GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:00:36

Sequence gi568815594f:68276323_68476501 : 200179 bp : 37.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2269   2409  141  0  0    9   33   165 0.510   2.73
 1.02 Intr +   6494   6553   60  1  0   62   79    93 0.087   3.81
 1.03 Intr +  24349  24639  291  0  0  -15   61   214 0.626   4.81
 1.04 Intr +  25988  26137  150  1  0  119   92    84 0.983  11.34
 1.05 Intr +  28365  28529  165  2  0  -12  105   124 0.719   3.34
 1.06 Term +  33111  33122   12  2  0  106   45     7 0.289  -4.57
 1.07 PlyA +  35072  35077    6                               1.05

 2.18 PlyA -  35322  35317    6                               1.05
 2.17 Term -  38001  37777  225  0  0  119   39   253 0.982  19.30
 2.16 Intr -  40126  39992  135  1  0   75   86    82 0.765   6.54
 2.15 Intr -  42540  42504   37  2  1   47  111    43 0.759  -0.15
 2.14 Intr -  46593  46427  167  0  2   95   72   151 0.991  12.04
 2.13 Intr -  53198  53068  131  0  2   78   59    34 0.543  -1.01
 2.12 Intr -  53988  53880  109  0  1   56  116    32 0.635   1.74
 2.11 Intr -  55875  55781   95  1  2  119   62    53 0.977   4.56
 2.10 Intr -  56525  56472   54  0  0   36   64    98 0.538   0.23
 2.09 Intr -  57075  56986   90  1  0   80   66    59 0.793   1.95
 2.08 Intr -  60218  60126   93  0  0   54  110    43 0.807   2.12
 2.07 Intr -  61128  60705  424  0  1   73   79   887 0.986  78.81
 2.06 Intr -  61578  61250  329  1  2   59   52   423 0.979  30.29
 2.05 Intr -  62062  61961  102  2  0   80   75   142 0.992  11.33
 2.04 Intr -  73535  73404  132  0  0   27   96   215 0.989  15.90
 2.03 Intr -  96210  96133   78  1  0   85   58    50 0.001   0.30
 2.02 Intr - 100146  99931  216  1  0   75   -6   203 0.012   7.15
 2.01 Init - 112227 112206   22  0  1  100  101    29 0.442   5.30
 2.00 Prom - 114777 114738   40                              -5.05

 3.00 Prom + 119563 119602   40                              -3.15
 3.01 Init + 124491 124585   95  2  2   56   64    64 0.550   0.70
 3.02 Term + 130143 130356  214  0  1   76   38   243 0.961  13.82
 3.03 PlyA + 131556 131561    6                               1.05

 4.00 Prom + 134915 134954   40                              -4.95
 4.01 Init + 144997 145289  293  0  2   39   36   286 0.573  15.17
 4.02 Intr + 147738 147835   98  0  2   46   40   107 0.041   0.43
 4.03 Term + 148134 148708  575  1  2   21   42   257 0.548   8.03
 4.04 PlyA + 148769 148774    6                               1.05

 5.00 Prom + 148886 148925   40                              -5.65
 5.01 Init + 148940 149355  416  1  2   71   38   171 0.451   6.39
 5.02 Intr + 159807 159901   95  0  2  105   95   -23 0.458  -1.21
 5.03 Intr + 171108 171201   94  1  1   67  109    43 0.010   2.40
 5.04 Intr + 185499 185623  125  0  2  106   92    44 0.971   5.91
 5.05 Intr + 190309 190430  122  2  2  115  103    40 0.997   7.49
 5.06 Intr + 192557 192624   68  1  2   70   91    25 0.898  -2.22
 5.07 Intr + 195138 195301  164  0  2   88  106    40 0.777   4.50
 5.08 Intr + 198401 198439   39  0  0  108   87    18 0.614   0.98
 5.09 Intr + 199939 200116  178  2  1  129  111    90 0.779  13.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:68276323_68476501|GENSCAN_predicted_peptide_1|272_aa
LLVAEEASGNLQSRWKVKKKQAPSSQGSKREKRRGGELPNTLKPSDLISEEEAPKPTGEV
SEGYVKKNILWEYSGYTEKFFKDVVLNKKLMTNLQESRSDVVHANAIGPFGELLAELLKI
SFVYSLHFSPGYTFEKYSGGFLLPPSYGAVILSELSGSMTFMETENALQLSEIMGKAEMW
LIRNYWYLEFPRPLLPNFEFVVRLYCKPVNPLPKFGSTFPDTNFYVAHNSVGTVRCLLQA
GSLTLPHTSIDPRELSTVKAHQPSWDFEELLP

