GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:23:02

Sequence gi568815594r:176115603_176369108 : 253506 bp : 37.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    194    377  184  1  1   55   70   136 0.459   6.94
 1.02 Intr +   9502   9753  252  2  0   65   99    90 0.831   4.28
 1.03 Intr +  15952  16136  185  2  2   56   76    89 0.582   3.09
 1.04 Intr +  19506  19674  169  2  1   86  110    82 0.963   8.80
 1.05 Intr +  21918  22009   92  1  2   45   94    54 0.406   0.49
 1.06 Intr +  30925  31096  172  0  1   48   98    47 0.100   0.29
 1.07 Intr +  34441  34571  131  2  2   83   84    31 0.887   1.69
 1.08 Intr +  34866  34991  126  2  0   51   79    62 0.694   1.56
 1.09 Intr +  36210  36365  156  2  0   41   80   204 0.985  14.19
 1.10 Intr +  40477  40541   65  0  2   74   94    35 0.801  -0.70
 1.11 Intr +  44392  44524  133  1  1   66   98   103 0.769   8.83
 1.12 Intr +  45309  45400   92  2  2   35   61    81 0.354  -2.03
 1.13 Intr +  47512  47691  180  1  0  -25   95   155 0.079   2.96
 1.14 Intr +  53070  53181  112  0  1   92   91    80 0.998   8.16
 1.15 Intr +  56773  56914  142  0  1   48  115   110 0.978   8.71
 1.16 Intr +  57665  57767  103  0  1   74   61    36 0.733  -2.19
 1.17 Intr +  59015  59116  102  2  0   54   93    51 0.455   0.57
 1.18 Intr +  61869  62052  184  0  1    8  103   106 0.673   2.97
 1.19 Term +  63858  63977  120  2  0   71   44    74 0.752  -1.21
 1.20 PlyA +  64494  64499    6                               1.05

 2.17 PlyA -  64807  64802    6                               1.05
 2.16 Term -  74495  74340  156  2  0   68   42   108 0.357   1.15
 2.15 Intr -  75237  75083  155  1  2   25   95    70 0.530   0.27
 2.14 Intr -  77245  77025  221  0  2   80  111   120 0.985  10.52
 2.13 Intr -  79976  79743  234  1  0   76   49   155 0.161   6.28
 2.12 Intr -  84136  84042   95  1  2   14   99    78 0.018  -0.66
 2.11 Intr -  91981  91837  145  0  1   44   98    76 0.078   3.56
 2.10 Intr -  92501  92384  118  0  1   39   55    66 0.034  -3.00
 2.09 Intr - 101407 101216  192  2  0   51  116   190 0.995  16.64
 2.08 Intr - 105687 105598   90  1  0  102   36    59 0.631   1.15
 2.07 Intr - 105998 105848  151  2  1   40   88    96 0.957   3.61
 2.06 Intr - 106818 106711  108  0  0   42  101    53 0.715   1.56
 2.05 Intr - 109739 109660   80  0  2  106   90    30 0.913   3.35
 2.04 Intr - 121869 121692  178  0  1   50   96   124 0.281   7.97
 2.03 Intr - 134004 133874  131  1  2   64   90    80 0.029   5.29
 2.02 Intr - 153595 153311  285  2  0   96   95   342 0.987  32.09
 2.01 Init - 158704 158611   94  1  1   84   81    25 0.375   1.99
 2.00 Prom - 164287 164248   40                              -4.65

 3.08 PlyA - 164797 164792    6                               1.05
 3.07 Term - 179944 179516  429  1  0   75   36   216 0.221   9.42
 3.06 Intr - 184480 184251  230  2  2   66  119    31 0.465   0.67
 3.05 Intr - 204615 204383  233  2  2   58   62   304 0.615  21.29
 3.04 Intr - 205082 204908  175  0  1   63   53   142 0.741   6.28
 3.03 Intr - 205652 205561   92  1  2   82   81     6 0.150  -1.98
 3.02 Intr - 217526 217395  132  1  0   83  103    16 0.221   1.44
 3.01 Init - 219726 219635   92  0  2   76   87    24 0.261   1.11
 3.00 Prom - 222671 222632   40                              -3.25

