GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:22:09

Sequence gi568815593r:16802297_17002641 : 200345 bp : 44.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   3264   3396  133  0  1   31   36   181 0.612   4.76
 1.02 PlyA +   4663   4668    6                               1.05

 2.09 PlyA -   4818   4813    6                               1.05
 2.08 Term -  11581  11573    9  1  0  115   41     0 0.156  -3.81
 2.07 Intr -  15871  15713  159  1  0  133   92   184 0.957  23.48
 2.06 Intr -  27070  27021   50  2  2   88   80    53 0.023   2.90
 2.05 Intr -  44369  44140  230  1  2   55   36   166 0.090   5.61
 2.04 Intr -  45667  45654   14  1  2  112   84    -9 0.003  -5.32
 2.03 Intr -  57841  57812   30  1  0   93   62    51 0.013   1.33
 2.02 Intr -  75411  75313   99  0  0  116   94   108 0.957  14.51
 2.01 Init -  76340  76335    6  2  0   49   86    10 0.619  -2.79
 2.00 Prom -  84084  84045   40                              -5.26

 3.00 Prom +  84263  84302   40                              -6.26
 3.01 Init +  90161  90163    3  1  0  108   81     0 0.654   1.30
 3.02 Intr +  91927  92004   78  0  0  109   66    32 0.436   2.85
 3.03 Intr +  93249  93276   28  2  1  103   95   -15 0.418  -1.61
 3.04 Intr +  98893  99030  138  2  0   83   50   107 0.512   6.84
 3.05 Term +  99083  99225  143  0  2   73   42    72 0.542  -0.81
 3.06 PlyA +  99341  99346    6                               1.05

 4.10 PlyA -  99746  99741    6                               1.05
 4.09 Term - 100345 100046  300  1  0   36   34   370 0.182  21.62
 4.08 Intr - 103301 103218   84  2  0   84   96     3 0.012   0.72
 4.07 Intr - 118975 118922   54  1  0   68   94    42 0.085   1.98
 4.06 Intr - 131991 131876  116  1  2   59   97    58 0.124   3.97
 4.05 Intr - 151289 151211   79  2  1   29   68    59 0.002  -2.88
 4.04 Intr - 155695 155609   87  1  0   95   52    34 0.041   0.67
 4.03 Intr - 169632 169522  111  0  0   72   61    81 0.474   4.38
 4.02 Intr - 169811 169732   80  0  2  121   80    12 0.186   2.97
 4.01 Init - 188800 188596  205  1  1   92   44    91 0.003   4.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  34156  34294  139  1  1   74   48   177 0.951   9.74
S.002 Term + 184204 184320  117  0  0  109   48   124 0.992   9.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:16802297_17002641|GENSCAN_predicted_peptide_1|44_aa
XYCYRSTNGHDDAMQFKTVDTCSSQTRGGATYRFPHVGFQIPQE

>gi568815593r:16802297_17002641|GENSCAN_predicted_CDS_1|135_bp
nnatattgttaccgctccacaaacggccatgatgatgccatgcagtttaagactgtggac
acatgcagctcccaaacacgaggtggggccacgtaccggtttcctcatgttggatttcaa
attccacaagaataa

>gi568815593r:16802297_17002641|GENSCAN_predicted_peptide_2|198_aa
MKGTRVWLRENGQHFPSTVNSCAEGIVVFRTDYGQNPVIGRFFHVAITCMQSLHNDDDDL
SHLLLPNMLIMDLFVATLLLNRFQLFLTAKNQDNIAFESESVKPALFHGDQNLGEFLFMI
VDFAGPESLGAVFDVSVAHDDEQVFTYKQSTITHQKVTAMHPTNEEGVDDMASLTELHGG
SIMYNLFQRYKRNQIYCQ

>gi568815593r:16802297_17002641|GENSCAN_predicted_CDS_2|597_bp
atgaagggaacacgggtctggctgagagaaaatggccagcattttccaagtactgtaaat
tcctgtgcagaaggcatcgtcgtcttccggacagactatggtcagaacccagtgattggc
cgcttcttccacgttgctatcacttgcatgcagtccctgcacaacgatgatgatgacctt
tcccaccttttgctaccaaacatgctaattatggacctgtttgtggccaccctccttctc
aaccggtttcaactatttttgacagcaaagaatcaagataatatagcctttgaaagtgaa
tcagtgaagcctgcgctctttcatggtgaccaaaatctgggagaatttctttttatgatt
gtagactttgcgggcccagaaagtctcggtgctgtgtttgatgttagtgttgcccatgat
gatgagcaggtattcacttacaagcagagcacaattacccaccagaaggtgactgctatg
caccccacgaacgaggagggcgtggatgacatggcgtccttgacagagctccatggcggc
tccatcatgtataacttattccagcggtataagagaaatcaaatatattgccagtaa

