GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:52:49

Sequence gi568815593f:149497770_149732188 : 234419 bp : 43.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -   7826   7678  149  1  2   70   96    65 0.829   5.38
 1.07 Intr -   9364   9258  107  1  2   57   82    60 0.892   1.31
 1.06 Intr -  12184  12110   75  1  0   95  115    34 0.898   6.51
 1.05 Intr -  14103  14025   79  2  1   90   92   -44 0.784  -4.25
 1.04 Intr -  15440  15301  140  2  2   57  107   103 0.949   8.36
 1.03 Intr -  22619  22521   99  2  0  133   96   -20 0.912   3.61
 1.02 Intr -  27402  27276  127  2  1  106   91    27 0.895   5.48
 1.01 Init -  30814  30786   29  1  2   96   60    23 0.597  -0.63
 1.00 Prom -  42463  42424   40                              -3.86

 2.07 PlyA -  45800  45795    6                               1.05
 2.06 Term -  48062  47793  270  2  0   39   38   217 0.709   7.28
 2.05 Intr -  52052  51945  108  2  0   77   50    97 0.324   5.28
 2.04 Intr -  52181  52169   13  1  1   47   95     7 0.498  -7.92
 2.03 Intr -  52412  52306  107  2  2  137  107    98 0.730  15.61
 2.02 Intr -  53196  53073  124  2  1  100   74   200 0.847  20.39
 2.01 Init -  65292  65138  155  0  2   90   75    36 0.461   1.96
 2.00 Prom -  68833  68794   40                              -3.16

 3.00 Prom +  69100  69139   40                              -5.76
 3.01 Init +  76819  77005  187  0  1   44   66   107 0.705   3.32
 3.02 Intr +  83688  83855  168  1  0   35  100    72 0.340   3.02
 3.03 Term +  84611  84678   68  0  2   39   29   138 0.408   1.10
 3.04 PlyA +  84802  84807    6                               1.05

 4.03 PlyA -  85877  85872    6                               1.05
 4.02 Term - 100760 100485  276  2  0  -52   47   519 0.548  29.26
 4.01 Init - 101518 101483   36  1  0   51   35    62 0.535  -4.06
 4.00 Prom - 102621 102582   40                              -3.56

 5.00 Prom + 102631 102670   40                             -10.74
 5.01 Init + 102690 102695    6  2  0   79   66     4 0.547  -1.96
 5.02 Intr + 103339 103462  124  0  1  110   99   111 0.905  14.56
 5.03 Intr + 111779 111926  148  0  1  129   59   270 0.743  27.49
 5.04 Intr + 118798 118997  200  1  2   76   82   267 0.587  23.89
 5.05 Intr + 120407 120537  131  0  2  108   84   204 0.996  22.41
 5.06 Intr + 121169 121273  105  1  0   48   94   157 0.991  12.71
 5.07 Intr + 122585 122695  111  1  0   43   59    82 0.721   1.38
 5.08 Intr + 123964 124293  330  0  0  108  110   353 0.981  35.33
 5.09 Intr + 126243 126371  129  2  0   70   82    64 0.848   4.89
 5.10 Intr + 129307 129502  196  0  1   80   71   256 0.965  22.09
 5.11 Intr + 131040 131197  158  1  2   87  109    60 0.996   7.73
 5.12 Intr + 134213 134351  139  1  1  108  -14   190 0.468  10.84
 5.13 Intr + 137340 137453  114  1  0   65   86    44 0.268   2.32
 5.14 Term + 137772 137806   35  1  2  110   37    22 0.360  -2.95
 5.15 PlyA + 138429 138434    6                               1.05

 6.07 PlyA - 138691 138686    6                               1.05
 6.06 Term - 140726 140391  336  2  0   61   49   134 0.665   1.37
 6.05 Intr - 143379 143230  150  0  0   53  119    66 0.882   6.56
 6.04 Intr - 146913 146820   94  2  1   42   65   100 0.562   3.07
 6.03 Intr - 158945 158913   33  1  0   98   97    18 0.008   1.04
 6.02 Intr - 203155 203019  137  1  2  109   29    74 0.044   2.97
 6.01 Init - 203303 203241   63  2  0   97   84     5 0.805   2.15
 6.00 Prom - 224153 224114   40                              -3.46