>gi568815594f:68276323_68476501|GENSCAN_predicted_CDS_1|819_bp
ttactcgtggctgaggaagcctcaggaaacttacaatcccggtggaaggtgaagaagaag
caagcaccttcttcacaaggcagcaagagagagaaaaggagagggggtgaactgccaaac
actttaaaaccatcagatcttatctcagaggaagaagcacctaagcccactggggaggta
agtgaaggctacgtgaaaaagaatattctttgggaatattctggttatactgagaagttc
tttaaagatgtagttttgaacaagaaacttatgacaaacctacaagaatcaaggtctgat
gtcgttcatgcaaatgccattggtccctttggagagctgctggctgagctattaaaaata
tcctttgtgtacagtctccacttctctcctggctacacatttgagaaatacagtggagga
tttctacttccaccttcctatggagctgttattctgtcagaattaagtggttcgatgaca
ttcatggagacagaaaatgcactacaattatctgagataatgggaaaagctgaaatgtgg
ctcattcgaaactactggtatttggaatttcctcgcccactcttacctaattttgaattt
gttgtaagactctactgcaaacctgtcaaccccctgcctaagtttgggagtacgtttcct
gacacaaatttctatgtggctcacaatagcgtcggaactgtgagatgcctacttcaagct
ggctccttgactcttccacacacttcgattgaccctcgggaactgagtacagtgaaagct
catcaaccttcatgggattttgaggagcttttaccttga

>gi568815594f:68276323_68476501|GENSCAN_predicted_peptide_2|812_aa
MERQCLKYAALGTLGTAHRTAGAAAFLAGGAFALFALAGAGAGAGVTGGTGAVGIHGELK
RRLESGQVVHGLAGTWRRRGCHYTHFRPVSLKVSRRRFDMQTKVRYGLTDGPVLLPRLRR
PRESRLSGGGGGSGGNRRGAMAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKN
EKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEY
QRSERNKRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVD
RRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAE
EDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSF
TDGSVRSGSGTDGSVDWLRQGRQEGWGVRYKMEMKTINKILVEKSDEKKKERKRARGISP
IVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFLIKSNNHENVS
LAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGPYCTLKYCTQEAHYLSDL
YVAYTNVLPVKLILVKKCLKGDGYFEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRM
HSQPRSRGRPSRREPVRDVGRVFKGSTIPGSGQPPYPGMEQPPHHPYYQHHAPPPQAHPP
YSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRR
DRERDRGRDRERERERLCDRDRDRGERGRYRR

