GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:51:20

Sequence gi568815593r:93582840_93783717 : 200878 bp : 38.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2116   2647  532  0  1  137   63   370 0.896  30.97
 1.02 Intr +   5078   5605  528  0  0   79   94   885 0.997  80.18
 1.03 Term +  10723  11003  281  2  2   76   41   416 0.959  30.32
 1.04 PlyA +  11321  11326    6                               1.05

 2.08 PlyA -  11361  11356    6                               1.05
 2.07 Term -  12200  12057  144  2  0   79   53   164 0.919   8.93
 2.06 Intr -  13257  13090  168  0  0   67   10   149 0.455   4.22
 2.05 Intr -  14275  14114  162  1  0   80   39    82 0.399   1.75
 2.04 Intr -  14454  14357   98  1  2   92   86    31 0.837   2.11
 2.03 Intr -  15087  14915  173  2  2   36   93   135 0.670   7.46
 2.02 Intr -  16961  16860  102  1  0   48   77    87 0.543   1.97
 2.01 Init -  21571  21138  434  1  2   67    9   200 0.602   5.99
 2.00 Prom -  21846  21807   40                              -6.55

 3.05 PlyA -  22433  22428    6                               1.05
 3.04 Term -  29112  29029   84  0  0  116   43    86 0.072   3.57
 3.03 Intr -  38290  38152  139  0  1  101   50    70 0.035   4.05
 3.02 Intr -  47641  47525  117  0  0   84   91    36 0.211   2.16
 3.01 Init -  49846  49839    8  1  2   77  111     0 0.250   1.56
 3.00 Prom -  86925  86886   40                              -3.25

 4.03 PlyA -  88298  88293    6                               1.05
 4.02 Term - 100456  99998  459  1  0  -33   48   765 0.992  54.50
 4.01 Init - 100878 100726  153  0  0   45   16   224 0.355  10.93
 4.00 Prom - 104892 104853   40                              -4.75

 5.00 Prom + 105603 105642   40                              -8.85
 5.01 Init + 108223 108354  132  0  0   69   13   108 0.598   1.59
 5.02 Term + 108400 108798  399  0  0    5   43   317 0.697  13.03
 5.03 PlyA + 108905 108910    6                               1.05

 6.00 Prom + 109664 109703   40                              -6.95
 6.01 Sngl + 109992 110393  402  2  0   45   48   240 0.987  11.72
 6.02 PlyA + 110451 110456    6                               1.05

 7.00 Prom + 112232 112271   40                              -6.25
 7.01 Init + 115611 115717  107  2  2   50   72    70 0.337   1.34
 7.02 Term + 120378 120450   73  0  1   77   36   148 0.359   4.90
 7.03 PlyA + 121565 121570    6                               1.05

 8.00 Prom + 127785 127824   40                              -5.35
 8.01 Init + 128700 128853  154  2  1   81  110    60 0.662   7.69
 8.02 Term + 152630 152814  185  0  2   49   38   162 0.736   4.02
 8.03 PlyA + 153365 153370    6                               1.05

 9.02 PlyA - 153894 153889    6                               1.05
 9.01 Sngl - 158652 157738  915  0  0   61   49   611 0.909  48.56
 9.00 Prom - 162088 162049   40                              -5.35

10.00 Prom + 163891 163930   40                              -5.05
10.01 Sngl + 179615 180322  708  1  0   59   38   299 0.808  17.97
10.02 PlyA + 180494 180499    6                               1.05

11.00 Prom + 180663 180702   40                              -5.75
11.01 Sngl + 182585 182938  354  1  0   60   38   206 0.851   8.60
11.02 PlyA + 184348 184353    6                               1.05

12.04 PlyA - 185923 185918    6                               1.05
12.03 Term - 187080 186883  198  0  0   83   47    54 0.335  -2.78
12.02 Intr - 190006 189884  123  1  0   98   84    76 0.421   8.06
12.01 Init - 192794 192732   63  2  0   74   57    49 0.340   1.60
12.00 Prom - 200072 200033   40                              -3.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_1|446_aa
RARAPRGPRRAARLPPALPGPKDMAMVVSSWRDPQDDVAGGNPGGPNPAAQAARGGGGGA
GEQQQQAGSGAPHTPQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKH
YGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQ
RGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIE
NICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLL
AAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSD
AAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKT
PIETLIRDMLLSGSSFNWPYMSIQCS