 7.00 Prom + 226275 226314   40                              -3.66
 7.01 Init + 232574 232651   78  1  0   85   96   150 0.456  16.56
 7.02 Intr + 232770 232932  163  2  1    6   38   151 0.238   1.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_1|269_aa
MEVKVETKNKWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV
LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ
QAASSSGQGQQAQTPTGKQTDKTKSNMKX

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_1|807_bp
atggaggtgaaggtagaaactaagaataagtggtatggtcaggaaaaagactacaatgta
ctagtcatggatcttctgggacctagcctcgaagacctcttcaatttctgttcaagaagg
ttcacaatgaaaactgtacttatgttagctgaccagatgatcagtagaattgaatatgtg
catacaaagaattttatacacagagacattaaaccagataacttcctaatgggtattggg
cgtcactgtaataagttattccttattgattttggtttggccaaaaagtacagagacaac
aggacaaggcaacacataccatacagagaagataaaaacctcactggcactgcccgatat
gctagcatcaatgcacatcttggtattgagcagagtcgccgagatgacatggaatcatta
ggatatgttttgatgtattttaatagaaccagcctgccatggcaagggctaaaggctgca
acaaagaaacaaaaatatgaaaagattagtgaaaagaagatgtccacgcctgttgaagtt
ttatgtaaggggtttcctgcagaatttgcgatgtacttaaactattgtcgtgggctacgc
tttgaggaagccccagattacatgtatctgaggcagctattccgcattcttttcaggacc
ctgaaccatcaatatgactacacatttgattggacaatgttaaagcagaaagcagcacag
caggcagcctcttccagtgggcagggtcagcaggcccaaacccccacaggcaagcaaact
gacaaaaccaagagtaacatgaaagnn

>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_2|258_aa
MKMGADSQNCGNSGTTGSQTLMEHQAAELRFIELQMNYVNEPRGEGDDLSQMMASSSGSK
AEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQ
GGVGIPHIRWWFPLCVQVIFDPYAEGLAAAFFTAALLMYLGLSSEVDLKALGEPRLKVQT
WPSPRTTPHTTSPENGTEMVGSRFLRNMHFAKKHKKGLKKMQANNAKAMSALAEASRALV
KPKEVKPKIPKGVSCELD

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_2|777_bp
atgaagatgggtgctgactctcaaaactgtgggaattcaggcacaactggaagtcagacc
ctgatggaacaccaagcggcagaattgagatttattgagctgcagatgaactatgtaaat
gagccaaggggggagggggatgatttaagtcaaatgatggcgagtagcagcggctccaag
gctgaattcattgtcggagggaaatataaactggtacggaagatcgggtctggctccttc
ggggacatctatttggcgatcaacatcaccaacggcgaggaagtggcagtgaagctagaa
tctcagaaggccaggcatccccagttgctgtacgagagcaagctctataagattcttcaa
ggtggggttggcatcccccacatacgctggtggtttcctttatgcgtgcaggtcatcttt
gatccctacgcggaagggttggctgctgccttttttacggcggcacttctgatgtactta
ggtttgtccagtgaagtggatttgaaggcacttggagagccgcggcttaaggtacagaca
tggccaagtccacgaaccacaccacacacaaccagtcctgaaaatggcacagaaatggtg
ggctccaggttcctgaggaacatgcactttgccaagaagcacaagaagggcctaaagaag
atgcaggccaacaatgccaaggcaatgagtgcacttgctgaggctagcagggccctcgta
aagcccaaggaggttaagcccaagatcccaaagggtgtcagctgcgaactcgattga

>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_3|140_aa
MYNGYASDLLVYIASPNFPLSEPYIHLPVDTFTCIAQVSASPKFVSSIVHLTIQDRNPRV
SPGSCVGIAAPASALGGHSHPERRGCRELGDAPLLPRLRCCPGGRPPCVSAGRHLARAGR
QLVEEYLLCVQTASCVIQEA

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_3|423_bp
atgtacaacggatatgccagtgacctcctagtctatattgccagtccaaacttccctctc
tcagaaccttacatccatcttcctgttgacaccttcacttgcatagcacaggtatcagct
agcccaaaatttgtctcatccatcgtccacctgactatccaagacagaaatcccagagtc
agcccaggcagctgcgtgggcatagccgcgcccgccagcgccctcggtgggcacagccac
ccggagcggcgcgggtgccgggagctgggcgacgcgcccctcctgccccggctgcgctgt
tgcccgggcggccgacctccgtgcgtgagcgccggcaggcaccttgcgcgcgcggggagg
cagctggtggaggagtacctgctgtgcgtccagacagccagctgtgtgatccaggaagca
tag

