GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:32:17

Sequence gi568815593r:126444968_126695114 : 250147 bp : 42.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6011   6223  213  2  0   33   55   173 0.172   5.41
 1.02 Intr +  20459  20578  120  2  0  104  115   108 0.848  13.79
 1.03 Intr +  24710  24821  112  2  1   58   91   116 0.919   8.36
 1.04 Intr +  32725  32820   96  0  0   75   96    88 0.745   7.59
 1.05 Intr +  35489  35560   72  1  0   98   81    15 0.581   0.48
 1.06 Intr +  35660  35740   81  1  0   52  119   121 0.999  10.52
 1.07 Intr +  38496  38607  112  2  1  111   20   101 0.940   4.63
 1.08 Intr +  41794  42010  217  2  1    0   43   177 0.599   1.04
 1.09 Intr +  43832  43925   94  2  1  132   55    56 0.825   5.75
 1.10 Intr +  44580  44703  124  2  1   73   84    61 0.615   3.44
 1.11 Term +  54770  55008  239  0  2   -4   39   203 0.345   1.55
 1.12 PlyA +  55867  55872    6                               1.05

 2.00 Prom +  56272  56311   40                              -4.05
 2.01 Init +  56630  56684   55  1  1   75   79    60 0.707   5.30
 2.02 Term +  57410  57537  128  0  2   31   48   104 0.290  -1.84
 2.03 PlyA +  59259  59264    6                               1.05

 3.21 PlyA -  60113  60108    6                               1.05
 3.20 Term -  63976  63765  212  2  2   54   38   190 0.402   7.07
 3.19 Intr -  81229  81076  154  1  1   71   57   101 0.214   4.02
 3.18 Intr -  92858  92738  121  1  1   36   55    42 0.003  -4.72
 3.17 Intr - 101432 101357   76  0  1   74   91    65 0.410   3.05
 3.16 Intr - 105035 104962   74  1  2  119   84    67 0.402   7.53
 3.15 Intr - 105326 105229   98  2  2   83   22    49 0.448  -4.31
 3.14 Intr - 107170 107054  117  1  0   60   93    96 0.989   7.04
 3.13 Intr - 109426 109320  107  2  2  115  116    95 0.999  14.01
 3.12 Intr - 111048 110964   85  0  1   57   84   132 0.999   8.17
 3.11 Intr - 114367 114273   95  2  2   29  105    93 0.969   3.86
 3.10 Intr - 116157 116116   42  1  0   83   87    39 0.593   0.59
 3.09 Intr - 123389 123292   98  1  2   98  111    93 0.941  11.33
 3.08 Intr - 125892 125815   78  2  0  136   69    81 0.996   8.75
 3.07 Intr - 130497 130453   45  2  0   60  106    49 0.587   0.51
 3.06 Intr - 132244 132112  133  2  1  123   99   166 0.999  19.98
 3.05 Intr - 138007 137884  124  1  1   89   80   132 0.956  11.74
 3.04 Intr - 139045 138965   81  1  0   46   31   123 0.649   1.32
 3.03 Intr - 147762 147697   66  0  0   73   95    53 0.860   2.68
 3.02 Intr - 148437 148384   54  0  0   84  110    36 0.925   3.66
 3.01 Init - 150231 150040  192  0  0   37   85   186 0.870  10.31
 3.00 Prom - 150804 150765   40                              -8.35

 4.00 Prom + 151748 151787   40                              -9.75
 4.01 Init + 154168 154234   67  0  1   37   44    81 0.229  -0.11
 4.02 Intr + 155281 155347   67  2  1   91   89    90 0.944   6.44
 4.03 Intr + 155506 155730  225  1  0   70   29   154 0.825   3.88
 4.04 Intr + 155982 156108  127  0  1   33   59   277 0.379  19.06
 4.05 Intr + 158603 159216  614  1  2  111   99   626 0.996  56.25
 4.06 Intr + 163397 163517  121  2  1   52   95   113 0.999   7.98
 4.07 Intr + 172283 172366   84  1  0   88   90    98 0.998   9.10
 4.08 Term + 179608 179877  270  0  0   87   42   287 0.999  18.50
 4.09 PlyA + 179926 179931    6                               1.05