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_1|1341_bp
cgcgcccgcgcgccccgcggccctcggcgagcagctcggctccccccagcgctccccggg
cccaaagatatggcaatggtagttagcagctggcgagatccgcaggacgacgtggccggg
ggcaaccccggcggccccaaccccgcagcgcaggcggcccgcggcggcggcggcggcgcc
ggcgagcagcagcagcaggcgggctcgggcgcgccgcacacgccgcagaccccgggccag
cccggagcgcccgccacccccggcacggcgggggacaagggccagggcccgcccggttcg
ggccagagccagcagcacatcgagtgcgtggtgtgcggggacaagtcgagcggcaagcac
tacggccaattcacctgcgagggctgcaaaagtttcttcaagaggagcgtccgcaggaac
ttaacttacacatgccgtgccaacaggaactgtcccatcgaccagcaccaccgcaaccag
tgccaatactgccgcctcaagaagtgcctcaaagtgggcatgaggcgggaagcggttcag
cgaggaagaatgcctccaacccagcccaatccaggccagtacgcactcaccaacggggac
cccctcaacggccactgctacctgtccggctacatctcgctgctgctgcgcgccgagccc
taccccacgtcgcgctacggcagccagtgcatgcagcccaacaacattatgggcatcgag
aacatctgcgagctggccgcgcgcctgctcttcagcgccgtcgagtgggcccgcaacatc
cccttcttcccggatctgcagatcaccgaccaggtgtccctgctacgcctcacctggagc
gagctgttcgtgctcaacgcggcccagtgctctatgccgctgcacgtggcgccgttgctg
gccgccgccggcctgcatgcctcgcccatgtctgccgaccgcgtcgtggccttcatggac
cacatccgcatcttccaggagcaggtggagaagctcaaggcgctacacgtcgactcagcc
gagtacagctgcctcaaagccatcgtgctgttcacgtcagacgcctgtggcctgtcggat
gcggcccacatcgagagcctgcaggagaagtcgcagtgcgcactggaggagtacgtgagg
agccagtaccccaaccagcccagccgttttggcaaactgctgctgcgactgccctcgctg
cgcaccgtgtcctcctccgtcatcgagcagctcttcttcgtccgtttggtaggtaaaacc
cccatcgaaactctcatccgcgatatgttactgtctgggagcagcttcaactggccttac
atgtccatccagtgctcctag

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_2|426_aa
MRGAASPARSQTSTSHPGGARPGAASPRPGRSMSRSPTAPRAGRPSPRLDSDVALGPVTW
PRPPVPPRSPLLSPRVSTRGRRGWGGAAWWMRPEDDRGTLALPRLTTQPPNTLGGGPKHL
ANQDSQSFEENGPGPPPVFQTKGTKHRISNNHMEVQAPASTEKSFSPPDLKTKGEEAWCR
QAQVGSDRGDSRSPSPLNAKLGGRTSWEPTKNLCGCQSLRAWTNWKGGVPKAHGSPGEVW
LRAQGDCPAYTCWEPQAPVPRLPLAPRMKVLGHSRNRGLGKHRTLNPGQPGPYWGLSLRA
ERKPLTAPPSARRTGHCQPGLGRPTPPQSGSGSQWGSLILLGKRSGVNYGLSPTPPALGV
QPAGKSTEALRRYSWAWCRLLQLSKFPHAVKPRLPPPDTEAGCAPGAWCLETYRARDPAY
TTPWPN

