GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:28:25

Sequence gi568815593r:81909599_82110093 : 200495 bp : 38.89% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5864   5918   55  1  1   47  101    26 0.139   1.30
 1.02 Intr +  13548  13624   77  1  2   75   83    63 0.030   2.82
 1.03 Intr +  44338  44638  301  0  1   65   17   240 0.768   9.98
 1.04 Intr +  46660  46781  122  2  2   80   92    28 0.835   1.69
 1.05 Term +  46948  47769  822  0  0   51   43   259 0.836   9.80
 1.06 PlyA +  49575  49580    6                               1.05

 2.00 Prom +  69253  69292   40                              -4.55
 2.01 Init +  77973  78080  108  2  0   57  116    43 0.313   4.27
 2.02 Term +  87406  87783  378  0  0   23   51   217 0.128   5.30
 2.03 PlyA +  88041  88046    6                               1.05

 3.02 PlyA -  96472  96467    6                               1.05
 3.01 Sngl - 100495  99998  498  1  0   76   38   476 0.999  37.19
 3.00 Prom - 101281 101242   40                              -6.25

 4.02 PlyA - 101323 101318    6                               1.05
 4.01 Sngl - 105989 105441  549  2  0   59   54   233 0.920  12.86
 4.00 Prom - 107420 107381   40                              -5.45

 5.00 Prom + 108329 108368   40                              -9.75
 5.01 Init + 110364 110672  309  2  0   65   19   242 0.179  10.66
 5.02 Term + 118238 118339  102  1  0   89   47   100 0.392   3.30
 5.03 PlyA + 118419 118424    6                               1.05

 6.00 Prom + 119939 119978   40                              -9.05
 6.01 Init + 120526 120696  171  0  0   68   23   184 0.732   9.39
 6.02 Term + 122228 122350  123  1  0   93   43    73 0.649   0.70
 6.03 PlyA + 123597 123602    6                               1.05

 7.03 PlyA - 125074 125069    6                               1.05
 7.02 Term - 133690 133071  620  2  2   47   39   319 0.144  16.51
 7.01 Init - 138872 138704  169  2  1   21   86   122 0.302   5.04
 7.00 Prom - 141995 141956   40                              -4.75

 8.00 Prom + 149696 149735   40                              -2.55
 8.01 Init + 174268 174627  360  0  0   79   31   463 0.681  36.82
 8.02 Term + 174664 175308  645  0  0  -82   49   303 0.566   2.53
 8.03 PlyA + 175520 175525    6                               1.05

 9.02 PlyA - 176215 176210    6                               1.05
 9.01 Sngl - 191066 190806  261  2  0   40   49   189 0.752   5.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_1|458_aa
MNSSATIEKVERSVRKEDGPYSAVSCLGQFLVKLGTWMDARQLRRQRRHVLSVDPKPQRW
SRTREGRDASLIIHPGFRGVRPRRDACLGPSPLAASPAFLGEGQVLQPLLSVSLPLLRLS
GGQETPNPFSFTLSGKSRFSGEGATCFERIKACYHSPATAWPFKAYKLSLQFPHFTCPKT
RQDWQPLFTFTWTDPDTHQAQQLTWAVLPQDFKDSPHYFSQVLSQVSPSKAQISSPSVTY
LGIILHKNTRALPVDLVRLISQTPTPSTKQQLLSFLGIVRYFRLWIPGFTILTKPLYKLT
KGNLADPVDPKYFPHSSFRSLKTALETAPTLALPDSSQPFSLHTAKVQGCTVRILIQGPG
SRPVAFLSKQLDLTVLGWPPCLRAAAAAALILSEALKITNYAQLTLYISHNFQNLFSSSY
LMHILSAPWLLQLNSLFVKSHNYHCSWPGLQSGLPHYS

