GENSCAN 1.0	Date run: 24-Jul-118	Time: 16:40:49

Sequence gi568815594f:190092277_190275045 : 122279 bp : 44.38% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2579   2574    6                               1.05
 1.03 Term -   6639   5584 1056  0  0   15   39   243 0.003   4.24
 1.02 Intr -  16550  16246  305  0  2   52  115    68 0.340   2.21
 1.01 Init -  16747  16573  175  1  1   72  103   158 0.660  15.21
 1.00 Prom -  24686  24647   40                              -2.46

 2.00 Prom +  25779  25818   40                              -4.96
 2.01 Init +  28386  29016  631  2  1   96   31   222 0.392  12.94
 2.02 Intr +  29843  30137  295  0  1   80   55   164 0.015   8.37
 2.03 Term +  81317  82772 1456  2  1   -8   48   645 0.000  41.10
 2.04 PlyA +  90285  90290    6                               1.05

 3.00 Prom +  95713  95752   40                              -8.06
 3.01 Init +  96049  96124   76  0  1   43  100    54 0.737   2.93
 3.02 Term + 103698 103933  236  1  2  -69   35   303 0.753   5.78
 3.03 PlyA + 106700 106705    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -   6672   5584 1089  0  0   60   39   240 0.989  13.35
S.002 Sngl +  81498  82772 1275  2  0  101   48   637 0.950  54.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:190092277_190275045|GENSCAN_predicted_peptide_1|511_aa
MVISEEQMKLPSTKKVELLTWAQLKKLTQLAEKKPEEYKVNTNSREYAACSFNDCTNGGA
AAANYTYLAYVPFPPLIRTVTWIDNPIEVYVNNSAWVPGPTDDRGPAQPEEEGMMINISI
GYHYPPICLGKAPGCLIPTTQNWLVEVPTVSAISRFTYHMRIKYLGIKLTRDVKDFFKEN
YKPLLDEIKEDTNKWNNIPCSWIGRINIMKMAILPKVIYRFNAICIKLPMNFFAELEKTT
LKFIWNQKRVCIAKTILSQKNKPGGITLPEFELYYKATVTKTDWHWYQNRDIHQWNRAEP
SEIIPHIYNHLIFEKPDKNKQWGKDSLFNKWCLENWLAIHRKLKLDPFLTLYTKINSRWI
KDLHVRPKTIKTLEENLGNTIQDIGMGKDFMPKTPKAMATKAKMHKWDLIKLKSFCTEKE
TTIRVNRQPTEWEKIFAIYPSDKGLISRIYKELKFIRNKTNNLIKKWAKDMNRHFSKEGI
LCSQQTREKMLITGHQRNANQNHNEIPSHTS

>gi568815594f:190092277_190275045|GENSCAN_predicted_CDS_1|1536_bp
atggtgatatcagaagaacagatgaagttgccatccaccaagaaagtggagctgctgacc
tgggcccagctaaagaagctgacacagttagctgaaaaaaagcctgaagaatacaaggtt
aacacaaactccagagaatatgctgcttgcagctttaatgattgtaccaacggtggagca
gctgcagctaattatacttacttggcctatgtgcctttcccacccttaattcggacagtc
acttggatagataatcctattgaagtatatgttaataatagtgcatgggtaccaggcccc
acagatgaccgtggccctgcccaacctgaagaagaaggaatgatgataaacatttccatt
gggtatcattatcctcctatttgcctggggaaagcaccaggatgcttaatacctacaacc
caaaattggttggtagaagtacctactgtcagtgccatcagcagatttacttatcacatg
agaataaaatacctaggaatcaaacttacaagggatgtgaaggacttcttcaaggagaac
tacaaaccactgctcgatgaaataaaagaggacacaaacaaatggaacaacattccatgc
tcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttataga
ttcaatgccatttgcatcaagctaccaatgaatttctttgcagaattggaaaaaactact
ttaaagttcatatggaaccaaaaaagagtctgcattgccaagacaatcctaagccaaaag
aacaaacctggaggcatcacactacctgaattcgaactatactacaaggctacagtaaca
aaaacagattggcattggtaccaaaacagagatatacaccaatggaacagagcagagcca
tcagaaataataccacacatctacaaccatctgatctttgagaaacctgacaaaaacaag
caatggggaaaggattccctatttaataaatggtgcttggaaaactggctagccatacat
agaaagctgaaactggatcccttccttacactttatacaaaaattaattcaagatggatt
aaagacttacatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaatacc
attcaggacataggcatgggcaaggacttcatgcctaaaacaccgaaagcaatggcaaca
aaagccaaaatgcacaaatgggatctaattaaactaaagagcttctgcacagaaaaagaa
actaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaatctaccca
tctgacaaaggactaatatccagaatctacaaagaactcaaatttataagaaataaaaca
aacaacctcatcaagaagtgggcaaaggatatgaacagacacttctcaaaagaaggcatt
ttgtgcagccaacagacacgtgaaaaaatgctcatcactggccatcagagaaatgcaaat
caaaaccacaatgagataccatctcacaccagttag

>gi568815594f:190092277_190275045|GENSCAN_predicted_peptide_2|793_aa
MPPLYCVQEDPAVPRSQQGPLATNGSKRTLQLPQSPAGGTLAQRLQQVGPLVPGRKEGAT
WLFRLLRFRLSLRCAPGGVRHCACAAPPSPRLAECISAPAPRPRAGVRLRACALSSAPRS
RSSLRLRHAAVRLCACIAPPPRRRASARLCACARLCAGAALAFFSAPAPRPPALALFSAP
ALRRHFFSASAPRQRPFLPLRGAPAPVPRRRTRRRFSLRLRCTDVFFCACDGSMPLRGRS
CVPLSADLESIAKEELRFPLQRLRGERDDGAAFCSAQTRGTSRRWSSACLSTDVGGTASF
WDNWGPHPRGGACLPVGLYKGGWLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS
VKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRER
LAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLR
AFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGGG
HPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGISQ
PAPARGDFAYAAPAPPDGALSHPQAPRWPPHPGKSREDRDPQRDGLPGPCAVAQPGPAQA
GPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQG
IPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAP
LSEEEYRALLEEL