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_2|1281_bp
atgagaggtgcggcttctccagcgcggagccagacaagtacttctcatcccggcggagcg
cggcccggcgcggccagcccgaggcccggacgttctatgtcaagaagccccacggccccc
cgggctggccgcccctccccgcggctggacagcgacgtcgcgctcgggcctgtcacgtgg
ccgcgcccccccgtgcccccgcggagccctttgttaagcccccgggtctccacgcgcggc
cgccgtggctggggcggtgccgcatggtggatgcgcccggaagacgatcggggtaccctg
gctttgcctcggctcaccacgcagcccccaaacaccttgggcggaggccccaagcacttg
gcaaatcaagattctcagtcctttgaggaaaacggccctgggccacctccagtgtttcaa
accaaaggcacaaagcaccgaatctccaacaaccacatggaagttcaggctccagcttcc
accgagaaatctttttctcctccagatctgaagacaaaaggagaggaggcctggtgcaga
caagctcaggtgggctcagatagaggggactccagatccccatcacccctgaatgcaaag
ctgggtggtcggacctcttgggagccaaccaagaacctttgtggctgccagagtttaaga
gcctggaccaactggaagggtggagtccccaaagctcatggttctcctggagaggtgtgg
ctgcgagcccagggcgactgcccggcctacacctgctgggagcctcaagccccggttcca
cggctccccctggcgccccgcatgaaggtcctgggccacagccgcaaccgggggctgggg
aaacacaggacgctgaacccggggcagcctggcccctactggggcctgtccctccgcgcc
gagaggaaaccgctgaccgctccgccctcagcccgcaggactggccactgtcagcccggc
ctgggtcggcccaccccaccccaatccggatccggcagccagtggggctccctgatactt
cttgggaagcggtcaggggttaactatggactctccccaacccctcctgctttaggtgtc
caacctgcagggaagtcaacagaggccctaagacgttattcctgggcgtggtgcagactt
ctccagctcagcaagttcccacatgcggtaaagccccggttgccgccgccagacactgaa
gccggctgcgcccccggtgcttggtgcctggagacttaccgggcgcgcgaccctgcctac
accactccctggcccaactga

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_3|115_aa
MNCLLSLVKLDFLPLQSQYNLNFKGLATVLAMERELACILCRHRPSRANFLEELSVYFQI
LYRSLRGQDQLPEAGCDAPLPPHQARRATLSPSCAFRHLSLFGSLLFAVALSKVQ

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_3|348_bp
atgaattgcctattatctctggtcaaacttgacttcttgcctttacagtctcaatacaat
ctcaactttaaagggcttgcaactgtgttagcaatggaaagagaacttgcttgtatctta
tgcaggcaccgaccgtcacgagctaacttcctggaagagctttccgtctattttcaaatt
ctttaccgaagcctcagaggccaagaccagctccctgaagccggctgtgacgcgccgctc
ccaccgcatcaagcacgaagagctaccttaagtccaagctgtgcttttcggcacctctcc
ctgtttggctctcttctttttgccgtcgcgttaagcaaagtacaataa

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_4|203_aa
MEDSMDMDMSPLRPQNYLFGCELKADKDDHFKVDNDENERQLSLRTASLGLRSAPGGGSK
VPQKKVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQN
GKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINY
VKNCFRMTNQEAIQDLWQWRKSL

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_4|612_bp
atggaagattcgatggacatggacatgagccccctgaggccccagaactatcttttcggt
tgtgaactaaaggccgacaaagatgatcactttaaggtggataatgatgaaaatgagcgc
cagttatccttaagaacggccagtttagggctgcggtctgcccctggaggtggtagcaag
gttccacagaaaaaagtaaaacttgctgctgatgaagatgatgacgatgatgatgaagag
gatgatgatgaagatgatgatgatgatgattttgatgatgaggaagctgaagaaaaagcg
ccagtgaagaaatctatacgagatactccagccaaaaatgcacaaaagtcaaatcagaat
ggaaaagactcaaaaccatcaacaccaagatcaaaaggacaagaatccttcaaaaaacag
gaaaaaactcctaaaacaccaaaaggacctagttctgtagaagacattaaagcaaaaatg
caagcaagtatagaaaaaggtggttctcttcccaaagtggaagccaaattcatcaattat
gtgaagaattgcttccggatgactaaccaagaggctattcaagatctctggcagtggagg
aagtctctttaa