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_1|1377_bp
atgaatagtagtgcaacaatagagaaagtggagagatcagttagaaaggaagatggtccc
tacagtgcagtttcctgccttggacagttcctggtcaaactggggacttggatggatgcc
aggcagctgaggagacaaaggagacatgttttatccgtggacccaaaaccccagcgctgg
tcacggactcgggaaggcagggacgcctctctgattattcacccaggtttcagaggtgtc
agaccacgcagggatgcctgccttggtccttcacccttagcggcaagtcccgcttttctg
ggggaggggcaagtactccaaccccttctctccgtgtctctaccccttctccgcctttct
gggggacaagaaacccccaaccccttctccttcacccttagcggcaagtcccgcttttct
ggggaaggggcaacatgctttgaaaggattaaagcctgttaccactcgcctgctacagca
tggccttttaaagcctataaactctccttacaattcccccattttacctgtcctaaaacc
agacaagactggcagcctctcttcactttcacttggactgaccctgacacccatcaggct
cagcagcttacctgggctgtgctgccacaagatttcaaggacagccctcattacttcagc
caagttctttctcaagtatccccctccaaagctcaaatttcttctccatccgttacctac
ctcggcataattcttcataaaaacacacgtgctctccctgtcgatcttgtccgactgatc
tctcaaaccccaaccccttctacaaaacaacaactgctttccttcctaggcatagttaga
tactttcgcctttggatacctggtttcaccatcctaacaaaaccattatataaactcaca
aaaggaaacctagctgaccccgtagatcctaaatactttccccactcctctttccgttcc
ttgaagacagctttagagactgcccccactctagctctccctgattcatcccaacccttt
tcattacacacagccaaagtgcagggctgtacagtcagaattcttatacaaggaccagga
tcgcgtcctgtagcctttttgtccaaacaacttgaccttactgttttaggttggccacca
tgtctccgagcagcggctgctgctgccctaatactttcagaggccctcaaaatcacaaac
tatgctcaacttactctctatatttctcataacttccaaaatctattttcttcctcatac
ctgatgcatatactttctgctccctggctccttcagctgaactcactcttcgttaagtcc
cacaattaccattgttcctggcctggacttcaatccggcctcccacattattcctga

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_2|161_aa
MEEDEFIGEKTFQRYCAEFIKHSQQIGDSWEWRPSKHPSDTSAGAHTHMDASDPTPSPCA
TIVNIHMEAISPAPSSPQPHLTSMHPATLLLLLVRANEHRSHCHRPTKDFGWHHPLECCG
QWSGNTLAPPVQQVHNLVGPENKAEGPIPNPSELEHTAQEG

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_2|486_bp
atggaagaagatgagttcattggagaaaaaacattccaacgttattgtgcagaattcatt
aaacattcacaacagataggtgatagttgggaatggagaccatcaaagcatccctctgac
accagtgctggtgcacacacacacatggatgccagtgaccctaccccctcaccctgtgcc
accattgtgaacattcacatggaggccatcagccctgcaccctccagtccccagccacat
ctaacaagtatgcaccctgccacactgctgttgctactagtacgtgcaaatgaacacaga
tcccactgccaccgcccaacgaaggactttggttggcatcacccattggagtgttgtggc
cagtggtctgggaacaccttggctcctccagtgcagcaggttcataaccttgtggggcca
gagaacaaagctgagggcccaatacccaacccctcagaattagagcacacagctcaggag
ggctga

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_3|165_aa
MVNPTVFFDIAVDGEPLGRVSFELLADKVPKTAENFHALSTGEKGFGYKGSCFHRIIPGF
MCQGGDFTRHNGTSGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
WLDGMHVICGKVKEGMNIVEVMECFGSRNGKTSKKITIADCGQLE

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_3|498_bp
atggtcaaccccaccgtgttcttcgacattgccgtcgatggcgagcccttgggccgcgtc
tcctttgagctgttagctgacaaggtcccaaagacagcagaaaattttcatgctctgagc
actggagagaaaggatttggttataagggttcctgctttcacagaattattccagggttt
atgtgtcagggtggtgacttcacacgccataatggcactagtggcaagtccatctatggg
gagaaatttgaagatgagaacttcatcctaaagcatacaggtcctggcatcttgtccatg
gcaaatgctggacccaacacaaatggctcccagtttttcatctgcactgccaagactgag
tggttggatggcatgcatgtgatctgtggcaaagtgaaagaaggcatgaatattgtggag
gtcatggagtgctttgggtccaggaatggcaagaccagcaagaagatcaccattgctgac
tgtggacaactcgaataa