 5.02 PlyA - 182002 181997    6                               1.05
 5.01 Sngl - 183352 183050  303  1  0   86   40   396 0.997  30.18
 5.00 Prom - 217074 217035   40                              -3.75

 6.02 PlyA - 217129 217124    6                              -0.45
 6.01 Sngl - 218683 218420  264  1  0   88   42   241 0.959  12.45
 6.00 Prom - 221180 221141   40                              -6.85

 7.05 PlyA - 221528 221523    6                               1.05
 7.04 Term - 224391 224322   70  2  1   75   38    70 0.210  -2.87
 7.03 Intr - 228632 228532  101  2  2   86  110    84 0.637   8.39
 7.02 Intr - 229117 228910  208  0  1   30   56   162 0.497   5.36
 7.01 Init - 230011 229851  161  1  2   30  102    91 0.384   4.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_1|493_aa
XVPNRALPSGTVGRGPLSSRPQNGRASGSLHPTSGKPTGIQLQPVRAASEAAPCKATEAE
LSEALGAHSLHHSEAENGVEEKKKACRSPTAQSPTPSVEADSPDQKKIISLWSKSSFDGA
SLASDKNDCKTESKNDPKTERKKSSSSSQISIPAFSVTLIKKTKTALLVPNALIIATVTD
RYIFVSLLSRDSTYKLLKSVCGHLENTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSD
LDGVVQQRRQDMEGYSSSGSQTPESENSRVILENTLPRVYHIGTELFYEHQILAVNLTKV
SLSSVSSVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEVL
CQELTANIVKLEKNSALGFVDKATDVPLPQSIYSPNNARAKLSLACGILRRQQEENSTSR
IVNQVEKIVNLVTEKGNRTQRKHGSGKSRFGGTREKWLKLQQSRSSAEGLPAAEAQTSEE
GAQPGGVKVAEEA

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_1|1482_bp
nnagtgcccaacagggcactgcctagtggaactgtaggaagggggccactgtcctccaga
ccccagaatggtagagcctctggcagcttgcaccctacatctggaaaacccacaggcatt
caactccaacccgtgagagcagccagcgaggctgcaccctgcaaagccacagaggcagaa
ctgtccgaggccttgggagcccactccttgcaccactcagaggctgagaatggtgtggag
gagaaaaagaaagcctgcaggtcgccaacagcccaatcccctaccccatctgtggaggcg
gactccccagaccagaagaaaatcattagcctatggtcaaaatccagttttgatggtgcc
tctttagcaagtgataagaacgactgtaaaacagaaagcaaaaatgaccctaagactgaa
agaaaaaagtcttcatcttccagccagatctctattccagctttctcggtaaccctaata
aagaaaaccaaaactgctcttctagtgccaaacgccctgatcatagcaacagtcacagac
aggtacatatttgtctccttactctccagagattcaacttacaaactactaaaatctgtg
tgtggacacttagaaaatacaagtgttggtaacagtcccaatccatcttctgctgaaaac
agtttccgagcagaccgcccttcatctctgcctctggatttcaatgatgaattctcagat
ctggatggagtggttcaacaaagaaggcaagacatggaaggatatagcagttctggttct
caaactcctgaatctgagaactctcgagttattttggaaaataccttgcctcgggtgtac
cacattggcactgagttgttttatgaacatcagatcctggccgttaacctaacgaaagtt
tctctttcatccgtttccagtgtctgtgcactaatcatctcgaccttctacatgagatac
agaattaatactctggaggagcagctggggttactaacctccattgtggacacccataat
actgaacaggcagcaccatctggcctgaggtcacaagtacaattcaatgtggaggttctc
tgtcaagagcttacagctaacatagtgaaattagaaaagaattcagctttaggctttgtt
gataaggccacagatgtacctttacctcaaagtatctacagtccaaacaacgctagggca
aaactgtccttagcctgtggcattcttagaaggcagcaggaggaaaactcaacatccaga
attgtgaaccaagtagaaaagattgttaacttggtaacagaaaagggaaacagaacacaa
agaaagcatggaagtggcaaatctaggtttgggggaacaagagagaagtggttgaaacta
caacagtctagaagctcagcggaggggcttcctgcagctgaagctcagacctctgaagaa
ggggcacagccaggtggtgttaaagtcgcagaggaggcataa

