GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:47:21

Sequence gi568815594f:67938544_68139647 : 201104 bp : 36.62% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   6094   5976  119  2  2   91   97   100 0.449  10.46
 1.03 Intr -   8028   7907  122  2  2   79   74    56 0.076   2.52
 1.02 Intr -  30904  29530 1375  2  1   66   53   357 0.448  16.95
 1.01 Init -  32489  31055 1435  2  1   44   40   524 0.498  34.52
 1.00 Prom -  32582  32543   40                              -6.15

 2.02 PlyA -  32751  32746    6                               1.05
 2.01 Sngl -  33725  33165  561  2  0   40   40   447 0.900  30.98
 2.00 Prom -  35525  35486   40                              -6.85

 3.12 PlyA -  36525  36520    6                               1.05
 3.11 Term -  39486  39203  284  1  2   44   49   182 0.952   4.50
 3.10 Intr -  43533  43260  274  0  1   37   64   146 0.107   3.29
 3.09 Intr -  46482  46357  126  0  0   65   68    75 0.219   3.16
 3.08 Intr -  53302  53240   63  1  0  133   66    68 0.970   7.10
 3.07 Intr -  55572  55439  134  1  2  113  116    15 0.961   6.24
 3.06 Intr -  60443  60378   66  0  0   95   55    71 0.004   2.46
 3.05 Intr -  61240  61202   39  2  0  108   87    41 0.002   3.28
 3.04 Intr -  64538  64502   37  2  1   78   95     6 0.001  -2.78
 3.03 Intr -  76513  76395  119  2  2  103   99    82 0.910  10.06
 3.02 Intr -  86041  85891  151  1  1   86   94    88 0.660   8.01
 3.01 Init -  88183  88145   39  1  0   64   95    25 0.845   1.04
 3.00 Prom -  88310  88271   40                              -7.85

 4.00 Prom +  90345  90384   40                              -8.85
 4.01 Init +  91608  91672   65  2  2   37   87    42 0.524  -0.33
 4.02 Intr +  92787  92914  128  0  2   51  115   100 0.767   8.40
 4.03 Intr +  93609  93742  134  1  2   87   93   -15 0.337  -1.66
 4.04 Term +  94199  94549  351  1  0   68   48   202 0.474   7.70
 4.05 PlyA +  96710  96715    6                               1.05

 5.00 Prom +  98895  98934   40                              -6.55
 5.01 Sngl + 100001 101107 1107  1  0   49   49  1093 0.997  96.32
 5.02 PlyA + 102210 102215    6                               1.05

 6.09 PlyA - 102687 102682    6                               1.05
 6.08 Term - 104543 104380  164  0  2   52   53    65 0.436  -3.48
 6.07 Intr - 106624 106477  148  1  1   55   71   113 0.269   5.19
 6.06 Intr - 120925 120783  143  2  2   55  115   102 0.501   8.75
 6.05 Intr - 126401 126142  260  1  2   65   89    94 0.015   3.38
 6.04 Intr - 130276 130075  202  2  1   73  100    -4 0.073  -3.28
 6.03 Intr - 133943 133780  164  1  2  113  113    97 0.989  13.40
 6.02 Intr - 143509 143368  142  2  1   90  105    55 0.001   5.89
 6.01 Intr - 160495 160344  152  0  2   85  110    77 0.677   8.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  63390  63540  151  0  1   69   48   192 0.909   9.70
S.002 Sngl + 139090 139608  519  0  0   43   40   289 0.894  15.39
S.003 Init + 144760 144808   49  0  1   77   99    23 0.939   3.46
S.004 Term + 145272 145441  170  1  2   53   37   182 0.927   6.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:67938544_68139647|GENSCAN_predicted_peptide_1|1017_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNHSTTWKLNNLLLSDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKISESRSWFFERNNKIDRLLARLIK
KKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHFYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSVEKE
GLLPNSFYEASIILIPKLGRDTTKKENFRPISLMNIDAKLLNKILANRIQQHIKKLIHHD
QVGFIPGMQGWFNIHKSINVIQHINRAKDENHMIISIDAEKAFDKIQQPFMLKTLNKLVL
EVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYK
INVQKSQAFLYTNNRQTESQIMSELPFTTASKRIKYLGIQLTRDVKDLFKENYKQLLKEI
KEDTSKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMPFFTELEKTTLKFIWNQK
RACIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIY
NYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPK
TIKTLEENLGIIIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQ
PRKWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHM
KKCSPSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRTVGFGTRSRNLKPWMIAVLIVLS
LTVVAVTIGLLVHFLVFDQKKEYYHGSFKILDPQINNNFGQSNTYQLKDLRETTENL