 4.00 Prom + 228488 228527   40                              -6.35
 4.01 Sngl + 228796 229428  633  0  0   72   47   536 0.991  43.83
 4.02 PlyA + 230509 230514    6                               1.05

 5.00 Prom + 235008 235047   40                              -6.05
 5.01 Init + 240773 240789   17  1  2   41   99    33 0.021  -1.14
 5.02 Intr + 252096 252254  159  0  0  104   91    65 0.077   6.58
 5.03 Term + 253221 253380  160  0  1   69   38   157 0.039   5.23
 5.04 PlyA + 253397 253402    6                              -1.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  79960  79743  218  1  2   90   49   121 0.819   6.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:176115603_176369108|GENSCAN_predicted_peptide_1|899_aa
LDHRYNEFKLHAIMSEHKKTITAISWCPHNPDLFASGSTDNLVIIWNVAEQKVIAKLDST
KGNKNQKHVLRPESLEGTDEEDPVTALEWDPLSTDYLLVVNLHYGIRLVDSESLSCITTF
NLPSAAASVQCLAWVPSAPGMFITGVSVQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPG
HAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDDPNLLATASFDGTIKVWDI
NTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNGAFIWNVQKGKIIQRFNENSQMLR
CSLESLRHSFAVGPIKAFLGFDQKTCIGTSKPNYLTCHERKDTCSSGPYNNNYAIEPGTP
PLLCGKVSRDIRQEIEKLTANSQVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQ
NYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPAKEERLKEAAEIHLRLGQIQRY
CELMVELGEWDKALSIAPGVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHF
FMSRGQLKEALLVAQAACEGNMQPLHVSVPKGASYSDDIYKEDFNDFYATEEIIFLLSKL
AMAYLIRGNELELAVCVGTVLGESAAPATHYALELLARKCMMISVWNLAADLLLMIPDNE
LHLIKLCAFYPGCTEEINDLHDKCKLPTVEECMQLAETARADDNIFETVKYYLLSQEPEK
ALPIGISFVKEYISSSDWTLDTIYPVLDLLSYIRTEKLLLHTCTEARNELLILCGYIGAL
LAIRRQYQSIVPALYEYTRSLEDSPYTPPSDSQRMIYATLLKRLKEESLKGIIGPDYVTG
SNLPSHSDIHISCLTGLKIQGPVFFLEDGKSAISLNDALMWAKVNPFSPLGTGIRLNPF

