQHSLNLLNKIQNMKELAEMIDVVLTAEGEKFPCHRLVLAAFSPYFKAMF
TCGLLECNQREVILYDITAESVSVLLNYMYNAALEINNANVQTVAMAAYFMQMEEVFSVC
QKYMMDHMDASNCLGIYYFAKQIGAEDLSDRSKKYLYQHFAEVSLHEEILEIEVHQFLTL
IKSDDLNISREESILDLVLRWVNHNKELRTVHLVELLKQVRLELVNPSFLRQALRRNTML
LCDADCVDIIQNAFKAIKTPQQHSLNLRYGMETTSLLLCIGNNSSGIRSRHRSYGDASFC
YDPVSRKTYFISSPKYGEGLGTVCTGVVMENNTIIVAGEASASKLSRQKNKNVEIYRYHD
RGNQFWEKLCTAEFRELYALGSIHNDLYVIGGQMKIKNQYLITNCVDKYSVERDNWKRVS
PLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWSVRAPMKY
SKYRFSTAVVNSEIYVLGFRPAGTPAGQTGGGIGCVGQDKGQVRKCLDVVEIYNPDGDFW
REGPPMPSPLLSLRTNSTNAGAVDGKLYVCGGFHGAGASMIRKEGSTAISFILYRHSSLR
ALLSLDARAADCEQVSVWAIMKGMSFN

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_5|1884_bp
atggagtgcaagattgagggaaaagaaaaataccaacatagcttgaatttactgaataaa
attcagaacatgaaagaattagcagaaatgattgatgtggtactcacagcagaaggagag
aaatttccttgccacagactggtcctggctgcatttagcccttatttcaaagctatgttc
acctgtggactacttgaatgtaatcaaagggaagtcatactttatgacatcacagcagaa
agtgtgtcggtgttattaaattacatgtacaatgcagctttggagatcaataatgccaat
gtacagactgtagctatggctgcctattttatgcagatggaagaagtcttcagtgtgtgt
caaaaatatatgatggaccacatggatgcctccaactgtttaggtatctattattttgca
aagcagattggagctgaagatttatctgatcgatcaaagaaatatttatatcagcacttt
gccgaggtgagcttacatgaagaaatactagaaatcgaagtgcaccaatttttgacactt
attaaatcagatgatcttaacatatccagagaagagagcattctggacttagttctgaga
tgggtaaatcataacaaagaattgcgtacagtgcatcttgttgagcttttgaagcaagtc
agattggaacttgtaaatccttcttttttaagacaagccctaagaaggaacacaatgctt
ctgtgtgatgcagattgtgttgacataattcaaaatgcattcaaagccatcaagacaccc
caacagcactctctaaatctgcgctatggtatggagactaccagtcttctgctttgcatt
ggcaacaattcttcaggaatcagatcaagacataggagctatggggatgccagtttttgt
tatgatcctgtatcacggaaaacctatttcatctcatctcccaagtacggagagggttta
ggaactgtgtgtactggtgttgtcatggaaaataatactataattgtggctggagaagca
agtgcctctaaactctctagacaaaagaacaagaatgttgaaatttataggtatcatgat
agaggaaaccagttttgggaaaagttatgcacagctgaatttcgagaactctatgctctg
ggcagtattcataatgacctttatgttataggaggacagatgaaaattaaaaaccagtat
cttattacaaactgtgttgataagtactctgtagaacgggacaattggaaaagggtgtct
ccccttccactgcaattggcatgtcatgctgtagtgacagtgaataataaactttatgta
attggaggctggacccctcagatggatcttcctgatgaagaacctgatcgattaagcaac
aaactgttgcagtatgaccccagccaagatcaatggagtgtgcgggcacccatgaagtac
tctaagtaccgattcagtacagctgtagtcaacagtgagatttatgttttgggctttaga
cctgctgggacccctgcaggacagactggtggtggcattggctgtgtaggtcaagacaag
ggccaggttcgaaaatgccttgacgtggtggagatctacaacccagatggggacttttgg
cgagagggccctcccatgccaagtcccctcctctcactccgcaccaattccaccaatgca
ggggcagtggatgggaaactctatgtctgcgggggattccatggagcaggggcctccatg
atacggaaagagggctccacagccatcagtttcatcctgtaccgtcactccagcctgagg
gcattgctctccctagatgccagagcagcagattgtgaacaggtttctgtatgggccatc
atgaagggaatgtccttcaactga

