GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:59:05

Sequence gi568815593r:135474571_135678814 : 204244 bp : 45.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    103     98    6                               1.05
 1.03 Term -   7942   7790  153  1  0  101   41   117 0.747   6.22
 1.02 Intr -  11873  11800   74  0  2   79   -6    52 0.103  -5.97
 1.01 Init -  12450  12408   43  0  1   81  102    49 0.652   6.18
 1.00 Prom -  15069  15030   40                              -4.46

 2.05 PlyA -  15445  15440    6                              -0.45
 2.04 Term -  16203  16026  178  2  1   66   49   186 0.931   9.66
 2.03 Intr -  17902  17798  105  0  0   48   57   107 0.788   2.93
 2.02 Intr -  29801  29717   85  0  1   85   87     4 0.068  -1.12
 2.01 Init -  35546  35471   76  2  1   90   48   101 0.476   7.55
 2.00 Prom -  36843  36804   40                              -3.16

 3.04 PlyA -  40143  40138    6                               1.05
 3.03 Term -  43012  42978   35  2  2  116   48    19 0.383  -1.55
 3.02 Intr -  54289  54182  108  2  0   39  119   102 0.369   8.66
 3.01 Init -  57538  57466   73  1  1   58   36    88 0.288   1.83
 3.00 Prom -  59552  59513   40                              -5.56

 4.02 PlyA -  59578  59573    6                               1.05
 4.01 Sngl -  61120  60407  714  1  0   85   47   978 0.664  89.63
 4.00 Prom -  66986  66947   40                              -5.86

 5.03 PlyA -  67523  67518    6                               1.05
 5.02 Term -  72963  72785  179  1  2  100   47   111 0.874   6.05
 5.01 Init -  75901  75760  142  1  1   88   93     9 0.200   1.76
 5.00 Prom -  80317  80278   40                              -5.56

 6.07 PlyA -  80327  80322    6                               1.05
 6.06 Term -  81203  81100  104  0  2   49   45   126 0.432   2.84
 6.05 Intr -  84209  84129   81  0  0   64   98    49 0.177   3.11
 6.04 Intr -  97841  97759   83  1  2  128   80   -30 0.309  -0.52
 6.03 Intr - 100115 100002  114  1  0  104  101   241 0.981  26.56
 6.02 Intr - 103969 103864  106  2  1   80   73   236 0.998  20.57
 6.01 Init - 104208 104145   64  0  1   88  113   240 0.681  25.81
 6.00 Prom - 107413 107374   40                              -7.76

 7.12 PlyA - 107661 107656    6                               1.05
 7.11 Term - 114079 113839  241  0  1   95   44   133 0.763   5.10
 7.10 Intr - 117051 116971   81  2  0   68   94    51 0.352   2.45
 7.09 Intr - 120301 120201  101  1  2   95   41    41 0.247  -0.99
 7.08 Intr - 131089 130998   92  2  2   34  121    18 0.129  -0.59
 7.07 Intr - 131684 131625   60  0  0   50  121    40 0.016   2.21
 7.06 Intr - 152444 152363   82  2  1  108   98    35 0.109   5.71
 7.05 Intr - 156542 156392  151  1  1   61   42    94 0.075   2.26
 7.04 Intr - 185063 184909  155  2  2    4   58   136 0.022   1.07
 7.03 Intr - 186296 186192  105  2  0   47   91    67 0.026   3.31
 7.02 Intr - 194848 194709  140  2  2  104   69    52 0.895   5.08
 7.01 Init - 196774 196684   91  1  1  120   41    15 0.722   0.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  65816  65998  183  1  0   68   54   128 0.839   4.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_1|89_aa
MGVPSAPPPFFTDEDQLPSFDPPRWDSSTVLEEPVALTQLSRDDDSDDSNSHIDLGSLPL
HPALPLKISVSDQTTSSHPEELITIAGPK

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_1|270_bp
atgggtgttccttcagcccctccacccttcttcacggatgaagaccagctgccttccttt
gacccaccaagatgggactcctccacagtcctggaagagcctgtggccttgacccaactg
agcagagatgatgacagtgatgatagtaacagccacattgacctaggcagtcttcccctc
cacccggccttgcctctgaagatctcagtatctgatcagacaaccagttctcaccctgaa
gagctgatcacaattgcaggccccaagtga