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_5|176_aa
MRKNQCKKAENSKNQNASPPPNDHNSWPAREQNRMENDFDKLTEEHVLAQCKEAKNLEKR
LEELLTRINSLEKNINGLMELKSTAQELREAYTSINSQIDQAEGRISGIEHQLNEIKHED
KIREKRMKRNKQSLQEIWDYVKRPNLRLTGVPESDGENGTELENTLQDIIQEKFPN

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_5|531_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaatcagaatgcctctcctcct
ccaaatgatcacaactcctggccagcaagggaacaaaacaggatggagaatgactttgac
aaattgacagaagagcatgttctagctcaatgcaaggaagctaagaaccttgaaaaaagg
ttagaggaattgctaactagaataaacagtttagagaagaacataaatggcctgatggag
ctcaaaagcacagcacaagaacttcgtgaagcatatacaagtattaacagccaaattgat
caagcagaaggaaggatatcagggattgaacatcaacttaacgaaataaagcatgaagac
aagattagagaaaaaagaatgaaaaggaacaaacaaagcctccaagaaatatgggactat
gtgaaaagaccaaacctgcgtttgactggtgtacctgaaagtgacggggagaatggaacc
gagttggaaaacactcttcaggatattatccaggagaaattccccaactag

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_6|133_aa
MEIITNTLSDHSAIKLELRIKKLTQNRTTTWKLNNLLLNDYWVNNKIKAEINTFFETNEN
KDTMYQNLWDTVKAVFRGKFIALNAHKRKQERFKLDTLTSQLKELEKQEQTNSKATRRQE
ITKIRAELKETET

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_6|402_bp
atggaaatcataacgaacactctctcagaccacagtgcaatcaaattagaactcaggatt
aagaaactcactcaaaaccgcacaactacatggaaactgaacaacctgctcctgaatgac
tattgggtaaataacaaaattaaggcagaaataaatacattctttgaaaccaatgagaac
aaagacacaatgtaccagaatctctgggacacagtgaaagcagtgtttagagggaaattt
atagcactaaatgcccacaagagaaagcaggaaagatttaaactcgacaccctaacatca
caattaaaagaactagagaagcaagagcaaacaaattcaaaagctaccagaagacaagaa
ataactaagatcagagcagaactgaaggagacagagacatga

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_7|59_aa
MKQNRRRDRNAVSNEAVRIGNTEKVIFEQRSKENEGGCYHGKPSGTASGAAVLWRVSAK

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_7|180_bp
atgaaacagaacagaagaagggatagaaatgcagtttcaaatgaggcagtcaggatagga
aacaccgagaaggtgatatttgaacaaagatccaaagaaaatgagggaggctgctaccat
ggcaaaccttcaggaactgcctctggtgctgccgttctctggcgagtgtcggcgaagtag

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_8|112_aa
MASEEVGKSSSTEQLKRWQNCQVQPFQHSRNQPKAKKQTEKCLFKEICCITEAAEELKEQ
LRSVPLYSSYVHNTIRVVYSGIQHGLTLLKHLLSKAFQKGCLGKGGNGVGAV

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_8|339_bp
atggcaagtgaagaagttggcaaatcctcttccactgaacaactaaaaaggtggcaaaat
tgtcaagtacaaccatttcagcactccagaaatcaaccaaaagcaaaaaaacaaactgag
aaatgtttattcaaggaaatctgctgtattacagaggctgcagaagaactgaaggagcag
ctgaggtcagtgcctctttacagctcttatgttcacaacacaatcagagttgtttattct
ggcattcaacatggtctgactctgctgaaacatctcctttctaaggctttccagaagggc
tgtctaggaaaaggaggaaatggagttggtgctgtgtga

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_9|304_aa
MPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDVWRIPLGPLPHEFRGWIAPCRPRLG
ASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLAKELRQKRLSLGYSQ
ADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAENLLGLCKMEM
ILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSKM
GSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPVDIPHYTRLYSAGVAHSSAPATTLG
LLRF