>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_6|632_aa
MEKFELHQKSSKKRYSEEMLASIDSIKGSFPLWLLDGSVSRRKEQEIIREEPREGVDSWH
KEENRRRPASLGSHTGPAALRHSGAHDPPPAVKQQRNSWSETATKASSSVARRGWRQRED
PQLACSLASALFQPRACRAPSILKLCRACAGADQDSRNKTGGHPTMEDGLGEDSHGDDLK
APVTHSAFSESFLAPAPHWAGRTHDRKFRGLKQIHVLAFPYFRSPKWISVSQNQGPWSYT
GPVWKTQDALSDQQPQPPSCVMPPTWEVLGSADLLGEPLFCLPQPPNPHKVRSSQMCMCG
VYRSSHTRQGWKPQRGGKEEHIHRCLVLRTQCPGTSMTSRGVLRGSGRFFSPWRSWRKHA
GLGLAAALFQPQVKLTPWKENSKARTQATDHITVPLNEARPEACCTSGTPRFQANTSHSL
VVSSTGTPWLSNMVGLTATPWLFNLVSSTGSLWPSNMADTQVQDVGGRSPSTARTGTGES
DELEFARQTTEGETQNGQTWSCPFSTGVRLGLLLNAKLESHWLKATPSQTAQVTEQAGNV
KIWPFQLSTEHADGRPCSGVPNREASLRQLAKAHPNEMAENARQGDNETASARKSRGSTN
LYPATKEDKIETFPNKPKLEILPAADLQYGKC

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_6|1899_bp
atggagaaatttgaactgcaccagaaatcttctaaaaagaggtactcagaagaaatgctg
gcctctatagacagcattaaaggttcctttcctctctggcttctggatggttcagttagc
aggaggaaagagcaggaaattatcagagaggagcccagggagggagtggacagctggcac
aaagaggagaaccgacgcaggccggcgtctcttggaagccacactggccctgcagcactg
agacactcaggagcccatgatcctccaccagccgtgaagcagcagagaaactcatggtcc
gaaaccgcaaccaaagcctccagttccgtggccagacgtgggtggaggcaaagggaagac
ccacagctggcctgcagcctcgcgtctgccctcttccagccgcgggcctgcagggcgccc
agcatcctcaagctctgcagagcatgtgctggtgctgatcaggactcccggaacaagaca
ggaggccaccccaccatggaggatggtctgggggaggacagtcatggcgatgacctcaag
gcaccggtcacacactcagcattttccgagtcctttttggcaccagcaccgcactgggca
gggagaacacatgaccgcaaatttagaggcttaaaacagattcacgtacttgcatttccg
tacttcagaagcccaaaatggatctcagtgagtcaaaatcaaggaccctggagttacact
gggcccgtctggaaaacccaggatgctctctctgaccagcagccccagcccccttcttgt
gtgatgccacccacttgggaggttctgggttctgcggaccttttaggggaaccattattt
tgcctaccacaacccccaaatccccataaagtacggtcatcacagatgtgcatgtgcggc
gtttataggagttcacatacacgccaaggttggaaaccccagcgaggagggaaagaggag
cacatacacagatgcctggtccttagaacacagtgccctgggacctccatgaccagcagg
ggcgtgctgagaggttctggaagattcttttctccgtggaggagctggaggaagcacgca
ggcctggggctggcggcagccctcttccagccgcaggtgaagctcacaccgtggaaggaa
aacagcaaagcaagaactcaggccactgaccacatcactgtgcccctgaatgaagccagg
cccgaagcctgctgtacctctggcactcccaggtttcaagccaacacatcacattccctt
gtggtgagctcaactggaaccccctggctttccaacatggtgggcttaactgctacccca
tggctctttaacctggtgagctcaactgggtccctgtggccctccaatatggcagataca
caggtccaagatgtaggtggtagaagcccaagcacagcaaggactggcaccggggaaagt
gatgagctggagtttgcaagacagaccacagaaggggagacacagaatgggcagacatgg
agctgcccattcagcacaggggtccgcctgggtctgttgctgaacgctaagctagagagc
cactggctaaaggccacaccttcccagacagcccaggtgactgagcaggcagggaatgtg
aagatctggccatttcagctcagcacagaacatgctgatggaaggccttgctctggagtc
cccaacagggaagccagcctgagacaactagcaaaggcacatcctaatgaaatggctgag
aatgcgagacaaggagacaatgaaacagcatctgcaagaaaaagccggggatctacaaat
ctatatcctgcaaccaaagaagacaaaatagagacttttccaaacaaaccaaagctagag
attttgccagcggcagacctgcaatacgggaaatgttga