>gi568815594r:176115603_176369108|GENSCAN_predicted_CDS_1|2700_bp
ttggatcaccgttataatgaattcaaacttcacgcaattatgtctgaacataaaaaaaca
atcacagcaatttcttggtgtccacataatcctgatctgtttgcaagtggcagtactgat
aatttagtgatcatttggaatgttgcagaacaaaaagtcattgctaaactcgacagtaca
aaaggtaataaaaatcagaaacatgttttgagaccagaatctcttgaagggacagatgaa
gaggatccagttacggccttggaatgggacccactatctactgattatcttctagtggtt
aatttgcattatggaattcgcctggtagattctgaatcactttcttgcataacaacattt
aatcttcccagtgcagcagcttctgtacagtgcttagcctgggttcccagtgctcctggg
atgtttataactggagtttcagtccaatctccaaccaaaaatcattatacatcctcaaca
agcgaagcagttccacccccaactttaacacagaatcaagcattttctcttcctcctggt
catgcagtgtgttgtttcttggatggtggagttggactttatgatatgggagctaagaag
tgggattttcttagagacttgggacatgtggaaactatctttgactgcaaattcaaacct
gacgatcctaatcttttagcaacagcttcatttgatggcactataaaagtctgggatata
aacacattaacagcagtgtacacatccccgggtaatgaaggtgttatttattccctttct
tgggctccaggtggtttaaattgtattgctgggggaacttcccgaaatggtgcttttatt
tggaatgttcaaaagggcaaaattatacaacgatttaatgagaactcacagatgctgcgc
tgcagcctggagagcctcagacactcatttgcagtggggcctataaaagcctttcttggg
tttgaccaaaaaacatgcattgggacttcaaagcctaactacctaacatgtcatgaaagg
aaagacacctgttctagtggcccctacaataacaattatgctatagaaccaggcactcct
cctctactgtgtggtaaagtgtcaagagatattagacaggaaatagaaaaactaactgct
aattctcaagtgaaaaaactaagatggttctcagaatgtttatctcctccaggtggcagt
gacaatttatggaacttggttgctgtgataaaaggacaggatgatagcttacttcctcag
aactactgcaaaggaataatgcacttgaaacatctgattaaatttagaacatctgaagct
caagaactaacaacagtcaagatgtctaaatttggtggtggtattggtgtacctgctaaa
gaggaaagactgaaggaagctgctgaaatccacttgagattaggacaaattcagagatac
tgtgaacttatggttgaacttggagagtgggacaaagccctgtcaattgcaccaggagtc
tctgtgaaatactggaagaagttaatgcagaggagagctgaccaattaatccaggaagat
aaggatgatgtcattccatactgcatagccattggtgatgtgaaaaagctagtccatttt
ttcatgtcaagaggtcagcttaaagaagctctgcttgttgcacaggctgcttgtgaagga
aatatgcagcccttacatgtttccgtgcctaaaggagcttcatattctgatgatatctac
aaggaagactttaatgacttctatgcaactgaagaaattattttcttattgagcaagctt
gctatggcatacctgattcgcggaaatgaactggagttggcagtctgtgtgggcacagta
ctaggagagtctgcagcaccagcaacccactatgccttagaattactggcgagaaagtgc
atgatgatttcagtatggaatttggcagctgatcttcttctgatgattcctgataatgaa
ctacatttaataaaactctgtgctttctacccaggatgtactgaagagataaatgacctt
catgataagtgtaagctacccacagtggaagaatgtatgcagttagctgagacagcccgt
gcagatgacaatatatttgaaactgtaaaatattacttgttaagtcaagaacctgaaaaa
gcccttcctattggtattagctttgttaaagaatacatcagtagctcagactggactttg
gataccatataccctgttcttgacctactgagctatattcgtactgaaaaattactcttg
catacgtgtactgaagctcgaaatgagttgctgatattatgtggttacattggtgcatta
ctggctatcagaagacagtaccaaagcattgttccagcactttatgagtacacaagatca
ttagaagactctccgtatacacccccttctgattcacaaagaatgatttatgcaacttta
ttaaagagactaaaagaagagtcactgaaaggaattattggaccagattatgtgactgga
tcaaatcttccaagtcattctgatattcacatttcttgtcttacgggattaaaaatccag
ggccctgtgtttttccttgaagacgggaaatctgctatctccttgaatgatgctttgatg
tgggcaaaggtgaatccattctcacctttagggactggaatacgactcaatccattctga