>gi568815594f:67938544_68139647|GENSCAN_predicted_CDS_1|3051_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagagatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccactcaactacatggaaactgaacaacctgctcctgagtgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattagtgaatcc
aggagctggttttttgaaaggaacaacaaaattgatagactgctagcaagactaataaag
aaaaaaagagagaaaaatcaaatagacgcaataaaaaatgataaaggggatatcaccaca
gatcccacagaaatacaaactaccatcagagaatactacaaacacttttacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatc
aatagtttaccaaccaaaaagagtccaggaccagatggattcacagctgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactattccaatcagtagaaaaagag
ggactcctccctaactcattttatgaggccagcatcattctgataccaaagctgggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaactc
ctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgat
caagtgggtttcatccctgggatgcaaggctggttcaatatacacaaatcaataaatgta
atccagcatataaacagagccaaagacgaaaaccacatgattatctcaatagatgcagaa
aaagcctttgacaaaattcaacaacctttcatgctaaaaactctcaataaattagtgttg
gaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaa
gaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctggaaaaccccatt
gtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaa
atcaatgtacaaaagtcacaagcattcttatacaccaacaacagacaaacagagagccaa
atcatgagtgaactcccattcacaactgcttcaaagagaataaaatacctaggaatccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaacaactgctcaaggaaata
aaagaggatacaagcaaatggaagaacattccatgctcatgggtaggaagaatcaatatc
gtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccattaagcta
ccaatgcctttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcctgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacacta
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtattggtaccaa
aacagagatatagatcaatggaacagaacagagccctcagaaataacgccgcatatctac
aactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaa
accataaaaaccctagaagaaaacctaggcattatcattcaggacataggcatgggcaag
gacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctagaaaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccaga
atctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgg
gcgaaggacatgaacagacacttctcaaaagaagacatttatgcagcaaaaaaacacatg
aaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagatac
catctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggacagtggga
tttggcacccgaagcagaaatctgaagccatggatgattgccgttctcattgtgttgtcc
ctgacagtggtggcagtgaccataggtctcctggttcacttcctagtatttgaccaaaaa
aaggagtactatcatggctcctttaaaattttagatccacaaatcaataacaatttcgga
caaagcaacacatatcaacttaaggacttacgagagacgaccgaaaatttg

>gi568815594f:67938544_68139647|GENSCAN_predicted_peptide_2|186_aa
MKLKTKARELREECRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIW
DYVKRPNLRLIGVTESDGENGTKLENTLQDIIQENFPNLARQSNVQIQEIQRMPQRYSSR
RATPRHIIVRFTKVEMKEKMLRAAREKGRVTFKGKPIRLTADLSAETLQARREWGPIFNI
LKEKNF

>gi568815594f:67938544_68139647|GENSCAN_predicted_CDS_2|561_bp
atgaagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccga
tgcgatcaactggaagaaagggtgtcagcaatggaagatgaaatgaatgaaatgaagcga
gaagggaagtttagagaaaaaagaataaaaagaaacgagcaaagcctccaagaaatatgg
gactatgtgaaaagaccaaatctacgtctgattggtgtaactgaaagtgatggggagaat
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagca
aggcagtccaacgttcagattcaggaaatacagagaatgccacaaagatactcctcgaga
agagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatg
ttaagggcagcaagagagaaaggtcgggttaccttcaaagggaagcccatcagactaaca
gcggatctctcggcagaaaccctacaagccagaagagagtgggggccaatattcaacatt
cttaaagaaaagaatttttaa