>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_2|60_aa
MTSGGVPVTPKAPEGMRYNRIPCVWGASPHGLTASSGGHATALSQQLLGNGECGKNSGCK

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_2|183_bp
atgaccagtgggggagtacctgtgacccccaaagccccagagggcatgcgttacaataga
attccatgcgtctggggtgcatcccctcatggcctgacagcgtcttcaggaggtcatgcc
actgccctaagccagcagcttctgggtaatggagaatgtggtaaaaacagtggatgcaag
tag

>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_3|683_aa
MWRLPRALCVHAAKTSKLSGPWSRPAAFMSTLLINQPQYAWLKELGLREENEGVYNGSWG
GRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDA
LREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIE
QWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLED
NKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGN
NAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG
NPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHD
ASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGI
VNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTWSLENSITRQHYGDGAKPL
ETTHMIQSASTRLHLQQWGSQYLSSPDSEPKGVEEKPFLFYSRKEVGIFDILPRKRKKRR
KPVGLAWSETGDVGAEEPEAIERGANRSSSSACELDLGHLGASLLREPTVWWFQGPRLLV
WDHKYFLISRNALSLRSALDTHY

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_3|2052_bp
atgtggcgccttcctcgcgcgctgtgtgtgcacgctgcaaagaccagcaagctctctgga
ccttggagcaggcctgccgccttcatgtccactctcctcatcaatcagccccagtatgcg
tggctgaaagagctggggctccgcgaggaaaacgagggcgtgtataatggaagctgggga
ggccggggagaggttattacgacctattgccctgctaacaacgagccaatagcaagagtc
cgacaggccagtgtggcagactatgaagaaactgtaaagaaagcaagagaagcatggaaa
atctgggcagatattcctgctccaaaacgaggagaaatagtaagacagattggcgatgcc
ttgcgggagaagatccaagtactaggaagcttggtgtctttggagatggggaaaatctta
gtggaaggtgtgggtgaagttcaggagtatgtggatatctgtgactatgctgttggttta
tcaaggatgattggaggacctatcttgccttctgaaagatctggccatgcactgattgag
cagtggaatcccgtaggcctggttggaatcatcacggcattcaatttccctgtggcagtg
tatggttggaacaacgccatcgccatgatctgtggaaatgtctgcctctggaaaggagct
ccaaccacttccctcattagtgtggctgtcacaaagataatagccaaggttctggaggac
aacaagctgcctggtgcaatttgttccttgacttgtggtggagcagatattggcacagca
atggccaaagatgaacgagtgaacctgctgtccttcactgggagcactcaggtgggaaaa
caggtgggcctgatggtgcaggagaggtttgggagaagtctgttggaacttggaggaaac
aatgccattattgcctttgaagatgcagacctcagcttagttgttccatcagctctcttc
gctgctgtgggaacagctggccagaggtgtaccactgcgaggcgactgtttatacatgaa
agcatccatgatgaggttgtaaacagacttaaaaaggcctatgcacagatccgagttggg
aacccatgggaccctaatgttctctatgggccactccacaccaagcaggcagtgagcatg
tttcttggagcagtggaagaagcaaagaaagaaggtggcacagtggtctatgggggcaag
gttatggatcgccctggaaattatgtagaaccgacaattgtgacaggtcttggccacgat
gcgtccattgcacacacagagacttttgctccgattctctatgtctttaaattcaagaat
gaagaagaggtctttgcatggaataatgaagtaaaacagggactttcaagtagcatcttt
accaaagatctgggcagaatctttcgctggcttggacctaaaggatcagactgtggcatt
gtaaatgtcaacattccaacaagtggggctgagattggaggtgcctttggaggagaaaag
cacactggtggtggcagggagtctggcagtgatgcctggaaacagtacatgagaaggtct
acttggtctcttgagaactctatcacaagacagcactatggggatggcgctaaaccatta
gaaaccacccatatgatccaatcagcttccaccaggctccacctccaacaatggggatca
caatatctatcatctccagactcagaacctaagggggtagaggaaaagcctttcctcttc
tacagcaggaaggaggttggcatatttgatattcttcccaggaagaggaaaaagaggagg
aagccagtggggctggcttggagtgaaacaggggatgtgggtgcagaagaaccagaagca
atagaaagaggagcaaatcgatcatcatctagtgcctgtgagctggatttgggtcacctg
ggtgcctccctgcttcgagaaccaacagtgtggtggtttcaaggacctcggcttctggtt
tgggaccacaaatatttcctaatctctagaaatgctctcagtttacgatctgctttagac
acgcactactaa

