GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:04:13

Sequence gi568815592r:96791107_96997801 : 206695 bp : 38.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   2431   2426    6                               1.05
 1.01 Sngl -   8625   7366 1260  0  0   91   42   580 0.987  49.31
 1.00 Prom -  28216  28177   40                              -4.55

 2.00 Prom +  40498  40537   40                              -3.25
 2.01 Init +  41811  41904   94  2  1   64   -7   112 0.620  -0.11
 2.02 Intr +  46271  46482  212  0  2   92  105   198 0.770  19.61
 2.03 Intr +  51959  52164  206  1  2   85   52    59 0.003  -0.92
 2.04 Intr +  68564  68786  223  2  1   49   85   144 0.027   7.41
 2.05 Intr +  69133  69480  348  0  0   42   45   192 0.037   4.93
 2.06 Intr +  72452  72539   88  1  1   43   87    26 0.026  -3.38
 2.07 Term +  86192  86409  218  0  2   68   39   152 0.768   4.62
 2.08 PlyA +  87302  87307    6                               1.05

 3.04 PlyA -  87581  87576    6                               1.05
 3.03 Term - 100285  99998  288  1  0   96   49   197 0.999  10.99
 3.02 Intr - 105741 105638  104  1  2   93   99   165 0.984  17.07
 3.01 Init - 106695 106254  442  0  1   66    4   331 0.924  18.77
 3.00 Prom - 108092 108053   40                              -4.65

 4.07 PlyA - 109362 109357    6                               1.05
 4.06 Term - 121809 121696  114  0  0  118   49    44 0.547   1.09
 4.05 Intr - 133958 133731  228  2  0   94   34   200 0.469  12.34
 4.04 Intr - 137379 137261  119  1  2   61   72    57 0.442   0.66
 4.03 Intr - 147440 147198  243  0  0   27   93   213 0.365  12.25
 4.02 Intr - 172285 172250   36  2  0   80   79    49 0.257   0.52
 4.01 Init - 179156 179000  157  2  1   62   63   112 0.608   6.22
 4.00 Prom - 180016 179977   40                              -6.65

 5.00 Prom + 182102 182141   40                              -4.45
 5.01 Init + 184736 185071  336  1  0   53  114   250 0.358  21.42
 5.02 Term + 185910 185987   78  2  0   72   34    66 0.707  -3.62
 5.03 PlyA + 186745 186750    6                               1.05

 6.03 PlyA - 187050 187045    6                               1.05
 6.02 Term - 188921 188542  380  0  2   10   42   222 0.341   3.77
 6.01 Init - 193020 192795  226  0  1   66   60    88 0.465   2.48
 6.00 Prom - 193478 193439   40                              -6.15

 7.06 PlyA - 193643 193638    6                               1.05
 7.05 Term - 194820 194582  239  1  2   61   48   167 0.950   5.35
 7.04 Intr - 195173 194905  269  1  2   28   71   223 0.479  10.85
 7.03 Intr - 195599 195445  155  2  2   44   65    29 0.358  -5.85
 7.02 Intr - 196326 195817  510  0  0   17   69   235 0.460   6.74
 7.01 Init - 197931 197926    6  0  0   61   58    17 0.679  -4.07
 7.00 Prom - 198109 198070   40                              -5.35

 8.03 PlyA - 198234 198229    6                               1.05
 8.02 Term - 200855 200557  299  0  2   72   48   213 0.333  10.14
 8.01 Init - 201118 201067   52  1  1   99   55   100 0.803   9.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 115417 115461   45  0  0   74  110    49 0.850   6.43
S.002 Sngl + 129062 129304  243  1  0   95   48   157 0.864   7.23


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_1|419_aa
MVFSAVLTAFHTGTSNTTFVVYENTYMNITLPPPFQHPDLSPLLRYSFETMAPTGLSSLT
VNSTAVPTTPAAFKSLNLPLQITLSAIMIFILFVSFLGNLVVCLMVYQKAAMRSAINILL
ASLAFADMLLAVLNMPFALVTILTTRWIFGKFFCRVSAMFFWLFVIEGVAILLIISIDRF
LIIVQRQDKLNPYRAKVLIAVSWATSFCVAFPLAVGNPDLQIPSRAPQCVFGYTTNPGYQ
AYVILISLISFFIPFLVILYSFMGILNTLRHNALRIHSYPEGICLSQASKLGLMSLQRPF
QMSIDMGFKTRAFTTILILFAVFIVCWAPFTTYSLVATFSKHFYYQHNFFEISTWLLWLC
YLKSALNPLIYYWRIKKFHDACLDMMPKSFKFLPQLPGHTKRRIRPSAVYVCGEHRTVV