>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_4|103_aa
MTPVFGGLGAVGTLEGEAGKKEEEEEEEEEEKERRGRRKKRKEKKEKEKKEKRKRKERKR
KKRKRKKRKRKKKRKRKRKKEEEEEEEEEEEEEEEEEEEEESV

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_4|312_bp
atgacacctgtcttcgggggcctgggggctgtgggcacccttgaaggggaagcaggaaaa
aaagaagaagaggaggaagaagaagaagaggaaaaagaaagaagaggaagaagaaagaag
aggaaggagaagaaggagaaggagaagaaggagaagaggaagaggaaggagaggaagagg
aagaagaggaagaggaagaagaggaagaggaagaagaagaggaagaggaagaggaagaaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gagtcagtttaa

>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_5|641_aa
MVLPQGDLDVLFSNIDDIIKVNSRFLHDLQETASKEEEQVQLVGNIFLEFQEELEQVYKV
YCASYDQALLLVDTYRKEPELQRHIQGIVEAVVPQAGSSGLSFLLVIPLQRITRYPLLLQ
KILENTVPDASAYPVLQRAVSALQDVNTNINEYKMRKEVASKYTKVEQLTLRERLARINT
HTLSKKTTRLSQLLKQEAGLIPRTEDKEFDDLEERFQWVSLCVTELKNNVAAYLDNLQAF
LYFRPHEYNLDIPEGPAVQYCNLARDLHLEAFLKFKQRLEGLVWQPLCSLAKALLGPQNL
IKKRLDKLLDFERVEEKLLEVGSVTYQEEAARHTYQALNSLLVAELPQFNQLVMQWLGQI
MCTFVTLQRDLAKQVLQRAEGSMAQLPHHHVPEPAFRKLVEDALGRTSNQLRSFQETFEK
VQPPPTTQPLLPGSERQVQALLSRYGPGKLYQVTSNISGTGTLDLTLPRGQIVAILQNKD
TKGNSGRWLVDTGGHRGYVPAGKLQLYHVVPSAEELRRQAGLNKDPRCLTPEPSPALVPS
IPTMNQVIAAYPFVARSSHEVSLQAGQPVTILEAQDKKGNPEWSLVEVNGQRGSWPELLG
DTERNQTDEARSSRSQSLRQADEAPINYVPCNCMLLEAENF

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_5|1926_bp
atggtgttgccgcagggagatctggatgtcctgttctcaaacattgatgatatcatcaaa
gtgaacagcagattcctccatgatctgcaggagacagcctccaaggaagaggaacaagtg
cagctagttggtaacatatttctggaattccaagaggagttggagcaagtctataaggtc
tactgtgccagctacgaccaggccttgctactggtggacacgtaccggaaggagccggag
ctgcagcggcacatccagggcatcgttgaggcggtggtgccgcaagctggatcttcaggc
ctcagtttcttgctggtaattcctctgcagaggatcaccaggtacccactgctgctgcag
aaaatcctggagaacacagtccctgatgccagtgcctatcctgtccttcagagggctgtc
tctgccctccaggacgtgaacaccaatatcaatgagtacaagatgcgcaaggaagtggcc
tccaagtacaccaaggtagagcagctgaccctccgggagcggctggcccgcatcaacaca
cacaccctctccaagaagaccacccggctgagccagctgctgaagcaggaggcggggctg
atccccaggacagaagacaaggaatttgatgatttagaagagaggttccagtgggtgtct
ctgtgtgtgactgagctgaagaacaacgtggctgcttacctggacaatctgcaggctttc
ctctacttcaggccgcacgaatacaatctggacatccccgaggggcctgcagtgcagtat
tgcaatttggcaagagaccttcaccttgaggccttcctgaaatttaagcaacggctagaa
ggcctggtgtggcagccactgtgcagcctggccaaagccctgcttggccctcagaacctg
atcaagaagcgtctggacaagctactggactttgagcgggtggaagagaagctgctggag
gtgggcagtgtgacctaccaggaggaggccgcccggcacacataccaggcactcaactcg
ctgctagtggctgagctcccacagtttaaccagctggtcatgcagtggctgggccagatc
atgtgcacattcgtgaccctccagagggaccttgcaaagcaagtgctgcagagggcagag
ggaagcatggcccagctgccccaccaccacgtcccagagcctgccttcaggaagctggtg
gaggacgcactgggccggacgagtaaccagcttcgctcctttcaagagacctttgagaaa
gtgcagccacctcccaccacacaaccgctccttccagggtctgaacgccaggtgcaggct
ctcctgagcaggtatggccctgggaagctgtaccaggtgacaagcaacatcagtgggact
gggactctggacctgactctgcctcggggccaaatcgtggccatccttcaaaacaaggac
accaaaggcaacagcggccgctggctggtggacaccgggggacatcgtgggtatgtgccg
gctgggaaactacagctgtaccatgtggtccccagtgcagaggagctcagaaggcaggcg
gggctgaacaaagacccccgatgtctaacaccggagcccagcccagctctagtgccctct
attcccaccatgaaccaggtcatagccgcgtacccttttgtggccagaagcagccatgaa
gtgagcctgcaggcaggccagcctgtgaccatcctggaggcccaggacaagaaggggaac
cctgagtggagcctggtggaagtgaatggacagagggggagctggcctgagctgctgggg
gatacagaaagaaatcagacagatgaggcccggtcttccagatcccagtctctaaggcag
gcagatgaggcacccatcaattacgtgccgtgcaactgcatgctccttgaggctgagaac
ttctga