>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_4|524_aa
MGNCPQAARQLLCGNPEAVRGSVYSPGKTAGECTLSAESKNGLIQTPTDTNIRHAQAPYI
MWGCTVGPSHPQVRHPWMGSGYRGRTIQLERLPWKQYVEWIVEEQEQKRGGLSRAYRGRI
APREDGVGGRRYGRWAAFRLGFRHDGRTQRQAAAIASECERRKVLGGDSAMRAFQNTATA
CAPVSHYRAVESVDSSEESFSDSDDDSCLWKRKRQKCFNPPPKPEPFQFGQSSQKPPVAG
GKKINNIWGAVLQEQNQDAVATELGILGMEGTIDRSRQSETYNYLLAKKLRKESQEHTKD
LDKELDEYMHGGKKMGSKEEENGQGHLKRKRPVKDRLGNRPEMNYKGRYEITAEDSQEKV
ADEISFRLQEPKKDLIARVVRIIGNKKAIELLMETAEVEQNGGLFIMNGSRRRTPGGVFL
NLLKNTPSISEEQIKDIFYIENQKEYENKKAARKRRTQVLGKKMKQAIKSLNFQEDDDTS
RETFASDTNEALASLDESQEGHAEAKLEAEEAIEVDHSHDLDIF

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_4|1575_bp
atgggaaattgtcctcaagcagctcgacaacttctgtgtgggaacccagaagcggttaga
ggttcagtgtactctcctggcaaaactgctggcgagtgtaccctttctgcagaaagtaaa
aatggccttattcagacccccacagataccaacatccgccatgctcaagccccttacatt
atgtgggggtgcacggtgggtccttcccatccgcaggttcggcatccgtggatggggagt
ggatacagagggcggactatacagcttgaaaggcttccctggaagcaatatgtagagtgg
attgtggaggagcaagaacagaagcggggaggcttgtccagagcatacaggggaaggatc
gcaccgcgggaagatggcgttggaggtcggcgatatggaagatgggcagctttccgactc
ggattccgacatgacggtcgcacccagcgacaggccgctgcaattgccagtgagtgtgaa
aggaggaaagtgctaggtggcgacagtgctatgagggccttccagaacacggcaactgca
tgtgcaccagtatcacattatcgagctgttgaaagtgtggattcaagtgaagaaagtttt
tctgattcagatgatgatagctgtctttggaaacgcaaacgacagaaatgttttaaccct
cctcccaaaccagagccttttcagtttggccagagcagtcagaaaccacctgttgctgga
ggaaagaagattaacaacatatggggtgctgtgctgcaggaacagaatcaagatgcagtg
gccactgaacttggtatcttgggaatggagggcactattgacagaagcagacaatccgag
acctacaattatttgcttgccaagaaacttaggaaggaatctcaagagcatacaaaagat
ctagacaaggaactagatgaatatatgcatggtggcaaaaaaatgggatcaaaggaagag
gaaaatgggcaaggtcatctcaaaaggaaacgacctgtcaaagacaggctagggaacaga
ccagaaatgaactataaaggtcgatacgagatcacagcggaagattctcaagagaaagtg
gctgatgaaatttcattcaggttacaggaaccaaagaaagacctgatagcccgagtagtg
aggattattggtaacaaaaaggcaattgaacttctgatggaaaccgctgaagttgaacaa
aatggtggtctctttataatgaatggtagtcgaagaagaacaccaggtggagtttttctg
aatctcttgaaaaacactcctagtatcagcgaggaacaaattaaggacattttctacatt
gaaaaccaaaaggaatatgaaaataaaaaagctgctaggaagaggagaacacaagtgttg
gggaaaaagatgaaacaagctattaaaagtctaaattttcaagaagatgatgatacatca
cgagaaacttttgcaagtgacacgaatgaggccttggcctctcttgatgagtcacaggaa
ggacatgcagaagccaagttggaggcagaggaagccattgaagttgatcattctcatgat
ttggacatcttttaa