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_1|1260_bp
atggtcttctcggcagtgttgactgcgttccataccgggacatccaacacaacatttgtc
gtgtatgaaaacacctacatgaatattacactccctccaccattccagcatcctgacctc
agtccattgcttagatatagttttgaaaccatggctcccactggtttgagttccttgacc
gtgaatagtacagctgtgcccacaacaccagcagcatttaagagcctaaacttgcctctt
cagatcaccctttctgctataatgatattcattctgtttgtgtcttttcttgggaacttg
gttgtttgcctcatggtttaccaaaaagctgccatgaggtctgcaattaacatcctcctt
gccagcctagcttttgcagacatgttgcttgcagtgctgaacatgccctttgccctggta
actattcttactacccgatggatttttgggaaattcttctgtagggtatctgctatgttt
ttctggttatttgtgatagaaggagtagccatcctgctcatcattagcatagataggttc
cttattatagtccagaggcaggataagctaaacccatatagagctaaggttctgattgca
gtttcttgggcaacttccttttgtgtagcttttcctttagccgtaggaaaccccgacctg
cagataccttcccgagctccccagtgtgtgtttgggtacacaaccaatccaggctaccag
gcttatgtgattttgatttctctcatttctttcttcatacccttcctggtaatactgtac
tcatttatgggcatactcaacacccttcggcacaatgccttgaggatccatagctaccct
gaaggtatatgcctcagccaggccagcaaactgggtctcatgagtctgcagagacctttc
cagatgagcattgacatgggctttaaaacacgtgccttcaccactattttgattctcttt
gctgtcttcattgtctgctgggccccattcaccacttacagccttgtggcaacattcagt
aagcacttttactatcagcacaacttttttgagattagcacctggctactgtggctctgc
tacctcaagtctgcattgaatccgctgatctactactggaggattaagaaattccatgat
gcttgcctggacatgatgcctaagtccttcaagtttttgccgcagctccctggtcacaca
aagcgacggatacgtcctagtgctgtctatgtgtgtggggaacatcggacggtggtgtga

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_2|462_aa
MEKPDIQLILETPIIQEMNNAKEGKTSEEVLKNNAARRRRKEDNEEEVVAAAAIQAAVAG
AGAESEEHRGRAPPPREPPRGSRPQGNQRSLLKAPAPVLDREGGWCPVTSSGCQLPLCAA
VAYSPSISGLPSFSGGWCPVTSSGCLHLGMSMVKSVVKSIGTKWLMLLFFLDLWNFELER
DDLGYLVEEISKQQSIQEVTWVLLKAFSFKRETDHKSLENLQPDNAIEKKIPFSEEKFKP
AAEICMMYGNAWMPWQKFAAGVVPSWRTSARSVKKGNVGLEPPHRITTGALPSGAVRRGP
LSSIPQSGRSTVSFHHVPGKSADTQCQSMKAARREAVPCKATGVELPKTMGTHLLPQCDL
NDLSKMPQNSSVLLMGSTPSIQGSNQWANRESTEAPEKLATQKMCGTVPAPRSNAECFCI
QVLQKLHALQNPCLLTEFSSFSFPLSCGSPTSCAIIEHTEAP

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_2|1389_bp
atggagaaacctgatattcaacttatactcgaaactcctatcattcaagaaatgaataat
gcaaaagaaggaaaaacatctgaagaagtgctgaagaacaacgctgccaggcggaggagg
aaggaggacaacgaagaggaggtggtggcggcggcggcgatacaggcggcggtggcggga
gctggagctgaaagtgaggagcatcgcggacgagcgccgccgcctcgcgagccgccgagg
ggttcccgcccccagggtaaccaacgctccctcttaaaggcgccggccccggttttagac
cgggagggtggctggtgtccagtgactagctctggctgccagctgcctctctgcgctgca
gttgcttactctccaagtatctctgggctcccatctttctcgggtggctggtgtccagtg
actagctctggctgcctccatcttgggatgtccatggtgaagtctgtggttaagtccata
gggactaaatggttgatgcttctgttctttttagatttgtggaactttgaacttgagaga
gatgatttagggtatctggtggaagaaatttctaagcagcaaagcattcaagaggtgact
tgggtgctattaaaggcattcagtttcaaaagggaaacagatcataaaagtttggaaaat
ttgcagcctgacaatgcaatagaaaagaaaatcccattttctgaggagaaattcaagcca
gctgcagaaatttgcatgatgtatggaaatgcctggatgccctggcagaaatttgctgca
ggggtggtgccctcatggagaacctctgctaggtcagtgaagaagggaaatgtggggttg
gagcccccacacagaatcactactggggcactgcctagtggggctgtgagaagagggcca
ctgtcctccataccccagagtggtagatccactgtcagctttcaccatgtgcctggaaaa
tctgcagatactcaatgccagtccatgaaagcagccagaagggaggctgtaccctgcaaa
gccacaggggtggagctgcccaagaccatgggaacccaccttttgcctcagtgtgacctg
aatgatctttccaaaatgccccagaattcttctgttttactaatgggatcaactccctca
atccaaggtagcaatcaatgggccaacagagagagcacggaagctccagagaaactggca
actcagaagatgtgtggcaccgtgcccgctccaaggagtaatgctgaatgcttttgcatt
caggttttgcaaaaacttcatgcacttcagaacccatgcttactaactgaattttcaagc
ttctcttttcccctttcttgtggaagcccaacttcctgtgccatcattgagcatactgag
gctccctga