>gi568815594r:176115603_176369108|GENSCAN_predicted_peptide_2|810_aa
MTLLLHITVKSILLSDQLLQVQLTRSRCSNEGPAVQEHPGREPGTFETWIQLKTAADSSA
AMSVLEENRPFAQQLSNVYFTILSLFCFKLFVKISLAILSHFYIVKGNRKEAARIAAEFY
GVTQGQAPMGEELKSLITLSGRADIQQICSPNQGEQRVPLRLQVGIKNSRSICTYDTWLS
QTKNVNQTMSADIAVEMNCIKQVLTKRRLVSIEECSSKRKASWGILTSQGSWADRSPLHE
AASQGRLLALRTLLSQGYNVNAVTLDHVTPLHEACLGDHVACARTLLEAGANVNAITIDG
VTPLFNACSQGSPSCAELLLEYGAKAQLESCLPSPTHEAASKGHHECLDILISWGIDVDQ
EIPHLGTPLYVACADVQKGKYWDTPLHAAAQQSSTEIVNLLLEFGADINAKNTELLRPID
VATSSSMVERILLQHEGRELAAMPLQLMQIRVTLTANTHYLYSSRDKAIKSLNLVRNCSR
ENFREYKCPTHTEENIQWNCCPKWIHAGCMMKGCDWLHIRSNHKNITLVHYIDDILLSRP
HEQEEASSLDTLERCSNPESVMAAAGQEKGYLTQTAAALDKSPSLSPQLAAPIRGRPKKC
LVYPHAPKSSRLSRSVLRWLQGLDLSFFPRNINRIKSIQDDFVNFTDYSYQMRLPLVSRS
TVSKSIKDNIRLSELLSNPNMLTNELKAEFLILLHMLQRKLGRKLNPGRPDLITQTLRSR
DLSSAGIKTHVGEGEVRDLECDRVSTCYCYKGQHGKHEKIIDIVKKSTVKIPVLFCSILI
TGARSPQSRTRCLLNQSGPSHVHPLRVVSP

>gi568815594r:176115603_176369108|GENSCAN_predicted_CDS_2|2433_bp
atgactttattacttcatattactgtcaaatctatattactgtcagatcagctacttcag
gtgcaactaactagatccaggtgctccaatgaaggaccagctgttcaggagcatcccgga
cgagagccaggcacatttgagacttggatccaactaaagaccgccgcagattcttctgca
gcaatgtcggtgttagaagaaaatcggccgtttgctcaacaattatccaatgtctacttt
acaatactttcgctgttctgttttaagctttttgtgaaaatcagccttgccatcctcagt
catttctacatagtgaaaggcaaccgcaaggaagcggcaaggatagcagctgaattttat
ggagtaacccaaggacaagcaccaatgggagaagaactgaagtctcttattaccctcagt
ggtagagcagacattcagcagatctgctctcccaatcagggagagcagagagtcccacta
agactgcaggttggaataaagaacagcaggagcatttgcacttatgacacctggttgtca
cagacaaaaaacgtcaaccaaactatgtccgcagatattgctgttgaaatgaactgcatt
aagcaggtcctcacgaaaagaaggctagtgagtatagaggaatgttcttctaaacgaaaa
gctagctggggtattctgaccagtcaaggttcctgggcagatcgatcaccactacatgaa
gcagcaagtcaaggtcgccttcttgctctgagaacattattatcacagggttataatgta
aatgcagtaaccttagaccatgtcaccccattgcacgaagcctgccttggagatcacgtg
gcatgtgccagaactctgctggaagcaggagctaatgtaaatgcaatcacgatagatggc
gtgactccgttattcaacgcatgctcccaaggcagtccaagctgtgcagagctgcttctg
gagtatggtgccaaagcccagctggagtcatgtcttccatccccaacgcatgaggccgcc
agtaaaggtcaccatgaatgtcttgacatcctgatatcctggggcatagatgttgaccaa
gaaattcctcatttgggaactcctctctatgtagcttgtgctgacgtacagaaaggcaaa
tattgggatactccattacatgctgctgctcaacaatccagcacagaaattgtaaactta
ctgctagaatttggagcagatatcaatgccaaaaatacagagcttctgcgacctatagat
gtagctacgtctagcagtatggtggaaaggatattgcttcaacatgaaggaagggagctg
gcagctatgcctctgcagttgatgcaaataagggtgactcttactgccaacactcattat
ctttatagctccagagataaggcaattaaaagcttgaatctggtgaggaattgctcaaga
gagaactttagagaatataaatgccctacacatacagaagaaaacatccagtggaattgc
tgtcctaagtggattcatgcaggctgcatgatgaagggctgtgactggctgcacattcgt
tccaatcacaagaacatcacactagtccactatattgatgatatcctgctgagtcgacct
catgaacaggaagaagcaagttccttagatactttagaaagatgcagcaacccagaaagc
gtcatggctgccgccggccaggaaaaagggtatttgacacagactgcggcagccctagac
aagtcaccgtcactttcgccacagctagcagctcccatccgagggaggcctaagaagtgt
ctggtctatccgcatgcgccgaagagctcccgcttgtctcgttccgttctgcgttggctt
cagggtctggatctcagcttcttccccaggaacatcaacagaattaaaagtatccaggat
gactttgtgaatttcacggactatagctaccagatgcgtttacccctggtttccaggtct
acagtttcgaagtctattaaagataacattaggttatcagaattactaagcaatcccaac
atgctgaccaatgaacttaaagcggagttcctcatccttttacatatgttgcaaagaaaa
ttaggcagaaaattgaatccaggcagacctgatctaatcacacaaacccttagaagcaga
gatctttcttcagctggaatcaagacacatgtaggagaaggagaagtaagagatctggag
tgtgatagggtctcaacctgctattgctacaagggacaacatggaaagcatgagaagatt
atagacattgtaaagaaaagcactgtgaagatccctgtcctgttctgttccattctaatt
accggtgcacgcagcccccagtcacgtacccgctgcttgctcaatcaatcaggaccctct
cacgtgcacccccttagagttgtgagcccttaa