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_4|182_aa
MEDQMNELKREEKFREKRIKRHEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRMPQRYSSRRATPQHIIVRFTKVEMKEKILRAARQKGRV
THKGKPIRLTVDLSAETLQARREWRPIFNILKEENFQPRITYPAKLSFISEGEINTLQTS
KC

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_4|549_bp
atggaagatcaaatgaatgaattgaagcgagaagagaagtttagagaaaaaagaataaaa
agacacgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
ataggtgtacctgaaagtgacggggagaatggaaccaagctggaaaacactcttcaggat
attatccaggagaacttccccaacctagcaaggcaggccaatattcaaattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccacaacacatcattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatattaagggcagccagacagaaaggtcgggtt
acccacaaagggaagcccatcagactaacagtggatctctcagcagaaactctacaagcc
aggagagagtggaggccaatattcaacattcttaaagaagagaatttccaacccagaatc
acatatccagccaaactaagcttcataagtgaaggagaaataaatactttacagacaagc
aaatgctga

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_5|136_aa
MVTAWIREVCQGLVSLQAPLKRPCSHPMGELAAVCLPRGEILTTRECHRSNSKQEEDCDC
IQLNQSMSLLPVFKPWAPRSSEGQEAFLSKSMLHFEKLIQAAEPKCLTGKEKLRVEDKVP
SKLHWHLTTKTQQEKI

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_5|411_bp
atggtgactgcctggattagggaagtgtgccaggggttggtctccctgcaggcgcctctg
aagcgcccatgcagtcaccccatgggggagttagcagctgtgtgtctgccacgtggagag
atattgacaaccagggagtgtcacagaagcaacagcaaacaagaagaggactgtgactgc
atccagttaaaccagtcgatgtccctccttccagtttttaagccatgggctcctagaagt
agtgaggggcaggaggcttttctgagtaagagcatgcttcattttgagaagcttattcaa
gctgctgagcctaaatgccttactggcaaggaaaagttacgagttgaagacaaggtgcca
agcaaactgcactggcacctcactacaaaaactcagcaggaaaagatttga

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_6|97_aa
MDATYSRASSRTVTWVFLGFIAVVCGKAEEYGLILKCSGRIFSLQQPIIYVAVLKNMNVV
SQKSCYLYLQIVLTILPVGNTVWKESELYFGLDLEQL

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_6|294_bp
atggatgctacatacagtagggcctcttcacggactgtgacttgggtgtttctgggcttc
atcgcagttgtttgtgggaaagctgaagaatatggtctgatcttaaaatgttctgggaga
atatttagtctgcagcagcccatcatctatgtagctgtgcttaagaatatgaatgtagtc
agtcagaagtcatgctacttgtacctccaaattgtgctaactattctacctgttggcaac
actgtatggaaagaatctgagctgtattttggcttagatttggagcaactatag

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_7|262_aa
MVKIPRNPTYKGCEGPLQGELQTTAQGNKRGYKQMEEHSMLMGRKNQYRENGHTAQAAPA
VAKRGHGTARATASEGANPKPWQLPCGIGPAGVQKARIEVWEPTPRFQRMYGNAYMSRQK
SAAGVEPSWRASTRAVQRENVGLEPLHRVPTGALSSGPVRKGPLSSIHQKGRSTKSLHHA
PGKAVGTQNQPGKAAMGAVSCRATEAELPKPMGAHPLHQHAQDMRHGVKGDYFGALRFND
CPAGFQTCMGTVAPLFWPMSPI