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_3|277_aa
MGALVIRGIRNFNLENRAEREISKMKPSVAPRHPSTNSLLREQISREWCEGVSGPGGAES
LCCPAVPSVGPEAEGSASACSAAAARVGGALEGGAARPVTLRLSSAPAVRSAAPPTSETQ
RQQPVLPLTRPSPAAVTDLIQGIKIREVYPEVKGEIARKDEKLLSFLKDVYVDSKDPVSS
LQVKAAETCQEPKEFRLPKDHHFDMINIKSIPKGKISIVEALTLLNNHKLFPETWTAEKI
MQEYQLEQKDVNSLLKYFVTFEVEIFPPEDKKAIRSK

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_3|834_bp
atgggagcactagtgattcgcggtatcaggaatttcaacctagagaaccgagcggaacgg
gaaatcagcaagatgaagccctctgtcgctcccagacacccctctaccaacagcctcctg
cgagagcagattagtcgtgagtggtgcgagggcgtttcggggcccgggggcgcggagtcc
ctgtgctgcccggctgtccctagcgtgggtccggaggccgagggatcggcgtcagcctgc
tcggccgcagccgctcgggttggcggagcgttggaagggggagccgccaggccggtgaca
ttgagactgtcctccgcgcccgcggtgaggtcggcggccccgcctacttccgagacccag
aggcagcagccagtgctcccgctaaccaggccctcgccggctgctgtcacggacttgata
cagggaatcaaaatccgagaggtctatccagaagttaaaggagagattgctcgtaaagat
gaaaagctgctgtcgtttctaaaagatgtgtatgttgattccaaagatcctgtgtcttcc
ttgcaggtaaaagctgctgaaacatgtcaagagccgaaggaattcagattgccgaaagac
catcattttgatatgataaatattaagagcattcccaaaggcaaaatttccattgtagaa
gcattgacacttctcaataatcataagcttttcccagaaacctggactgctgagaaaata
atgcaggaataccagttagaacagaaagatgtgaattctcttcttaaatattttgttact
tttgaagtcgaaatcttccctcctgaagacaagaaagcaatacgatcaaaatga

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_4|298_aa
MGSHRKGHSSCSTKSSRGDWARLEQTWTVAVVQLNDGVGPWSPRSTQMKFQKGRGGLLTL
INGEGSLNTTGHQGGPEQSEAATAAQRMLMRYLQDTRSMPEGGAQKRRCPLWGPALPQYH
LARDPRTLWQGTIGNLVELKSDPDAVSFPNLSSSIPSHPSAVASSAALHLPDHSSSTAFI
TRSATVCRTGYKERDWLTRWGERSAGLGARDGSAGTGLSLMHNGSASPHDAEVNRTRSSF
ALLVRGCSSEDERPSVFVCAKGLQGTLVRREYVQVVGRGADRQISSNYNAEELDHGSS

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_4|897_bp
atgggaagtcacagaaaaggtcattcaagctgtagtaccaagagcagtaggggagactgg
gccagactagagcagacctggactgtggctgtggttcagctgaatgatggagttgggcct
tggagcccaaggagcactcagatgaagtttcagaaaggaagaggaggactcctaactctt
atcaatggagaaggcagccttaataccactggtcatcagggaggaccagagcagtcagaa
gcagcaacagcagcacagagaatgctgatgaggtatctgcaggacacgagaagcatgccg
gaaggtggagcccagaagagaaggtgtccactgtggggcccagccctgccccagtaccac
ctggccagggaccccaggaccctctggcagggaacaatagggaacctagtggaactgaag
tctgatcctgatgctgtctccttcccaaatttgtcttcctccatcccctcccacccatcc
gcagttgcatcctctgctgcactccatcttccagaccatagttcttccacagctttcatc
actcgctcagctacagtctgcagaacaggttacaaggagagagactggcttacccgatgg
ggtgagcggtctgctgggttaggtgccagagacggcagcgcaggcaccggcctctccttg
atgcacaatggctctgcttcgccccacgatgctgaggttaacagaacccgcagtagcttc
gctctgctggttcggggatgcagtagcgaagacgagcgtcctagcgtgtttgtgtgtgcg
aaaggcttacagggtaccttggtgagaagggaatatgtgcaggtggtagggagaggagca
gacagacaaataagcagcaattacaatgcagaggaactggatcatggaagtagttag