>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_6|270_aa
MGKGSENESQEKSSKLLVPHHSGDGQMNINVPPVTATPVGTGRVVQGLAHFSISIRFPQH
LLPPSSKIWELAVPLWTNLIINHQGSLSTGFMPDPVLGVRDEQKIMKMSSAKVSRDVSCV
HIPTTPSAGLFPGLPTRRKVRKVRRQRDEATCLKAATQLLLLKPPADSWAPKLLRPLETP
KRMLLAAKRPEPITTGTAPSVSSVPAYCLVTCPACPCADAVDARTPYSWREAGKPSGACA
YEHCPSLAAPGMGEEGKPQECLWGVTAAPE

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_6|813_bp
atggggaaaggctcagaaaacgagtcccaggagaaaagctccaaactcttagtcccacat
catagcggagatgggcagatgaacatcaatgtccctccagtgacggccacaccagtgggg
acagggagggtagtccaggggctggcccacttctcaatctccatcaggttcccccagcac
ctgctgcccccttcttcaaagatatgggaactagcagtgcccctttggactaatctcatc
atcaaccatcaaggtagcctaagcactggctttatgccagatcctgtgctgggtgtcaga
gatgaacagaagatcatgaaaatgtctagtgccaaagtctcccgtgatgtatcctgtgtc
cacatcccaacaaccccatcggcaggactctttcctggtttgcccacaaggaggaaagtg
aggaaagtgaggcgtcagagagatgaagcaacttgtttgaaggcggccacacagctgctt
ctactgaagcctccagcagactcttgggccccaaagctgctgcgtcccctagaaacacct
aaaaggatgctcctggctgcaaagcgccctgagcctataaccacaggaactgctccatca
gtatccagtgtgcctgcttattgcctggttacctgcccggcttgtccttgtgcagatgca
gtggatgccagaacaccctacagctggagagaggcggggaaaccctcaggtgcttgtgcc
tacgagcactgccccagcctggcagcaccagggatgggagaggaaggaaagccccaggaa
tgcctgtggggtgtgacagcagcccctgagtga

>gi568815593f:149497770_149732188|GENSCAN_predicted_peptide_7|81_aa
MAGNDCGALLDEELSSFFLNYLADTQAAEPPFQAPCDALRYRGREPEVSRRVPERWGRYG
RWGGSSLGRLESATPRAKLGX

>gi568815593f:149497770_149732188|GENSCAN_predicted_CDS_7|243_bp
atggcggggaacgactgcggcgcgctgctggacgaagagctctcctccttcttcctcaac
tatctcgctgacacgcaggctgcagagccccccttccaggcgccctgcgatgcgctccgt
taccggggcagggagccggaggtctcccggcgcgtgccggagcgctgggggcgctacggc
cgctggggagggtctagccttggccgcttggagtctgccaccccgcgggcaaaactgggg
gnn