>gi568815594f:67938544_68139647|GENSCAN_predicted_peptide_3|443_aa
MSTSNIAFGAVLKINKLRLQYVMPGHITCECRGILSETVQAFSTIHATSIRRVGEAAVTK
LLKGLKFYYYQTSFQIPSIEYNPDFSVEHSKLSTDLKQKVSNEMRTTVTELVFCSDMNAA
QAEHILNSCCGLGKEFPSTKRIADGRIARKGPFPNMLREVEVEIISNDICNQVHVYVSSG
MICAGFLSGKLDACKGDSGGPLVIARDRNAWYLVGIPPSATRAIIELLSYSQAPLTSSFV
VTFINDMSSGLPDETHALLTSTFQAASSGEARQLVQQTCSAKEQPDCFFKQVSDLFPPDS
VRPPNMGLQTPPTGAFSWHQVGAPLGWSCQRKEQSSIFALLQPLLVIPSAQKLLLLISNF
GKVSGHKINVQKSLYTNNRQSESQIMNVLSFTIATKRIKYLGIQLTREMKDLFKENYKLL
LKEIGEDTNKRKNLGKERIHVHG

>gi568815594f:67938544_68139647|GENSCAN_predicted_CDS_3|1332_bp
atgagcacttcaaatatagcatttggtgccgtcttaaagattaataaactcaggctccag
tatgtgatgccaggccatataacttgtgagtgccgaggaattctgtctgaaacagtccag
gctttttctaccatacatgcaacctctattcggagagttggtgaggctgctgtgaccaaa
ctcttaaaaggcctgaagttttactattaccagacctccttccagatccccagtattgaa
tataatcctgatttttcagtagaacactcaaaacttagcaccgacctgaaacaaaaagtc
agtaacgagatgagaaccactgttactgaattggtgttctgctcagatatgaatgcagca
caagcagaacacattctgaacagctgttgtggtttagggaaggagtttccatccaccaaa
agaattgctgatggtcggattgcaagaaaaggtccctttcccaatatgctacgggaagtt
gaggtagagatcataagtaatgatatatgtaatcaagttcatgtgtatgtatcatcagga
atgatatgtgctggattcttgtcaggaaaactagatgcctgtaagggtgattctggaggt
cctctggttattgcacgtgatagaaatgcctggtaccttgttggaatacctccatctgca
acgagagccatcattgaacttcttagttattctcaagctcctctcaccagctcatttgta
gtgactttcataaatgatatgtcctctgggcttcctgatgaaacacatgccctgctgact
tcaactttccaggctgccagctctggagaggctaggcagttagtgcagcaaacctgctct
gccaaggagcagccagactgtttctttaagcaggtctctgatctatttcctcctgactcg
gtgagacctcccaacatgggtctccagacacctccaacaggagcattcagctggcatcag
gttggtgcccccctcggatggagctgccagaggaaggagcagtcttcaatctttgctctt
ttgcagcctttactagtgataccttcagcccaaaagcttcttctgctgataagcaacttc
ggcaaagtctcaggacacaaaatcaatgtgcaaaaatctctgtacaccaacaacaggcaa
tcagagagccaaatcatgaatgtactctcattcacaattgctacaaaaagaataaaatac
ctaggaatacagctaacaagggaaatgaaggacctcttcaaggagaactacaaactacta
ctcaaagaaattggagaggacacaaacaaacggaaaaacttggggaaagaaagaatccat
gttcatggatag

>gi568815594f:67938544_68139647|GENSCAN_predicted_peptide_4|225_aa
MGMRSFQKDLGPGEDNFKNLERSGDLPREINPLSSCYLLHEKDPPTTSNPQTNQPKEHLT
NFKSVRLIPNLSSFPPTCPHSPNPKRCFQSSFSTDPSDLSLHPKIAPPQVYNNREELQLL
ASSLRESLATSPAHKNFKMPKPQWPGVPSGLHPSGSCFTCWKSGHWAKECLWPGIPPKLY
PIYEGLHWKSDCPTHLATTPRAPGTLAQDSLTDSFPDLLSLAAED

