GENSCAN 1.0 Date run: 6-Nov-116 Time: 06:12:01 Sequence gi568815594f:9269209_9329910 : 60702 bp : 49.02% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 3156 3701 546 2 0 106 76 356 0.464 31.11 1.02 Term + 55927 57549 1623 0 0 11 39 1184 0.030 95.71 1.03 PlyA + 57684 57689 6 -3.94 2.03 PlyA - 57865 57860 6 -3.74 2.02 Term - 58266 57993 274 2 1 53 52 169 0.856 4.74 2.01 Intr - 59403 59144 260 0 2 49 103 134 0.736 7.26 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Sngl + 55957 57549 1593 0 0 106 39 1143 0.883 106.57 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815594f:9269209_9329910|GENSCAN_predicted_peptide_1|722_aa MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVAR QLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRH KGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMEKACLPGH KQTNLVILVPVDMEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETR VDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYM LSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFT VDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQ AAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTG NKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYK MDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGEL KRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQ SKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLV CQ >gi568815594f:9269209_9329910|GENSCAN_predicted_CDS_1|2169_bp atggaggacgactcactctacttgggaggtgagtggcagttcaaccacttttcaaaactc acatcttctcggcccgatgcagcttttgctgaaatccagcggacttctctccctgagaag tcaccactctcatgtgagacccgtgtcgacctctgtgatgatttggctcctgtggcaaga cagcttgctcccagggagaagcttcctctgagtagcaggagacctgctgcggtgggggct gggctccagaatatgggaaatacctgctacgtgaacgcttccttgcagtgcctgacatac acaccgccccttgccaactacatgctgtcccgggagcactctcaaacgtgtcatcgtcac aagggctgcatgctctgtacgatgcaagctcacatcacacgggccctccacaatcctggc cacgtcatccagccctcacaggcattggctgctggcttccatagaggcaagcaggaagat gcccatgaatttctcatgttcactgtggatgccatggaaaaggcatgccttcccgggcac aagcagacaaaccttgtgatcctcgttccagtcgacatggaggacgactcactctacttg agaggtgagtggcagttcaaccacttttcaaaactcacatcttctcggcccgatgcagct tttgctgaaatccagcggacttctctccctgagaagtcaccactctcatgtgagacccgt gtcgacctctgtgatgatttggctcctgtggcaagacagcttgctcccagggagaagctt cctctgagtagcaggagacctgctgcggtgggggctgggctccagaatatgggaaatacc tgctacgtgaacgcttccttgcagtgcctgacatacacaccgccccttgccaactacatg ctgtcccgggagcactctcaaacgtgtcatcgtcacaagggctgcatgctctgtactatg caagctcacatcacacgggccctccacaatcctggccacgtcatccagccctcacaggca ttggctgctggcttccatagaggcaagcaggaagatgcccatgaatttctcatgttcact gtggatgccatgaaaaaggcatgccttcccgggcacaagcaggtagatcatcactctaag gacaccaccctcatccaccaaatatttggaggctactggagatctcaaatcaagtgtctc cactgccacggcatttcagacacttttgacccttacctggacatcgccctggatatccag gcagctcagagtgtccagcaagctttggaacagttggtgaagcccgaagaactcaatgga gagaatgcctatcattgtggtgtttgtctccagagggcgccggcctccaagacgttaact ttacacacctctgccaaggtcctcatccttgtattgaagagattctccgatgtcacaggc aacaagattgccaagaatgtgcaatatcctgagtgccttgacatgcagccatacatgtct cagccgaacacaggacctctcgtctatgtcctctatgctgtgctggtccacgctgggtgg agttgtcacaacggacattacttctcttatgtcaaagctcaagaaggccagtggtataaa atggatgatgccgaggtcaccgcctctagcatcacttctgtcctgagtcaacaggcctac gtcctcttttacatccagaagagtgaatgggaaagacacagtgagagtgtgtcaagaggc agggaaccaagagcccttggcgcagaagacaccgacaggcgagcaacgcaaggagagctc aagagagaccacccctgcctccaggcccccgagttggacgagcacttggtggaaagagcc actcaggaaagcaccttagaccactggaaattccttcaagagcaaaacaaaacgaagcct gagttcaacgtcagaaaagtcgaaggtaccctgcctcccgacgtacttgtgattcatcaa tcaaaatacaagtgtgggatgaagaaccatcatcctgaacagcaaagctccctgctaaac ctctcttcgtcgaccccgacacatcaggagtccatgaacactggcacactcgcttccctg cgagggagggccaggagatccaaagggaagaacaaacacagcaagagggctctgcttgtg tgccagtga >gi568815594f:9269209_9329910|GENSCAN_predicted_peptide_2|177_aa WEKAKISRAYPGFSHRSFRIGDVASISSYALYGGIAVSTFGAKIVMLPKVDMFPEVRGTE FGCVFRLSGLAGMKILALGIFPTCLRRLLPDDLHARGKIFRFDSWEAGTVKQASRSVRFR RYVGSSKSTSPRAPEVHSGTSVKTASPGKKEEHRSSLPNAFQFPLFKVARMIHGCPT >gi568815594f:9269209_9329910|GENSCAN_predicted_CDS_2|534_bp tgggaaaaggccaaaataagccgtgcatatcctggattctcgcatcgatcgttcaggatc ggagatgttgcctccatttccagttacgcattgtatggtggaattgcagttagcacattt ggtgccaaaattgtaatgctgccgaaagtggacatgttccctgaagtaagagggacagaa tttgggtgtgtcttccggctgtctggcttagcaggaatgaagatcctggctctagggatt ttcccaacatgtcttagacgcttacttccagatgacttacatgcccgtgggaaaattttc cgtttcgactcatgggaagcgggcaccgtgaaacaggcaagtcggtctgtccgcttccgg cgttatgtgggttccagcaagagcacaagtcccagggcgcctgaggtccattcaggaacc agtgtaaaaacggcgagcccggggaagaaagaagagcaccgttcttctcttccaaatgca ttccagtttccactattcaaggtggcgagaatgatccacggatgtcccacatga