>gi568815594r:176115603_176369108|GENSCAN_predicted_peptide_3|460_aa
MAVKLIGCNRGSKLFKQGKKMANTKLKTAERCLFPTILNRYTSGMCINYAHEKGTLQSSF
KLEVYLDIKVYLLKWADNGSADVHPRSIRTISNKHQYSNLKKKKKEPPGNPTEARPRARR
QRLEGLACGPRAAPDAREAPAQAGGGAGSAVVLLPHWPGVGGGNMIRETCSRTGTLLSLK
AVVMKQPKVSAAITLSEKANSEFARDSTVFIAIVSHESGLHTHTQAPVPAADRLPAIRAV
CARLHPGEINSLVAHTKPVWWSLHMDAREIWCHDSDRGTSLGRSIPCPPALCCMRKIHLR
PQVLRPTSPKNISPILNPFCLAQGVFFLCVSSTYMCLPANWTGTCTLVFLTPKIQFANRT
EELPVPLMTPTRQKRVIPLIPLLVSLRLSAFTIALGTGIAGISTSVTTFRSLSNDFSASI
TDVSQTLSVLQAQVDSLAAVVLQNRRGLDLLLKKEDSVYS

>gi568815594r:176115603_176369108|GENSCAN_predicted_CDS_3|1383_bp
atggcagtaaagctgataggatgcaacagaggtagtaaacttttcaagcaaggcaagaaa
atggctaacacaaaactgaagaccgcagaaaggtgcctatttccaactatactcaacaga
tacacaagtggaatgtgtataaattatgcacatgaaaagggaacacttcaaagctccttc
aagcttgaggtttatttggatataaaggtatacttattaaagtgggctgacaatggcagt
gctgatgtccaccccaggtctattcgaacaatatctaacaaacatcagtacagtaattta
aaaaaaaaaaaaaaagagccgccaggaaaccccacggaagcccgacccagagcgcggcgg
cagcgcctggagggcctcgcatgcggaccacgagcggcaccggacgcgcgggaggcgcca
gcccaggcgggcggcggcgccggctctgctgttgtgttgctccctcattggccaggcgtg
ggtggagggaacatgatccgcgagacgtgcagccgcaccgggacgctcctgtctttgaag
gcggtggtgatgaagcagccgaaggtgagcgccgccatcacgctcagcgagaaggcgaac
agtgagttcgcccgcgacagcaccgtgttcatcgcgatcgtctcccacgagtccggactc
cacacgcacacccaggctcccgttccggcggcggaccggctccctgcgatccgcgccgtc
tgcgcccgcctgcacccaggtgaaataaacagccttgttgctcacacaaagcctgtttgg
tggtctcttcacatggacgcacgtgaaatttggtgccatgactcagatcgggggacctcc
cttgggagatcaatcccctgtcctcctgctctttgctgcatgagaaagatccacctacga
cctcaggtcctcagaccgaccagcccaaagaacatctcaccaattttaaatccgttttgc
ctcgcacaaggtgtcttcttcctctgtgtatcctctacctacatgtgtctacctgctaat
tggacaggcacatgcacactagttttccttactcccaaaattcaatttgcaaataggacc
gaagagctccctgttcccctcatgacaccgacacgacaaaaaagagttattccactaatt
cccttgcttgtcagtttaagactttctgccttcactattgctctcggtactggaatagca
ggcatttcaacctctgtcacgaccttccgtagcctctctaatgacttctctgctagcatc
acagacgtatcacaaactttatcagtcctccaggcccaagttgactctttagctgcagtt
gtcctccaaaaccgccgaggccttgacttactgctgaaaaaggaggactctgtatattct
taa

