GENSCAN 1.0	Date run: 11-Nov-116	Time: 16:58:03

Sequence gi568815594r:22627378_22827950 : 200573 bp : 38.13% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    740    735    6                               1.05
 1.03 Term -   3382   3255  128  2  2   28   49   108 0.215  -1.64
 1.02 Intr -   7742   7656   87  0  0   47   80    69 0.131   1.02
 1.01 Init -  14388  14091  298  0  1   52  123   130 0.867  10.33
 1.00 Prom -  20273  20234   40                              -4.85

 2.07 PlyA -  20340  20335    6                               1.05
 2.06 Term -  34460  34330  131  0  2   95   54    73 0.154   1.96
 2.05 Intr -  51243  51113  131  2  2   87    9   204 0.419  11.82
 2.04 Intr -  52168  52031  138  0  0   86   55    88 0.842   3.96
 2.03 Intr -  57228  57028  201  2  0   55   16   177 0.678   4.68
 2.02 Intr -  60696  60549  148  1  1   72   25    89 0.307  -0.63
 2.01 Init -  62662  62626   37  1  1   72  110    27 0.719   3.66
 2.00 Prom -  66005  65966   40                              -3.25

 3.05 PlyA -  66426  66421    6                               1.05
 3.04 Term -  70455  70361   95  1  2  117   36   120 0.908   6.71
 3.03 Intr -  81841  81715  127  1  1   65   77   277 0.067  23.63
 3.02 Intr -  85385  85328   58  1  1   87   45    77 0.045   1.27
 3.01 Init - 100573 100014  560  1  2   69   89   419 0.350  34.61
 3.00 Prom - 104062 104023   40                              -6.35

 4.03 PlyA - 104528 104523    6                               1.05
 4.02 Term - 106315 106151  165  1  0  109   38    89 0.886   2.93
 4.01 Init - 107353 107288   66  1  0  104   70    59 0.750   6.82
 4.00 Prom - 107841 107802   40                              -8.55

 5.00 Prom + 111346 111385   40                              -6.65
 5.01 Init + 116099 116108   10  1  1   91   58    24 0.324   0.37
 5.02 Intr + 119919 120715  797  1  2  102   94   615 0.959  53.75
 5.03 Intr + 121460 121583  124  1  1   96   76    58 0.990   4.64
 5.04 Term + 124805 124971  167  0  2   30   38   179 0.583   4.20
 5.05 PlyA + 125301 125306    6                               1.05

 6.07 PlyA - 125549 125544    6                              -0.45
 6.06 Term - 125914 125783  132  1  0  117   34    44 0.140  -0.99
 6.05 Intr - 129645 129536  110  1  2  -12   85   133 0.129   2.08
 6.04 Intr - 132258 132181   78  1  0   69  100    31 0.149   1.00
 6.03 Intr - 139398 139326   73  0  1  102   20    64 0.218  -0.94
 6.02 Intr - 140162 140082   81  2  0   30   90    97 0.377   3.02
 6.01 Init - 155130 154984  147  0  0   73   37   137 0.723   7.24
 6.00 Prom - 161979 161940   40                              -3.75

 7.02 PlyA - 162353 162348    6                               1.05
 7.01 Sngl - 183930 183736  195  0  0   63   32   173 0.602   4.11
 7.00 Prom - 187162 187123   40                              -4.55

 8.02 PlyA - 187225 187220    6                               1.05
 8.01 Term - 191540 191340  201  2  0   82   44   165 0.534   7.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_1|170_aa
MLSLEKSKSRGASANKTQLVESLKKTTSGSTNTLKQHQEQWHDVCRQREPEPTRRLLSAP
RSMKKKTIQKCIMILRGSGKYMRRDTKPEKTFRWIKQIFAIGRSMGPGTLEQGAALIGEA
RSAREPTAGHSDCCVEDLLGSGKGRMGDWNTEDRLEEILPLIERADKNFN

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_1|513_bp
atgctgagtttggagaaatccaagagcagaggagcttcagccaataaaacccagttggta
gagagtcttaagaagacaaccagtggcagcaccaataccctgaagcagcatcaggaacaa
tggcatgatgtatgcaggcagagagaacctgagcctacaaggaggcttttgtcagctcca
aggagcatgaaaaaaaaaaccatccagaagtgtatcatgatcctgagaggatcagggaag
tatatgagaagagacaccaaaccagaaaagacctttcgttggataaagcagatcttcgcc
attgggcggtccatgggaccaggcactttggagcagggggctgcgctcatcggtgaggcg
cggtccgcgcgggagcccaccgcgggtcattctgactgctgtgtggaggatttattggga
agtgggaaggggaggatgggagactggaatacagaagaccggttagaagaaatattgccc
ctgatcgagagagctgataagaacttcaactag