>gi568815593r:16802297_17002641|GENSCAN_predicted_peptide_3|129_aa
MDPFWDIGCNRHAPSLIALTVLRNAGQEASHLLRTNACCFASNTNASSGFGIHIHYLLSE
ALAGLLGAPPPSVSLLHVPLSPAHKVVPSKEGRKEDFQQPKNLVNFSINSTHLETLPEER
ICLLPALPY

>gi568815593r:16802297_17002641|GENSCAN_predicted_CDS_3|390_bp
atggaccccttctgggacattggatgtaatcgtcatgctccttctttgatagccttgacg
gttttgagaaatgctggtcaggaagcctctcacctcctgaggaccaatgcctgttgcttt
gccagcaacaccaatgcatcctctggcttcggcattcacatacattacctcctctcagag
gccctcgctggcctgctgggcgcccctcctccgtcagtcagcttgctgcatgtacctttg
tccccagcacacaaggtggtgcccagcaaagaaggcaggaaggaggatttccaacaaccc
aagaacctggtgaacttcagtataaactccacccatctggaaactttgccagaagagcgt
atttgtctcttaccagccctgccctattaa

>gi568815593r:16802297_17002641|GENSCAN_predicted_peptide_4|371_aa
MPEPPFSSVGSCVAGASRRNAAPCSTVPSPIDHPRAEECWHRAQDWQAAPPAAPVRDPLG
EASWAPQSGTFTNWLTNHEHLFNIARGPPTPVNCQRSILSSNILDRCSPSVCAYIQCYQG
SLSWHSAGLVLIVSRILPPTPMPPECRGERNTANIGKLNLKIPAKLIRTFPIYIILCAYS
NASAKTTACLSTTGVRGSPLGRTLPPSASGGNIRITRYSVLISCYPEKGRILSQSFEGMS
SYVKHSSVSGGLRWTHCPGWLAGWWLFLQDGRMTKKRRNNGRAKKGRGHVQPIRCTNCAR
CVPKDKAIKKFVIRNIVEAAAVRDMSEASVFDAYVLPKLYVKLHYCLSCAVLSKVVRNRS
REARKDRTPPP

>gi568815593r:16802297_17002641|GENSCAN_predicted_CDS_4|1116_bp
atgcctgagcctcccttctcctccgtgggctcctgtgtggccggagcctcccggaggaat
gccgccccctgctccaccgtgcccagtcccatcgaccacccaagggctgaggagtgctgg
cacagggcgcaggactggcaggcagctccacctgcggccccagtgcgggatccactgggt
gaagccagctgggctcctcagtctggcacctttaccaattggttgaccaatcatgagcac
ctttttaatatagcccgaggccctcccacacctgtgaactgtcagcgcagcattctctct
agcaacatcctcgaccgctgctcacccagcgtctgcgcctatatccagtgctaccagggt
agcctgtcctggcactcagcgggcttagttcttattgtctcaagaatcctcccgcctact
ccaatgcccccagaatgcaggggggagcgtaacacagctaacattggaaagctgaatctt
aagattcctgcaaaactcatcaggacttttcccatttacatcattctctgcgcttactcg
aatgccagtgccaagaccacagcctgtctgagcaccacaggggtccgtggctcccccttg
gggagaactctgccccctagtgcaagtggggggaacatcaggataacgcgctacagcgtc
ctgatctcctgttacccggaaaaaggtcgtattctctcgcaaagctttgagggcatgtca
agttatgtcaagcactcatcggtcagtggaggtctgagatggactcattgccctggctgg
ctggctggctggtggctgttcctgcaggacgggaggatgacaaagaaaagaaggaacaat
ggtcgtgccaaaaagggccgcggccacgtgcagcctattcgctgcactaactgtgcccga
tgcgtgcccaaggacaaggccatcaagaaattcgtcattcgaaacatagtggaggccgca
gcagtcagggacatgtctgaagcgagcgtcttcgatgcctatgtgcttcccaagctgtat
gtgaagttacattactgtctgagttgtgcagttctcagcaaagtagtcaggaatcgatct
cgtgaagcccgcaaggaccgaacacccccaccctga