>gi568815594f:190092277_190275045|GENSCAN_predicted_CDS_2|2382_bp
atgccgccactatactgtgtgcaagaggaccctgcggtgccccgcagccagcaggggccg
ctggccactaatggaagcaagagaaccctgcagttgccccagtcaccagcagggggcacg
ctggcacagcgccttcagcaagtgggccctttagtgcccggccgcaaggagggggcaacc
tggcttttcagattactgaggttccgcctatctctgcgctgcgccccaggcggcgtgcgt
cactgcgcctgcgccgcgcccccctccccgcgcctggcggagtgcatctccgcgcctgcg
cctcgcccccgcgctggcgtgcgtctccgcgcctgcgccttgtcctcggcgccgcgctcg
cgttcttctctgcgtctgcgccacgcagccgtgcgtctctgcgcgtgcatcgcgccccca
cctcggcgacgcgccagcgcccgactctgcgcctgcgcccgtctttgcgccggcgccgcg
ctggcgtttttctctgcgcctgcgccgcgacccccggcgctggcgcttttctcggcgcct
gcgctgcgccgccattttttttctgcgtctgcgccgcgccagcgtccttttctgcccctg
cgcggagctcccgccccggtgccgcgccggcggacgcgccgtcgtttttctctgcgcctg
cgctgcaccgacgtttttttctgcgcctgcgatggctctatgcctttgcgagggcggagc
tgcgttcccctcagcgcagacctggagagcatcgcgaaggaggagctccgttttcctctg
cagagacttcggggggaacgcgatgacggagctgcattctgctcagcacagacgcggggg
acatcgcgaaggtggagcagcgcatgcctctccacagacgttgggggcactgcttcattt
tgggacaactgggggccacatccacggggtggagcctgcctgcctgtgggcctttacaag
ggcggctggctggctggctggctggctgtccgggcaggcctcctggctgcacctgccgca
gtgcacagtccggctgaggtgcacgggagcccgccggcctctctctgcccgcgtccgtcc
gtgaaattccggccggggctcaccgcgatggccctcccgacaccctcggacagcaccctc
cccgcggaagcccggggacgaggacggcgacggagactcgtttggaccccgagccaaagc
gaggccctgcgagcctgctttgagcggaacccgtacccgggcatcgccaccagagaacgg
ctggcccaggccatcggcattccggagcccagggtccagatttggtttcagaatgagagg
tcacgccagctgaggcagcaccggcgggaatctcggccctggcccgggagacgcggcccg
ccagaaggccggcgaaagcggaccgccgtcaccggatcccagaccgccctgctcctccga
gcctttgagaaggatcgctttccaggcatcgccgcccgggaggagctggccagagagacg
ggcctcccggagtccaggattcagatctggtttcagaatcgaagggccaggcacccggga
cagggtggcagggcgcccgcgcaggcaggcggcctgtgcagcgcggcccccggcgggggt
caccctgctccctcgtgggtcgccttcgcccacaccggcgcgtggggaacggggcttccc
gcaccccacgtgccctgcgcgcctggggctctcccacagggggctttcgtgagccaggca
gcgagggccgcccccgcgctgcagcccagccaggccgcgccggcagaggggatctcccaa
cctgccccggcgcgcggggatttcgcctacgccgccccggctcctccggacggggcgctc
tcccaccctcaggctcctcggtggcctccgcacccgggcaaaagccgggaggaccgggac
ccgcagcgcgacggcctgccgggcccctgcgcggtggcacagcctgggcccgctcaagcg
gggccgcagggccaaggggtgcttgcgccacccacgtcccaggggagtccgtggtggggc
tggggccggggtccccaggtcgccggggcggcgtgggaaccccaagccggggcagctcca
cctccccagcccgcgcccccggacgcctccgcctccgcgcggcaggggcagatgcaaggc
atcccggcgccctcccaggcgctccaggagccggcgccctggtctgcactcccctgcggc
ctgctgctggatgagctcctggcgagcccggagtttctgcagcaggcgcaacctctccta
gaaacggaggccccgggggagctggaggcctcggaagaggccgcctcgctggaagcaccc
ctcagcgaggaagaataccgggctctgctggaggagctttag

>gi568815594f:190092277_190275045|GENSCAN_predicted_peptide_3|103_aa
MSTVKTRVSLSLRLTWETWLQAIEEVGRKKIEENNTLVFTVDVKANKHQIRQAVKKLYDS
DVAKVTTLICPDKENKAYVRLAPDYDAFDVVTKLGSSKLSPAG

>gi568815594f:190092277_190275045|GENSCAN_predicted_CDS_3|312_bp
atgtccacagtgaagaccagagtttcgttgtccttaagactgacctgggagacgtggctg
caggccattgaggaagtcggccggaagaagatagaagaaaacaacacgcttgtgttcact
gtggatgttaaagccaacaagcaccagatcagacaggctgtgaagaagctctatgacagt
gatgtggccaaggtcaccaccctgatttgtcctgataaagagaacaaggcatatgttcga
cttgctcctgattatgatgctttcgatgttgtaacaaaattgggatcatctaaactgagt
ccagctggctaa