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_2|261_aa
MALRHEFAAIISEESLFSDTMSLEKKGSGREREEGAGAKGTSTCSGWCNGLFIMISCIYQ
ERSRVEKRNGEAEGRIYRKLWDVALLCCVQEVINGERKPLRALTEVKSGFRLREQTRILL
RGLHQKNGSGQRKGTPSFRIIKYSTKKALFMEFGEESSVRVMESFEMEMILGVIYAGITD
VSHCASPLHSKKEEEKKRKKKKKKEEEEKEEEKEEEKKKVRRRMLSLTLKTDYPLKETSI
GENINWLLESTAMRIKESGMK

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_2|786_bp
atggctctaaggcatgaatttgcagccatcatctcagaggagagcctcttcagtgatact
atgtcattggagaagaaaggaagtggaagggaacgtgaagaaggggcaggtgcaaagggt
acatctacttgcagtggttggtgcaatggattattcatcatgatttcctgcatttaccaa
gaaagatccagagtagagaaacgaaatggagaggcagagggaagaatctaccgaaaacta
tgggatgttgccctgctctgttgtgtccaggaggtcattaatggggaaaggaaacctctg
agagcactgactgaagtgaaatcgggatttaggctcagggagcagacaaggattctcctc
agaggacttcatcagaaaaatggaagtggtcagaggaaaggaacaccttcattcagaatc
ataaaatatagcactaaaaaggctctgttcatggaatttggagaggaatcctcagttaga
gtcatggagtcttttgagatggaaatgatattaggggtcatttatgctgggattacagat
gtgagccattgtgccagcccactccattccaagaaggaggaggagaagaagaggaagaag
aagaagaagaaggaggaggaggagaaagaggaggagaaggaggaggagaaaaaaaaagtt
agaagaagaatgttgagcttaacattgaagacagattaccctttaaaagaaacatctatc
ggagaaaacattaattggttgctggaaagcacggctatgagaataaaagaatctggaatg
aaatga

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_3|279_aa
MQTIKCVVVGDGAVSKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR
DDPSTIEKPAKNKQKPITPETAEKLARDLKAVKYVECSALTKKGLKNVFDEAILAALEPP
EPKKSRRLAGGLAAMPRQPSDLSDLWRIQTNMPPDGNNDEDDEKDDDDDDDDDDNGGGNS
GDKNYDGKGGPDKEHICLDIPLLEEYQEQPRDQVSDCDV

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_3|840_bp
atgcagacaattaagtgtgttgttgtgggcgatggtgctgttagtaaaacatgtctcctg
atatcctacacaacaaacaaatttccatcggaatatgtaccgactgtttttgacaactat
gcagtcacagttatgattggtggagaaccatatactcttggactttttgatactgcaggg
caagaggattatgacagattacgaccgctgagttatccacaaacagatgtatttctagtc
tgtttttcagtggtctctccatcttcatttgaaaatgtgaaagaaaagtgggtgcctgag
ataactcaccactgtccaaagactccttttttgcttgttgggactcaaattgatctcaga
gatgacccctctactattgagaaacctgccaagaacaaacagaagcctatcactccagag
actgctgaaaagctggcccgtgacctgaaggctgtcaagtatgtggagtgttctgcactt
acaaagaaaggcctaaagaatgtatttgacgaagcaatattggctgccctggagcctcca
gaaccgaaaaagagccgcagactagctggcggcctggctgcaatgcctcgccagcccagt
gatctctcagacctgtggaggatccaaactaacatgccacctgatggcaacaatgatgaa
gacgatgagaaggatgatgatgatgatgatgatgatgatgataacggtggtggtaatagt
ggtgataaaaattatgatggtaaaggtggtccagacaaggagcatatctgtctggatatt
cctcttcttgaagagtaccaagagcagccaagagatcaagtctcagactgcgatgtttaa

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_4|76_aa
MRIQKRLLKGALTKAKVVIDIKVEGKEDKRCTRTSLFTTDTSYFFVESGNSFQTLVTVSS
IFGATHNTTATDMTHF

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_4|231_bp
atgaggatacagaagaggctgctaaaaggagctctgacaaaagcaaaagtggtcattgat
atcaaggtagaaggaaaagaagacaaaagatgtaccagaacttcactttttaccactgac
acgagctacttctttgttgaatcaggtaacagttttcaaacactggtaactgtctcctca
atttttggtgctactcacaacaccacagccacagacatgacacacttttaa

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_5|365_aa
MNAGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAIIESFDKYAQFCFST
FGDRVKQWITINEANVLSVMSYDLGMFPPGIPHFGTGGYQAAHNLIKAHARSWHSYDSLF
RKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQI
ASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQDAEI
EFFPDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEY
FRQTFQELFKVLHAVFEEEPTGSVTLSKAQTPYILVLIKRAELNLLINFLRLLRGNADDL
GCQEL