>gi568815594f:68276323_68476501|GENSCAN_predicted_CDS_2|2439_bp
atggagcgacaatgtctgaaatatgcagccctgggcacacttggcacagcccacaggaca
gcaggagcagcagcttttcttgcaggaggtgcatttgcactctttgcacttgcaggagcc
ggcgcaggtgcaggagtcactggcggcacaggagcagttgggatccatggcgagctgaag
aggcggctggagtcgggacaggttgtacacgggctcgctgggacttggaggaggcgtgga
tgccactacacccacttcagacccgtgagcctcaaagtgtctaggaggcggtttgatatg
cagactaaagtgagatacggactgacggacgggcccgtgcttctgccgcggctgcggcgc
ccgcgcgagtcgcgtctaagcggcggcggcggtggcagcggcggaaaccgaaggggagcc
atggcggctgacagtcgggaggagaaagatggagaacttaatgttctggatgatatttta
actgaagtaccagaacaagatgatgaactgtataatccagagagtgaacaagataaaaat
gagaaaaagggatcaaaaagaaaaagtgatcgaatggaatctactgataccaaacgacaa
aagccttctgtccattctagacaactggtttctaagccactgagctcatctgttagcaat
aacaaaagaatagttagtacaaaaggaaagtcagccacagagtataaaaatgaggaatat
caaagatctgaaagaaacaagcgtctagatgctgatcggaaaattcgtctatcaagtagt
gcctccagagaaccttataagaatcaacctgaaaaaacctgtgtccggaaaagggatcct
gaaaggagggccaaatctcctacgccagatggttctgagagaattgggcttgaagtggat
agacgtgcaagcagatccagccagtcttctaaggaagaagtgaactctgaagaatatggc
tctgaccatgagactggcagcagtggttcttctgatgagcaagggaacaacactgagaat
gaggaggaaggagtggaagaagatgtggaggaagatgaagaagtagaagaagatgcagaa
gaagatgaagaggtggatgaagatggagaggaggaggaggaagaggaggaggaggaagag
gaggaggaggaggaggaagaagaagaatatgaacaggatgagagagaccagaaagaggag
ggaaatgattatgacactcgaagtgaggccagtgactctggttctgaatctgtttccttc
acagatgggtctgtcagatctggttcaggcacagatggatcagttgactggctgagacag
ggtcgacaagagggctggggtgtaaggtataagatggagatgaagactataaataaaatt
cttgtggaaaaatcagatgagaaaaagaaggaaaggaagagagctagaggcatatctcca
attgtttttgatagaagtggaagctctgcatcagagtcatatgcaggttcagaaaagaag
catgagaaattatcatcttccgttcgtgctgtccgaaaagatcaaaccagtaaactcaaa
tatgtgcttcaagatgcaagatttttcctcataaagagtaacaaccatgagaatgtgtct
cttgccaaagcgaagggtgtatggtccacgctccctgtaaatgagaagaaattaaatctt
gcatttagatctgcaaggagtgttatcttaatattttctgtcagagagagtggaaaattt
caaggtccttactgcacactgaagtattgtacacaagaagctcattatttaagtgatctt
tacgtggcatacacaaatgtattacctgtaaaattaattttagttaaaaagtgtctgaaa
ggagatggttactttgaaattgaacttgaatgtggaacccagctttgtcttctgtttccc
cccgatgaaagtattgacttgtatcaggtcattcataaaatgcgtcacaagagaagaatg
cattctcagccccgatcacgaggacgtccatcccgtcgagaaccagtccgggatgtggga
agggtatttaaaggatccacgataccaggaagtggacagcccccttacccaggaatggaa
caacctccacaccatccttactatcagcaccatgctccacctcctcaagctcatccccct
tactcaggacatcatccagtaccacatgaagcaagatacagagataaacgagtacatgat
tatgatatgagggtggatgatttccttcgtcgcacacaagctgttgtcagtggccggaga
agtagaccccgtgaaagagaccgggaacgagagcgagaccgccctagagataacagacga
gacagagagcgagatagaggacgtgatagagaaagagaaagagagcgattatgtgatcga
gacagagaccgaggggagagaggtcgatatagaagataa

>gi568815594f:68276323_68476501|GENSCAN_predicted_peptide_3|102_aa
MPFPEVTEHPSPAKVSSLLQEMTLPGSYAKSILFLIGFDQLYPTRSNPKEVPNYGTRPLK
WLNSQKNDDNNNSNNNYKNGGVVAEKYTSKRKKKRKGFDFDY

>gi568815594f:68276323_68476501|GENSCAN_predicted_CDS_3|309_bp
atgcctttccctgaagtgacagaacatccttcacctgccaaggtcagcagtttgctacag
gagatgacacttccaggatcatatgccaagtctattctttttctcattgggtttgatcaa
ctctatccaactagatcaaatccaaaggaagttccaaattatggaacaaggcctctgaag
tggctaaattcccagaaaaacgacgacaacaacaacagcaacaacaactacaaaaacggt
ggtgtggtagcagagaaatataccagcaaaaggaaaaaaaagaggaaaggctttgatttt
gactactaa

>gi568815594f:68276323_68476501|GENSCAN_predicted_peptide_4|321_aa
MENDFDELKEDGFRRLVITNFSKLQEDVQTHCKEAKNLEKRLDKWLTRINSVEKSLKDLM
ELKTMAREVCDACTSFSSRFDQLEEGVSVIEDQMNEMQTKDNNHMIISIDAEKAFDKIQQ
PFMLKTLNKLAISNFSKFSGYKFNVQKSQGFLYTNNRQTERQVMSELPFTIASKTIKYQG
IQLTRDVKDLFKENYKPLFNEIKEDTNKWKKIPCSWIGRINILKMAILPKVIYRFNAIPI
KLPMTFFTELEKPTLKFMWNQKRAHIAKSVLSQKNKAGGIILPDFKLYYKATVTKTAWYW
YQNRDIDQWNRIEPPEIIPHI