>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_2|147_aa
MTVDTAEFFPSDPISPSNKDDHTAEGYSFFHPPSTGLLQLLLWKCPDSLSTSQLSSSPNQ
QQVLPEHYFMLQPYPQEPSFINHTTMPDGPPIASRAPAACGDGKGPGPELEVEAAWPQLA
KTAPTLASFTGASSSLSLESRGPDIVF

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_2|444_bp
atgacggtggacacagctgagttcttcccatcagatcctatcagccccagtaacaaggat
gaccatactgcagaagggtatagctttttccacccaccctcaacagggcttctccagctg
ctgctctggaagtgtcctgacagcctcagcacatcacagctgtccagtagccctaaccag
caacaagtgttgcctgaacactacttcatgctccagccctacccgcaggagcccagtttc
atcaaccacacaaccatgccagatgggccgcccatcgcgtccagagcacctgctgcgtgc
ggcgacgggaaaggccccggccctgaactggaggtggaggcggcttggccacagctggct
aagaccgcgcctacgctggcatcttttactggagcttcttcctcgctcagcctggagtct
agaggtcccgacatcgtcttctga

>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_3|71_aa
MYDPEHLSRTQSTFPKRNVFNNIVENMYAVAPTSAKQGIKAAKFNTKETNGEDFSTEDAP
GPSSKYSHIRS

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_3|216_bp
atgtatgacccagagcacctttccaggacccagagcacctttccaaaaagaaacgtcttt
aacaacatcgttgaaaatatgtatgcagttgctccaacctcagccaagcagggaatcaag
gctgcaaagttcaacaccaaagagaccaatggtgaagattttagcacagaagatgctcct
ggcccgagctccaaatacagccacattaggagttag

>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_4|237_aa
MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASE
VPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLP
SFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPA
SDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDPVFSFPSLPKDLLHTTPCFIPYH

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_4|714_bp
atgccagcccgccttgagacctgcatctccgacctcgactgcgccagcagcagcggcagt
gacctatccggcttcctcaccgacgaggaagactgtgccagactccaacaggcagcctcc
gcttcggggccgcccgcgccggcccgcaggggcgcgcccaatatctcccgggcgtctgag
gttccaggggcacaggacgacgagcaggagaggcggcggcgccgcggccggacgcgggtc
cgctccgaggcgctgctgcactcgctgcgcaggagccggcgcgtcaaggccaacgatcgc
gagcgcaaccgcatgcacaacttgaacgcggccctggacgcactgcgcagcgtgctgccc
tcgttccccgacgacaccaagctcaccaaaatcgagacgctgcgcttcgcctacaactac
atctgggctctggccgagacactgcgcctggcggatcaagggctgcccggaggcggtgcc
cgggagcgcctcctgccgccgcagtgcgtcccctgcctgcccggtcccccaagccccgcc
agcgacgcggagtcctggggctcaggtgccgccgccgcctccccgctctctgaccccagt
agcccagccgcctccgaagacttcacctaccgccccggcgaccctgttttctccttccca
agcctgcccaaagacttgctccacacaacgccctgtttcattccttaccactag

>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_5|106_aa
MEVRSQVAFLKASSRPLAADAVTQVCPALSHCSVPSHSEEALLFPGPGEEELCMCTHVSM
HVSTHAGMNTWCPCTNPFPPQISLERQLYSKDMNDDGDDDEVKKRD

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_5|321_bp
atggaggtgcgctcacaagtggctttccttaaagccagttccaggcctcttgctgctgat
gctgtgacccaggtgtgccccgcactcagccactgctctgtgccctctcactctgaggag
gccctcctcttccctggccctggtgaggaagagctatgtatgtgcacgcatgtatccatg
catgtcagcacccatgcaggcatgaacacctggtgcccatgcacaaatccattccctcca
caaatatcccttgagcgtcaactatactcaaaggatatgaatgatgatggtgatgatgat
gaagtcaagaagagggactga

>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_6|183_aa
MRLLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITT
KSVSRYRGQEHCLHPKLQSTKRFIKWYNAWNEKRRKQLLELAFFWRTCIIWAKYKEIYKP
KSRVYPQGRLSVEEIDSCMEMFTEASFTTASYKIPDQYSSKLSQSSKTEKARNFDSQEEP
EET