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_5|1098_bp
atgaacgctggaattgattattacaacaagatcatcgatgatttgttaaaaaatggggtt
actcccattgtgaccctctaccactttgatttgcctcagactttagaagaccaaggaggt
tggttgtcagaggcaatcattgaatcctttgacaaatatgctcagttttgcttcagtacc
tttggggatcgtgtcaagcagtggatcaccataaatgaagctaatgttctttctgtgatg
tcatatgacttaggtatgtttcctccgggtatccctcactttgggactggaggttatcag
gcagctcataatttgattaaggctcatgccagatcctggcacagctatgattccttattt
cgaaaaaagcagaaaggtatggtgtctctatcactttttgcggtctggttggaaccagca
gatcccaactcagtgtctgaccaggaagctgctaaaagagccatcactttccatctggat
ttatttgctaaacccatattcatcgatggtgattatcctgaagttgtcaagtctcagatt
gcctccatgagtcaaaagcaaggctatccatcatcgaggcttccagaattcactgaagaa
gagaagaaaatgatcaaaggcactgctgatttttttgctgtgcaatattatacaactcgc
ttaatcaagtaccaggagaacaagaaaggagaactaggtattctccaggatgcggaaatt
gaattttttccagatccatcttggaaaaatgtggattggatctacgtggtaccatgggga
gtatgtaaactactgaaatatattaaggatacatataataaccctgtaatttacatcact
gagaatgggtttccccagagtgacccagcgcctcttgatgacactcaacgctgggagtat
ttcagacaaacatttcaggaactgttcaaagtgcttcatgctgtctttgaagaagagccg
acaggttctgtgaccttgagcaaagctcagacgccctatatcctagttctcatcaaaaga
gcagagctgaacttgctaatcaattttctgagactcctccgaggtaatgctgatgatctt
ggttgccaagaactttaa

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_6|206_aa
MHKNSGNAMERHREKAATHSLSSVQAKEKAFTRHQSCQHLDLELPTSSTNLGLEDDHIQT
TAVPTTVPIPDDSKCTAKPSSEDQWNLDEHELISVYWDLQLTLLNLSLKCPSDSMNSKGK
LSQAKKDREDNGFQLKRTRKDSLMCDQAASHMGNSMKPVLVKQGNNEWRCCFLLSAIHTR
KSQRTNVITHIQKFLKKEEKHRNMGK

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_6|621_bp
atgcacaagaacagcggaaatgccatggaaagacacagggagaaggcagccactcacagc
ctttcctctgtgcaagccaaggagaaagccttcaccagacaccaatcctgccagcacctt
gatcttgaacttccaacctccagcactaatttaggactggaagatgatcacatccagaca
acagctgtgcctacaacagtccctatccccgacgacagcaagtgcacggcaaagccatct
agtgaggaccaatggaacttggatgaacatgaacttatttcagtgtattgggacttacag
ctaactttgttaaacttgagtctgaagtgcccttctgactctatgaattccaagggaaaa
ctttctcaagcaaagaaagacagagaagataatggtttccagttaaaacgcacaaggaaa
gattctctgatgtgtgatcaagctgcttctcacatgggcaactccatgaaacctgttctt
gtgaagcagggaaataatgaatggaggtgctgctttctcctcagtgcaattcacactaga
aaaagccagaggaccaatgttataacacacatccagaagttcctcaaaaaggaagagaaa
cacagaaatatggggaaatag

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_7|64_aa
MRSSWKTVCPKSNGKCPQKIRERAKTRRKEDNVETEAEIGVIHLQAKEHQGLPAATRSQY
RSME

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_7|195_bp
atgagatcatcctggaagacagtgtgccctaaatccaatggcaagtgtcctcagaagata
agagaaagggcaaagacacgcaggaaagaagacaacgtggagacagaggcagagattgga
gtgatacatctgcaagccaaggaacaccaagggttgccagcagccaccagaagccagtat
agaagcatggagtaa

>gi568815594r:22627378_22827950|GENSCAN_predicted_peptide_8|66_aa
MCFKAIVSDDLGLFLGRCVRDSGSSWVFKINVEETKPAAVSLVPLKVIQKRPCTIYLKID
FIKLDS

>gi568815594r:22627378_22827950|GENSCAN_predicted_CDS_8|201_bp
atgtgcttcaaggccattgtttcggatgatcttggcttattccttggccgatgtgtaagg
gactcggggtctagctgggtcttcaaaatcaacgtggaagagaccaaaccggctgctgta
tccctggttccactcaaagttatccagaagagaccatgcacaatatacttgaagattgac
tttatcaagttggatagctga