>gi568815594r:176115603_176369108|GENSCAN_predicted_peptide_4|210_aa
MGQVWALVRSTLEPFHTDDEEKGEYNEVTEEVTEQVCLPAKAKVAKEGEVYPYPSAPPPY
FEEKEWPDPPDLSFLEDAGQKVIAPVTVQAAPQAIALSSIQAGIQQARREGDLEAWQFPI
RIHPPDQQGNIIATFEPFPFKLLKESKQAINQYGQGSPFVMELLKNVAVSSQMIPTDWDA
LAQACLTLTQFLQFKTLWADEVSIQAACNA

>gi568815594r:176115603_176369108|GENSCAN_predicted_CDS_4|633_bp
atgggacaagtgtgggctctggttcgttccaccttggaaccttttcacactgatgatgag
gagaaaggagagtataatgaagtaacagaagaagtaacagagcaagtttgtttgcctgct
aaagctaaagtggcaaaggagggagaggtttatccctatccttctgcaccccctccttat
tttgaagaaaaagagtggcctgaccctccagatctttcttttctggaggatgctgggcaa
aaagtgattgccccagtgactgttcaagcagcgcctcaagcgatcgctctcagttctatt
caggcaggaattcagcaagctagaagagagggtgatttagaggcttggcagttccctatt
agaatacaccccccagatcaacagggaaatattatagctacatttgagccttttcctttt
aaattactcaaagaatctaaacaagctattaatcaatatggacaaggttctccttttgta
atggaactgttaaagaatgttgctgtttccagtcagatgattcctactgactgggatgct
cttgctcaagcttgtctaactcttactcagttcttacaatttaaaaccttgtgggcagat
gaagtttccattcaggctgcttgtaatgcctag

>gi568815594r:176115603_176369108|GENSCAN_predicted_peptide_5|111_aa
MLAVVRGCDCSKCLVESFCFASTALRISVGRFYFALCSLTDKPVANTYGWELAVANVARP
AMEESTIPVPTAEVLSTILAVEAPTLLQSMTSKMWPETEMPAWPQCQVAKE

>gi568815594r:176115603_176369108|GENSCAN_predicted_CDS_5|336_bp
atgctggcagttgtcagggggtgtgactgtagcaaatgtttggtggaatctttttgcttt
gcttccacagctttacgcatttcagttgggaggttttattttgcgctgtgcagtttgact
gacaagccagtagctaacacttatgggtgggagctggcagtggccaatgtggccaggcct
gcgatggaggagagcacaattccagtgcctactgctgaggtgctttctacgattctggct
gtggaggcccctaccctgctccagagcatgacctccaaaatgtggcctgagactgaaatg
cctgcatggccacagtgccaggtggccaaagaatga