>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_5|100_aa
MASLSELAYIYSALILHNDKINALIKAAGVNVEPFWPGVFAKALANVSIGNPICNVRAGG
LAAAGDPTPSTAAASVEKKVEAKKEESEESDEDMGFGLFD

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_5|303_bp
atggcctccctctccgagctcgcctacatctactcggccctcattctgcataatgataaa
atcaatgccctcattaaagcagctggtgtaaatgttgaacctttctggcctggcgtgttt
gcaaaggccctagccaatgtcagcatcgggaaccccatctgcaatgtaagggctggtgga
cttgcagcagctggagatcctaccccctccactgctgctgcttcagttgagaagaaagtg
gaagcaaagaaagaagaatccgaggaatctgatgaggacatgggctttggtctttttgac
taa

>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_6|87_aa
MAAWSPAAAAPLLRGICGLPLHHGMFATQTEGELRVTQILKEKFPRATAIKVTDISGVVG
RCMKLKLNQKNLRRRELSSSTRWFIRH

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_6|264_bp
atggcggcatggagcccggccgcagcagcgcctctgctccgcgggatctgcgggcttcca
cttcaccatgggatgtttgccacccagactgagggggagctcagagtgacccaaattctc
aaagaaaagtttccacgagctacagctatcaaagtcactgacatttctggagttgtggga
cgatgtatgaaattaaaattgaatcagaagaatttaaggagaagagaactgtccagcagc
accagatggtttatcaggcactaa

>gi568815593r:126444968_126695114|GENSCAN_predicted_peptide_7|179_aa
MWMCVTFGAENLGQEDSFGRPAPCPRPHSMRRSTYDLGSSDQPAQGTSHQFQIGPREDRR
PFYSQYAFYYPTPPDIRKKLQKLDSGPQTPQQDLINLTFKVYNNREEAAKRQCISELQLP
ASTISLAQQLKTDAAQSLWKLRDYHGPRASSNSYSGGIRACPRDATGYSPFELLYGRSF

>gi568815593r:126444968_126695114|GENSCAN_predicted_CDS_7|540_bp
atgtggatgtgcgtgacatttggtgctgaaaacctgggacaggaggactcctttgggaga
ccagccccctgtcctcgccctcactccatgaggagatccacctacgaccttgggtcctca
gaccagccagcccaaggaacatctcaccaatttcaaatcggacccagagaggacagaagg
ccgttttattctcaatatgcattttattacccgacccctcccgacattagaaaaaaactc
caaaaattggattctggtcctcaaaccccacaacaggacttaattaacctcaccttcaag
gtgtacaataatagagaagaagcagccaagcgacaatgcatctctgagttacagctacct
gcctccactatctccttggctcaacagctgaagactgacgctgcccaatcgctttggaag
ctccgggactatcacggaccccgagcttcgagtaactcttacagtggaggaattcgggcc
tgtcctcgggatgctacagggtacagcccatttgagctcctgtatggacgctccttttga