>gi568815594f:67938544_68139647|GENSCAN_predicted_CDS_4|678_bp
atgggaatgcggagttttcaaaaagatttaggaccaggagaagataactttaaaaatctt
gaaagatcgggggacctccctcgggagatcaatcccctgtcctcctgctatttgctccat
gagaaagatccacctacgacatcgaatcctcagaccaaccagcccaaggaacatctcacc
aattttaaatcagtgcgactcatcccaaacctttcttctttccctcccacctgtccccac
agtcccaaccccaagcgttgctttcaatcttccttttctaccgacccatctgacctctcc
cttcatcccaagattgctcctcctcaggtgtacaataatagagaagagttgcaattactt
gcctcttctctgagagaaagcctagccacatctccagcacacaagaacttcaaaatgcct
aaaccacagtggccaggtgttccttcaggacttcatccctcaggatcttgcttcacgtgc
tggaaatctggccactgggccaaggaatgcctgtggcccgggatccctcctaagctgtat
cccatctatgagggactccactggaaatcggactgtccaactcacctggcaaccactccc
agagcccctggaactctggcccaagactctctgactgactccttcccagatcttctcagc
ttagcagctgaagactga

>gi568815594f:67938544_68139647|GENSCAN_predicted_peptide_5|368_aa
MCLLPRGFEPQAPEDLAQRSLVELREMLKLQERLLRNEKFICKLPDKGKKIFDSFAKLKA
AIAECEEVRRKNELFHPVSLDCKLRQKAIAEVDVGTDKARNSDPILDTSSLVPGCSSVDN
IKSSQTSQNQGLGRPTLEGDEETSEVEYTVNKGPASSNRDRVPPSSEASEHHPQHRVSSQ
AEDTSSSFDNLFIDRLQRITIADQGEQQSEENASTKNLTGLSSGTQKKPHYMEVLEMRAK
NPGPQLRKFKTNVLPFRQNDSSSHCQKSGSPISSKERRRRDKQHLDDITAARLLPLHHMP
TQLLSIEESLALQKQQKQNYEEMQAKLAAQKLAERPNIKMRSYNPEGESSGRYREVRDED
DDWSSDEF

>gi568815594f:67938544_68139647|GENSCAN_predicted_CDS_5|1107_bp
atgtgcttgctgccccgcggcttcgagccccaagctcccgaggacttggcgcagcggagt
ttggtggagctgcgggaaatgttgaagctccaggagagacttttgcgcaacgaaaaattc
atttgcaaattgcccgacaaaggtaaaaagatctttgactcttttgccaaactgaaagcc
gccattgcagaatgtgaagaagttagaagaaaaaatgaactgtttcaccctgttagttta
gactgtaagctaaggcaaaaagcaattgcagaagttgatgtgggtacagataaggcccgg
aattctgacccgatacttgatacttcatcactagttcctggatgttcctctgtagataac
atcaagtcatctcaaacctcacaaaaccagggacttggacgtcctactcttgaaggtgat
gaagagacttcagaggttgagtacacagtgaataagggcccagcttccagcaacagagac
agggtaccaccttcatctgaagctagtgagcatcacccgcagcatcgtgtttcaagtcag
gcagaagatacttccagcagctttgacaacctttttattgacaggttacagaggatcacc
attgcggaccaaggtgaacaacagtcagaagaaaacgcaagtactaagaacttgacaggc
ctttctagtgggactcagaagaaacctcattatatggaagtgctagaaatgcgagccaaa
aacccagggccccagctgcgtaaatttaaaaccaatgtgttaccttttcgacaaaatgat
tcatctagtcattgccagaagagtgggtctcctatttcctcaaaagagcggcggcgcagg
gataagcagcatcttgatgacatcacagcagctcggcttctaccacttcaccatatgccc
acgcagctgctctccatagaagaatccttggcacttcagaaacagcagaaacagaattat
gaggagatgcaagcaaagctcgcagcgcaaaaattagctgaaagaccgaatattaaaatg
cggagttataatccagaaggggagtcttcagggagataccgagaagtaagggatgaagat
gacgattggtcctctgatgaattctga

