GENSCAN 1.0 Date run: 6-Nov-116 Time: 06:12:08 Sequence gi568815594f:9250220_9258123 : 7904 bp : 48.77% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Sngl + 3054 4751 1698 2 0 41 39 1228 0.799 108.27 1.02 PlyA + 4886 4891 6 -3.94 2.03 PlyA - 5067 5062 6 -3.74 2.02 Term - 5468 5195 274 1 1 53 52 169 0.834 4.74 2.01 Intr - 6605 6346 260 2 2 49 103 134 0.710 7.26 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815594f:9250220_9258123|GENSCAN_predicted_peptide_1|565_aa MRQRARHLKTLSEGIASFCNLRSQQKNLVILVPVDMEEDSLYLGGEWQFNHFSKLTSSRP DAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNM GNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQP SQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQI KCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASK TLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVH AGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESV SRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNK TKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTL ASLRGRARRSKGKNKHSKRALLVCQ >gi568815594f:9250220_9258123|GENSCAN_predicted_CDS_1|1698_bp atgcgccagagagctcgtcatttgaagactctctcggaagggatagcgtctttctgcaac ctgcggtcccagcagaaaaaccttgtgatccttgttccagtcgacatggaggaagactca ctctacttgggaggtgagtggcagttcaaccacttttcaaaactcacatcttctcggccc gatgcagcttttgctgaaatccagcggacttctctccctgagaagtcaccactctcatgt gagacccgtgtcgacctctgtgatgatttggctcctgtggcaagacagcttgctcccagg gagaagcttcctctgagtagcaggagacctgctgcggtgggggctgggctccagaatatg ggaaatacctgctacgtgaacgcttccttgcagtgcctgacatacacaccgccccttgcc aactacatgctgtcccgggagcactctcaaacgtgtcatcgtcacaagggctgtatgctc tgtacgatgcaagctcacatcacacgggccctccacaatcctggccacgtcatccagccc tcacaggcattggctgctggcttccatagaggcaagcaggaagatgcccatgaatttctc atgttcactgtggatgccatgaaaaaggcatgccttcccgggcacaagcaggtggatcat cactctaaggacaccaccctcatccaccaaatatttggaggctactggagatctcaaatc aagtgtctccactgccacggcatttcagacacttttgacccttacctggacatcgccctg gatatccaggcagctcagagtgtccagcaagctttggaacagttggtgaagcccgaagaa ctcaatggagagaatgcctatcattgtggtgtttgtctccagagggcgccggcctccaag acgttaactttacacacctctgccaaggtcctcatccttgtattgaagagattctccgat gtcacaggcaacaagattgccaagaatgtgcaatatcctgagtgccttgacatgcagcca tacatgtctcagacgaacacaggacctctcgtctatgtcctctatgctgtgctggtccac gctgggtggagttgtcacaacggacattacttctcttatgtcaaagctcaagaaggccag tggtataaaatggatgatgccgaggtcaccgcctctagcatcacttctgtcctgagtcaa caggcctacgtcctcttttacatccagaagagtgaatgggaaagacacagtgagagtgtg tcaagaggcagagaaccaagagcccttggcgcagaagacacagacaggcgagcaacgcaa ggagagctcaagagagaccacccctgcctccaggcccccgagttggacgagcacttggtg gaaagagccactcaggaaagcaccttagaccactggaaattccttcaagagcaaaacaaa acgaagcctgagttcaacgtcagaaaagtcgaaggtaccctgcctcccgacgtacttgtg attcatcaatcaaaatacaagtgtgggatgaagaaccatcatcctgaacagcaaagctcc ctgctaaaactctcttcgacgaccccgacacatcaggagtccatgaacactggcacactc gcttccctgcgagggagggccaggagatccaaagggaagaacaaacacagcaagagggct ctgcttgtgtgccagtga >gi568815594f:9250220_9258123|GENSCAN_predicted_peptide_2|177_aa WEKAKISRAYPGFSHRSFRIGDVASISSYALYGGIAVSTFGAKIVMLPKVDMFPEVRGTE FGCVFRLSGLAGMKILALGIFPTCLRRLLPDDLHARGKIFRFDSWEAGTVKQASRSVRFR RYVGSSKSTSPRAPEVHSGTSVKTASPGKKEEHRSSLPNAFQFPLFKVARMIHGCPT >gi568815594f:9250220_9258123|GENSCAN_predicted_CDS_2|534_bp tgggaaaaggccaaaataagccgtgcatatcctggattctcgcatcgatcgttcaggatc ggagatgttgcctccatttccagttacgcattgtatggtggaattgcagttagcacattt ggtgccaaaattgtaatgctgccgaaagtggacatgttccctgaagtaagagggacagaa tttgggtgtgtcttccggctgtctggcttagcaggaatgaagatcctggctctagggatt ttcccaacatgtcttagacgcttacttccagatgacttacatgcccgtgggaaaattttc cgtttcgactcatgggaagcgggcaccgtgaaacaggcaagtcggtctgtccgcttccgg cgttatgtgggttccagcaagagcacaagtcccagggcgcctgaggtccattcaggaacc agtgtaaaaacggcgagcccggggaagaaagaagagcaccgttcttctcttccaaatgca ttccagtttccactattcaaggtggcgagaatgatccacggatgtcccacatga