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_9|915_bp
atgcccctgcgggttgacactctgacctggttgagcacccaggcggcccctggcagggtg
atggtctggccggcagtcaggccagggatctgcccaggccctgacgtgtggaggattccc
ctgggtcccctgccacacgaattccggggctggatagcaccctgcaggccccgtcttgga
gctagtgaggcaggggactggttgcgacgcccctccgaaggcgccctcccggggccctac
attgccctgcggagcattccgaagttgccgccgccagaggacatctcgggcatactgaaa
gagttgcagcaattggccaaggagttgaggcagaagaggttgagcctagggtactcgcag
gccgatgtggggatcgctgtgggagctctgtttgggaaggtgcttagccagacgaccatc
tgccgcttcgaggcccagcagctaagcgtcgccaacatgtggaagctgcgaccactgctg
aaaaagtggctgaaggaagtggaagcagagaaccttctgggcttatgcaaaatggagatg
atcctgcaacagtctgggaagtggagacgggcaagcagagagcgacgaatcggaaacagc
ctggagaaattcttccagcggtgccctaagcccacaccccagcaaatcagccacattgct
gggtgcctccagctgcagaaggatgtggttcgagtttggttctataaccgcagcaagatg
ggcagtcgaccaaccaatgatgcttccccacgggagattgtggggacagccgggcctcct
tgcccaggagcaccagtgtgctttcacctgggactggggctcccagtggatatcccccac
tatacacgtctctactctgcaggggtagcccactcctctgccccagccaccactctgggc
ctcctcagattttag

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_10|235_aa
MEDQMNEMKQEEKFRDKRVKRNEQSLQEIWDYVKRPNLCLIGVPESDMENGTKLENTLRD
IIQEKFPNLARQANIQIQEIQRTPQRYSWRRATPRHIIVRFTKVEMKEKMLRAAREKGWV
THKGKPIRLTADLLAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDK
QMLSDFVTNCPKRAPEGSTKHGKEQPVPATAKTCQIVKTIETRKKLHQLTSKITS

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_10|708_bp
atggaagatcaaatgaatgaaatgaagcaagaagagaagtttagagacaaaagagtaaaa
agaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctatgtctg
attggtgtacctgaaagtgatatggagaatggaacgaagttggaaaacactctgcgggat
attatccaagagaaattccccaatctagcaaggcaggccaacattcaaattcaggaaata
cagagaacgccacaaagatactcctggagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagagcagccagagagaaagggtgggtt
acccacaaagggaagcccatcagactaacagcggatctcttggcagaaactctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaag
caaatgctgagtgattttgtcaccaactgccctaaaagagctcctgaaggaagcactaaa
catggaaaggaacaaccagtaccagccactgcaaaaacatgccaaattgtaaagaccatc
gagactaggaagaaactgcatcaactaacgagcaaaataaccagctaa

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_11|117_aa
MSELPFTIASKRIKYLGIQLARDVKDLFKENYKPLLNEMKEDTNKWKNIPCSWVGRINIM
KMAIQPKVIYRFNAIPIKLPMTRIGKNYFKVHMEPKKSPHCQVNPTPKEQSWRHHTT

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_11|354_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
gcaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaatgaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaacatcatg
aaaatggccatacagcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccacat
tgccaagtcaatcctacgccaaaagaacaaagctggagacatcacactacctga

>gi568815593r:93582840_93783717|GENSCAN_predicted_peptide_12|127_aa
MDLKMFTGNKGKTGLPIEREELAHCDGNQLPGCKLPCGEAHMARNWYIRPKAREDLRSTN
SHTELATECNFSFPVGFCSNKFGLNQKEIVHTFPSTYPFITKVFIDIYCVPGTVLEAGDI
AVNKSSS

>gi568815593r:93582840_93783717|GENSCAN_predicted_CDS_12|384_bp
atggatctgaagatgttcacagggaacaaaggcaagactggactgcctattgaaagggaa
gagcttgctcactgtgatggaaaccagctgccaggttgtaagctgccctgtggagaggcc
cacatggcaaggaactggtatatcaggccaaaagccagggaggacctgaggtccaccaac
agccatacagaacttgctactgagtgtaacttttcattccctgtgggattttgttctaac
aaatttggcctaaatcagaaggaaattgtacatacattccccagcacatatccatttatc
actaaagtatttattgacatttactgtgttccaggcactgttctggaagctggagacata
gcagtgaacaagagctcatcatga