>gi568815595f:127823062_128028118|GENSCAN_predicted_peptide_7|383_aa
CWDYRHEHLAPVSDLTCKDFKAAIVNMVKELKDTMKQRKVAGSHLTYSCCLQSWTEAGTW
HGGARQVETPDSVAWLGVALSRQPGVERRRLRHRQNQGHTEQPEIATGHSGRQSLCGQGV
DPATEKNTLGGGRGPAALNPERMGGEGPREGGKTWERCRNWYWDVWGKKVLEEEQLSRTW
RRRTNQRNPESGGPRPLGAGALGPAAPSKIPSGCSAGNQGRWEASAMVQATNKGGRGLAL
NGLCGCSTWRPLQGRVKPGAKGPGRRSLWSQHLALAAGSNLGGLLLGGSPGGAPPLSAPG
NHSDSVGPLPLNPIPTARGQKAQHMVYFDDGSMCAENGHSAIVKREMVKLADRVRVFCVL
IGRGVWESCMRIVDLSVFPFNSA

>gi568815595f:127823062_128028118|GENSCAN_predicted_CDS_7|1152_bp
tgctgggattacaggcatgagcacctggccccagtgtcagatttaacttgcaaagatttc
aaagcagccattgtaaatatggtcaaagaactaaaggacaccatgaagcaaaggaaggtg
gctggctcccatctcacctacagctgctgcctgcagagctggactgaggctggcacctgg
catgggggagccaggcaagtcgaaacaccggacagtgtggcctggttgggagtggctctg
agcagacagcctggggtggagaggaggagactgaggcacaggcagaaccaaggtcacaca
gaacagcctgaaatagctaccgggcactctggaaggcagtcactgtgtgggcagggggtg
gaccctgctacggagaagaatacactagggggagggagaggacctgcagcgttgaatcct
gagcgcatgggtggggaagggccccgagaagggggaaagacttgggagaggtgcaggaac
tggtattgggatgtctgggggaagaaggttctagaggaagaacagctaagccgcacatgg
cggcggaggaccaaccagaggaatccggagagtgggggacctcggcctctgggagccgga
gccctgggacctgctgcaccgtccaagattccctctggctgcagtgcgggaaaccaggga
aggtgggaggcctctgccatggtccaggcaacaaacaaaggtggccggggcctggctctg
aacgggctttgcggatgctccacctggcgtcctcttcaaggaagggtaaagcccggtgca
aaaggccccggtcgccggtccctctggtcccagcatttggcccttgcagcaggcagcaat
ttgggtgggctgcttcttggagggtcgccagggggtgcccctcccctcagtgcgcctggg
aatcacagtgacagcgttggtcctctgcctctcaaccccatccctactgccagagggcag
aaagcccagcatatggtttatttcgatgatggctctatgtgcgctgagaatggacattct
gccattgttaagcgtgagatggttaaattggctgaccgtgttcgagtcttctgtgtcctt
attggaagaggagtgtgggaatcatgcatgagaattgtggatttgtctgtttttcctttc
aattctgcgtga