>gi568815594f:67938544_68139647|GENSCAN_predicted_peptide_6|458_aa
XPVEFSEAEFSRAEYQRKQQFWDSVRLALFTLAIVAIIGIAIGIVTHFVVEEICLMYVGL
LNILVSLSGKVPFWLYLGSRLATPPTSSQLFFIGGKERSPDEQGVDILIVLIFRYPSTDS
AEQIKKKIEKALYQSLKTKQLSLTINKPSFRLTRCGIRMTSSNMPLPASSSTQRIVQGRE
TAMEGEWPWQASLQLIGSGHQCGASLISNTWLLTAAHCFWKNKDPTQWIATFGATITPPA
VKRNVRKIILHENYHRETNENDIALVQLSTGVEFSNIVQRVCLPDSSIKLPPKTSVFVTG
FGSIVDDGPIQNTLRQARVETISTDVCNRKDVYDGLITPGMLCAGFMEGKIDACKCWLVG
AVAVVTLYGTLLGVCEWPGPLAMGPGKKSVSAYIFLSITRPGSAGSSSLRTDTNELPGQI
SSAQVSLPEEKQIKGHRMFYENLWCVKSLPLKEMNIRA

>gi568815594f:67938544_68139647|GENSCAN_predicted_CDS_6|1377_bp
nnacctgttgaattttcagaagctgaattctcacgagctgaatatcaaagaaagcagcaa
ttttgggactcagtacggctagctcttttcacattagcaattgtagcaatcataggaatt
gcaattggtattgttactcattttgttgttgaggagatctgtttgatgtatgttggctta
ctcaatattttggtctctctcagtgggaaagttcctttctggctgtatctgggcagccgt
cttgccactcccccaacaagttctcagttatttttcattggtggcaaagagaggagtcca
gatgaacaaggtgtggatattcttatagtgctcatatttcgatacccatctactgatagt
gctgaacaaatcaagaaaaaaattgaaaaggctttatatcaaagtttgaagaccaaacaa
ttgtctttgaccataaacaaaccatcatttagactcacacgctgtggaataaggatgaca
tcttcaaacatgccattaccagcatcctcttctactcaaagaattgtccaaggaagggaa
acagctatggaaggggaatggccatggcaggccagcctccagctcatagggtcaggccat
cagtgtggagccagcctcatcagtaacacatggctgctcacagcagctcactgcttttgg
aaaaataaagacccaactcaatggattgctacttttggtgcaactataacaccacccgca
gtgaaacgaaatgtgaggaaaattattcttcatgagaattaccatagagaaacaaatgaa
aatgacattgctttggttcagctctctactggagttgagttttcaaatatagtccagaga
gtttgcctcccagactcatctataaagttgccacctaaaacaagtgtgttcgtcacagga
tttggatccattgtagatgatggacctatacaaaatacacttcggcaagccagagtggaa
accataagcactgatgtgtgtaacagaaaggatgtgtatgatggcctgataactccagga
atgttatgtgctggattcatggaaggaaaaatagatgcatgtaagtgctggcttgtaggg
gctgtggctgttgtgactctttacggcaccctccttggtgtctgtgagtggcccggtccc
ctagccatgggcccaggcaaaaaatctgtgtctgcgtacattttcttatccatcactcgg
cctgggtctgcaggcagctcctccttaagaacagacacaaatgaattgccaggccagata
tcatcagcacaagtatcattgcctgaagaaaagcaaatcaagggccatagaatgttttat
gaaaacctctggtgtgttaaaagcttgcctctgaaagagatgaatatcagggcctga