GENSCAN 1.0 Date run: 6-Nov-116 Time: 06:12:07 Sequence gi568815594f:9231231_9239129 : 7899 bp : 48.85% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 3155 4772 1618 1 1 106 35 1157 0.599 104.69 1.02 Intr + 5745 5880 136 1 1 72 33 59 0.240 -1.57 1.03 Term + 6440 6683 244 2 1 77 53 90 0.121 -0.23 1.04 PlyA + 6862 6867 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ NO EXONS FOUND AT GIVEN PROBABILITY CUTOFF Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815594f:9231231_9239129|GENSCAN_predicted_peptide_1|665_aa MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVAR QLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRH KGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH KQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQL VKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPEC LDMKLYMSQTNSGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSIT SVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPEL DEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHP EQQSSLLNLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQWSQWKYRPTR IVIKVDQPQRKAAQGTTQSSVEPQNLGRNPAQAPKCAYEQGLRVTEHVHFRQHYNLGTKC ANCNSTIQCVTGNGGNISDPERSMRESRICTAYFGLFPLKQGPVLKMARYPLFHSLLLNV SDVSP >gi568815594f:9231231_9239129|GENSCAN_predicted_CDS_1|1998_bp atggaggacgactcactctacttgggaggtgagtggcagttcaaccacttttcaaaactc acatcttctcggcccgatgcagcttttgctgaaatccagcggacttctctccctgagaag tcaccactctcatgtgagacccgtgtcgacctctgtgatgatttggctcctgtggcaaga cagcttgctcccagggagaagcttcctctgagtagcaggagacctgctgcggtgggggct gggctccagaatatgggaaatacctgctacgtgaacgcttccttgcagtgcctgacatac acaccgccccttgccaactacatgctgtcccgggagcactctcaaacgtgtcatcgtcac aagggctgcatgctctgtacgatgcaagctcacatcacacgggccctccacaatcctggc cacgtcatccagccctcacaggcattggctgctggcttccatagaggcaagcaggaagat gcccatgaatttctcatgttcactgtggatgccatgaaaaaggcatgccttcccgggcac aagcaggtggatcatcactctaaggacaccaccctcatccaccaaatatttggaggctac tggagatctcaaatcaagtgtctccactgccacggcatttcagacacttttgacccttac ctggacatcgccctggatatccaggcagctcagagtgtccagcaagctttggaacagttg gtgaagcccgaagaactcaatggagagaatgcctatcattgtggtgtttgtctccagagg gcgccggcctccaagacgttaactttacacacctctgccaaggtcctcatccttgtattg aagagattctccgatgtcacaggcaacaagattgacaagaatgtgcaatatcctgagtgc cttgacatgaagctatacatgtctcagacgaactcaggacctctcgtctatgtcctctat gctgtgctggtccacgctgggtggagttgtcacaacggacattacttctcttatgtcaaa gctcaagaaggccagtggtataaaatggatgatgccgaggtcaccgcctctagcatcact tctgtcctgagtcaacaggcctacgtcctcttttacatccagaagagtgaatgggaaaga cacagtgagagtgtgtcaagaggcagggaaccaagagcccttggcgcagaagacacagac aggcgagcaacgcaaggagagctcaagagagaccacccctgcctccaggcccccgagttg gacgagcacttggtggaaagagccactcaggaaagcaccttagaccactggaaattcctt caagagcaaaacaaaacgaagcctgagttcaacgtcagaaaagtcgaaggtaccctgcct cccgacgtacttgtgattcatcaatcaaaatacaagtgtgggatgaagaaccatcatcct gaacagcaaagctccctgctaaacctctcttcgacgaccccgacacatcaggagtccatg aacactggcacactcgcttccctgcgagggagggccaggagatccaaagggaagaacaaa cacagcaagagggctctgcttgtgtgccagtggtctcagtggaagtaccgacccacacgt atagtgatcaaagttgaccaaccccagaggaaagctgcccagggcacaactcagagctcc gtagaaccacagaatcttgggcgcaaccctgctcaagcacccaaatgtgcatacgaacag ggtctccgtgtgacggaacatgtccactttcggcagcattacaatcttggcaccaaatgt gctaactgcaattccaccatacaatgcgtaactggaaatggaggcaacatctccgatcct gaacgatcgatgcgagaatccaggatatgcacggcttattttggccttttcccactgaaa caagggccagtattaaaaatggcacgctatcctctgtttcactccctgcttttaaacgtc tccgatgtttctccctga