>gi568815594f:68276323_68476501|GENSCAN_predicted_CDS_4|966_bp
atggagaatgactttgacgagttgaaagaagacggcttcagacgattggtaataacaaac
ttctccaagctacaggaggatgttcaaacccattgcaaagaagctaaaaaccttgaaaaa
agactagacaaatggctaactagaataaacagtgtagagaagtccttaaaggacctgatg
gagctgaaaaccatggcacgagaagtatgtgacgcatgcacaagcttcagtagccgattc
gatcaactggaagaaggggtatcagtgattgaagatcaaatgaatgaaatgcaaaccaaa
gacaacaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacag
cccttcatgctaaaaactctcaataaactagcgataagcaacttcagcaaattctcgggt
tacaaattcaatgtgcaaaaatcacaaggattcctatacaccaataatagacaaacagag
aggcaagtcatgagtgaactcccattcacaattgcttcaaagacaataaaataccaagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgttcaac
gaaataaaagaggacacaaacaaatggaagaaaattccatgctcatggataggaagaatc
aatattttgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatc
aagctaccaatgactttcttcacagaattggaaaaacctactttaaagttcatgtggaac
caaaaaagagcccacattgccaagtcagtcctaagccaaaagaacaaagctggaggcatc
atactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagaccaatggaacagaatagagcccccggaaataataccacac
atctag

>gi568815594f:68276323_68476501|GENSCAN_predicted_peptide_5|434_aa
MGNDFMIKAPKARATKAKIDKWDLIKLKGFCTAKETTIRVNRQPTEWEEIFAIYPSDKGL
ISRIYKELKQIYKKKNNSIKKWAKDMNRQFSKEDIYAANGHMKKCSSSLAIREMEIKTTM
RYHLTPVRTAIIKKSRNKRPPQLVCPILGLILTFQSWPGLAQYSARGSWTSHKVIDRAGF
THLDVDLDLHRTLHCWLAMMYRPDVVRARKRVCWEPWVIGLVIFISLIVLAVCIGLTVHY
VRYNQKKTYNYYSTLSFTTDKLYAEFGREASNNFTEMSQRLESMVKNAFYKSPLREEFVK
SQVIKFSQQKHGVLAHMLLICRFHSTEDPETVDKIVQLVLHEKLQDAVGPPKVDPHSVKI
KKINKTETDSYLNHCCGTRRSKTLGQSLRIVGGTEVEEGEWPWQASLQWDGSHRCGATLI
NATWLVSAAHCFTT

>gi568815594f:68276323_68476501|GENSCAN_predicted_CDS_5|1302_bp
atgggcaatgacttcatgattaaagcaccaaaagcaagggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagggcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggaggaaatttttgcaatctacccatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaatttacaagaaaaaaaacaactccatcaaa
aaatgggcaaaggatatgaacagacaattctcaaaagaagacatttatgcagccaacgga
cacatgaaaaagtgctcatcgtcactggccatcagagaaatggaaatcaaaaccacaatg
agataccatctcacaccagttagaacagcgatcattaaaaagtcaagaaacaagagacct
cctcagctcgtatgccctatcttaggattaatactcactttccagtcctggccaggcctg
gcccagtactctgcaagaggatcttggacctcccacaaagtcattgatagagctggattc
acacacttggatgtagacctcgaccttcacaggactcttcattgctggttggcaatgatg
tatcggccagatgtggtgagggctaggaaaagagtttgttgggaaccctgggttatcggc
ctcgtcatcttcatatccctgattgtcctggcagtgtgcattggactcactgttcattat
gtgagatataatcaaaagaagacctacaattactatagcacattgtcatttacaactgac
aaactatatgctgagtttggcagagaggcttctaacaattttacagaaatgagccagaga
cttgaatcaatggtgaaaaatgcattttataaatctccattaagggaagaatttgtcaag
tctcaggttatcaagttcagtcaacagaagcatggagtgttggctcatatgctgttgatt
tgtagatttcactctactgaggatcctgaaactgtagataaaattgttcaacttgtttta
catgaaaagctgcaagatgctgtaggaccccctaaagtagatcctcactcagttaaaatt
aaaaaaatcaacaagacagaaacagacagctatctaaaccattgctgcggaacacgaaga
agtaaaactctaggtcagagtctcaggatcgttggtgggacagaagtagaagagggtgaa
tggccctggcaggctagcctgcagtgggatgggagtcatcgctgtggagcaaccttaatt
aatgccacatggcttgtgagtgctgctcactgttttacaacn