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_7|789_bp
atggtaaaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaa
ctacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatg
ctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaagctgctccagct
gtggctaaaaggggccatggtacagctagggccacggcttcagagggtgcaaatcccaag
ccttggcagcttccatgtggtattgggcctgcaggtgtgcagaaggcaagaattgaggtt
tgggaacctacacctagatttcagaggatgtatggaaatgcctatatgtccaggcagaag
tctgctgcaggggtggagccctcatggagagcctctactagggcagtgcagagggaaaat
gtggggttggagcccctacacagagtccccactggagcactgtcaagtggacctgtgaga
aaagggccactgtcctccatacatcagaaaggtagatccaccaagagcttgcaccatgca
cctggaaaagctgtaggcactcaaaaccagccggggaaagcagccatgggagctgtatcc
tgcagagccacagaggcggagctgcccaaacccatgggagcccaccccttgcatcagcat
gcccaggatatgagacatggagtcaaaggagattattttggagctttaagatttaatgac
tgccctgctgggtttcagacttgcatggggactgtagcccctttgttttggccaatgtct
cccatttag

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_8|334_aa
MQRNKSRKAENSKNQNTSSPPKECSSLPATEQSWMENDYDALREEGFRRSVITDFSELKE
DVRTHHKEAKNLEKRLDEWLTRINSVEKSLNDLMDLKTMARELRDACTSFSSQSDQVEER
QEEKFRVKRVKRNKQSLQEIWNYVKIPNLRLIGVPESDRENGTKLGNTLQDIIQENFPNL
ARQANIQIEEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTHKGKPIRL
TADLSAETLQARREWGTVFNILKEKNFQPRISYPAKLSFISEGEIKSITDKQMLRDFVTT
RPALQEPLKEALNMERNNGTSHCQNMPNCKDHQC

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_8|1005_bp
atgcagagaaacaagagcagaaaagctgaaaattctaaaaatcagaacacctcttctcct
ccaaaggaatgcagctccttgccagcaacggaacaaagctggatggagaatgactatgac
gcgttgagagaagaaggcttcagacgatcggtaataacagacttctctgagctaaaagag
gatgttcgaacccatcacaaagaagctaaaaacctggaaaaaagattagacgaatggcta
actagaataaacagtgtagagaaatccttaaatgacctgatggacctgaaaaccatggca
cgagagctacgtgatgcatgcacaagcttcagtagccaatctgatcaagtggaagaaagg
caagaagagaagtttagagtaaaaagagtaaaaagaaacaaacaaagcctccaagaaata
tggaactatgtgaaaataccaaatctacgtctgattggtgtacctgaaagtgacagggag
aatggaaccaagttgggaaacactcttcaggatattatccaggagaacttccccaaccta
gcaaggcaggccaacattcaaattgaggaaatacaaagaacgccacaaagatactcatca
agaagagcaactccaagacacatcattgtcagattcaccaaagttgaaatgaaggaaaaa
atgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagacta
acagcggatctctcggcagaaactctacaagccagaagagagtgggggacggtattcaac
attcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcata
agtgaaggagaaataaaatccattacagacaagcaaatgttgagagattttgtcaccacc
aggcctgccttacaagagcccctgaaggaagcattaaacatggaaaggaacaacggtacc
agccactgccaaaacatgccaaattgtaaagaccatcaatgctag

>gi568815593r:81909599_82110093|GENSCAN_predicted_peptide_9|86_aa
MIKAKDRALLLPRSTLKISLLVGKKQMMNALGMLVQPPLNSQRSFSLSKNSGANYWAMGS
PAGGAQEATFPNYYHLERDWQYELTQ

>gi568815593r:81909599_82110093|GENSCAN_predicted_CDS_9|261_bp
atgatcaaggcaaaagacagagcccttcttttgcccagatctacactgaagatctctctc
ctagtgggcaagaagcaaatgatgaatgctctggggatgctagttcaaccacctctgaat
tcccaaagatctttttctctttctaagaattcaggggccaactactgggccatgggaagc
ccagcaggtggagctcaggaagccaccttccccaactactaccacctagagagagactgg
cagtatgagctgacacagtga