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_6|552_bp
atgaggctcctggcggccgcgctgctcctgctgctgctggcgctgtacaccgcgcgtgtg
gacgggtccaaatgcaagtgctcccggaagggacccaagatccgctacagcgacgtgaag
aagctggaaatgaagccaaagtacccgcactgcgaggagaagatggttatcatcaccacc
aagagcgtgtccaggtaccgaggtcaggagcactgcctgcaccccaagctgcagagcacc
aagcgcttcatcaagtggtacaacgcctggaacgagaagcgcaggaagcagcttctagag
ctagcattcttctggaggacatgcattatttgggcaaaatacaaagaaatatacaagcct
aagtcaagagtctatcctcagggaagactttcagtggaagaaattgatagctgcatggag
atgttcactgaagcatcatttaccacagcatcctacaaaatacctgaccagtactcctca
aaactgtcacagtcatcaaaaacagagaaagccagaaacttcgacagccaagaggagcct
gaggagacatga

>gi568815593r:135474571_135678814|GENSCAN_predicted_peptide_7|432_aa
MASLLESLLHKGKKASTVSTSLSVTNFPAPDRCFLASLPNKQLAHKSFSQSLLVGEPKKA
APIQKCPFPPPGPRASPSVGCGPAAAAPGDLLDMQHLRPQLLNQKLHFNKTQQCENRLIQ
ENWYQKGGIAIKIPENVKATLELDNEQRLEDFGGLRRRQEDEERKNVHASNSRLSAGSSG
SMQEDKDSKALAYSMSSIWSNSVEMMLPASNKAQAPTSCAKPGHKWGYFYGSVARRQPAG
QDSLATQTTSLTMQTFYVEEKEWPNSQQESQAVVEVVKKMLNVLISEKQVPKEDKKAYLS
LCVKVLFMLSNAMHRRDLGTLQAVMPLFEEKQWELRRLEQALQKKAGYMEHSRSISTTCF
MKAFPIPNLDGTALQPPIWNPRIRNSFEVFSQPAGKGLSGLQTSCRASGPQPPQPCNPGT
EQALSKGSTWCL

>gi568815593r:135474571_135678814|GENSCAN_predicted_CDS_7|1299_bp
atggccagccttctagagagcctgctacataaaggaaaaaaggctagcacagtgtccacc
agcttatcagtgacaaacttcccagctccagataggtgcttcctggcatcacttcccaat
aagcaacttgcacacaaatccttctctcagagtctgctggtgggagaacccaagaaggca
gcccctatccagaagtgtcctttcccacctccaggccccagagcatctcctagtgtgggc
tgtggaccagcagcagcagcacccggggacttgttagacatgcagcatctcagaccccaa
ctgctgaatcagaagctgcattttaacaagacccagcagtgtgagaacagactaatacaa
gaaaattggtaccagaaagggggcattgctataaagatacctgaaaatgtcaaagcaact
ttggaactggataatgagcagaggttggaagactttggagggctcagaagaagacaggaa
gatgaggaaaggaaaaatgtacatgcatctaactcgaggctttctgctggaagttcaggg
tcgatgcaggaagacaaggactcaaaggctttggcatattccatgtcttctatctggtcc
aacagtgtagagatgatgctgccagcttcaaacaaggcccaggctcccacctcctgtgcc
aagccaggccataagtggggctacttctatgggtctgttgcaagaaggcaaccagcaggc
caagatagccttgcaacccagaccacctccctgacaatgcagacattttatgtggaagaa
aaagaatggccaaattcccagcaagaaagtcaggcagtggtagaggtagtgaagaagatg
ttaaatgttctcatttctgaaaagcaagtacctaaggaagacaaaaaggcttacctgagc
ctgtgtgtgaaggtgctcttcatgctgtcaaatgctatgcataggagggatctgggcacc
ctccaagcagtgatgccgctgtttgaggaaaagcaatgggagctgcgtaggctggagcaa
gcgctgcagaagaaagcaggatacatggaacactccaggtctatttccactacctgcttc
atgaaagcattcccaatccccaacctggatgggactgccttacagccccccatctggaat
cctcgcatccgtaactcatttgaagtattctctcagcctgctggcaagggcctctctggc
ctgcagacatcctgccgagcctctggcccgcagcccccgcagccctgcaaccccggcaca
gagcaggcactcagcaagggctcaacttggtgtttatag