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_5|137_aa
MVERKKMREQMVTLIECTGTRVASVDVQGMREQLAHRAGKRKNVDLIALLCSIQEMLTGQ
RLCHSESHNDSVLAALNQQRSDGILCDITLIAEEQKFHAHKAVLAACSDYFRSFGVDFQQ
QITCGNKIAVFLEDEST

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_5|414_bp
atggtggagagaaagaaaatgagggaacagatggtcacactcatagagtgcactggaacc
cgtgttgcctcagtcgatgttcaaggaatgagagagcagctggcccacagggctgggaaa
aggaaaaatgttgacttgattgctctcctttgtagtattcaagaaatgctgacaggccag
aggctctgccactccgaatctcacaatgacagtgtcctggcagcgctgaatcagcagagg
agtgatggcatcctctgcgacatcaccctgattgctgaggaacagaaattccatgctcac
aaggcagtcctagcagcatgcagtgactatttccggagctttggggttgatttccaacag
caaattacatgtggtaataagattgctgtttttcttgaagatgaaagtacataa

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_6|201_aa
MKAEIKMCFETNENKDTTYQDLWDAFKAVCRGKFIPLNAHKRKQERSKIDTLTSPLKELE
KQEQTHSKASRRQEITKFQDTKSIVRISVAFLYTNNIQAESQIKIAISFTIVTKRIKYLG
RQPTGEVKELYKENYKTLLIEISDDTNKWKNISCSWIGRINVVKMAILPKAMYTFNVIPI
KLPMMFFTELEKTYSKIHMEP

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_6|606_bp
atgaaggcagaaataaagatgtgctttgaaaccaatgagaacaaagacacaacatatcag
gatctctgggacgcattcaaagcagtgtgtagagggaaatttataccactaaatgcccac
aagagaaagcaggagagatctaaaattgacaccctaacatcaccattaaaagaactagag
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataacaaagtttcaggat
acaaaatcaattgtacgaatatcagtagcatttctatacaccaacaacatccaagctgag
agccaaatcaagattgcaatttcattcacaatagtcacaaaaagaataaaatacctagga
agacagccaaccggagaggtaaaagagctctacaaagagaattacaaaacacttctcatt
gaaattagcgatgataccaacaagtggaaaaatatttcatgctcatggataggaagaatc
aatgtcgtgaaaatggccatactgcctaaagcaatgtacacattcaatgttattcctatc
aaactaccaatgatgtttttcacagaattagaaaaaacctattctaaaattcatatggaa
ccataa

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_7|392_aa
MLWFANENKDTTYQNLWDTFKAVCRGKFIPLNAHKRKQERSKIDTLTSQLKELEKQEQTH
SKASRRQEISKIRAELKEIETQKTLQKINESRSWFFEKINKIDRPLARLIKKKREKNEID
AIKNDKGDITTDPIEIQTTGGWSQDGRIGTAPVYSSQRERCRRQVISAFPTEQMAHQEII
SRALLGGSYTHEASLIASTAVGDPTARQQPGWGRGARHCQGLSRGRLTPHTAGYSSETKI
PEERSGSNICCSPISAVLQPPLVIPRQTGSGVDLQQTPKDLQLRVLTVRRKTNKQKRHPH
QNPICTSPSSKTKGHSSSPAMEQSWTENDFDELRQEGFRQSNYSELKEEVRTHGKEVKNL
EKKLDEWLTRITNSREVLKGPDGTENQGTRTT

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_7|1179_bp
atgctgtggtttgccaacgagaacaaagacacaacataccagaatctctgggacacattc
aaagcagtgtgtagagggaaatttataccactaaatgcccacaagagaaagcaggagaga
tctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacat
tcaaaagctagcagaaggcaagaaataagtaagatcagagcagaactgaaggaaatagag
actcaaaaaacccttcaaaaaatcaatgaatccaggagctggttttttgaaaagatcaac
aaaattgatagaccgctagcaagactaataaagaagaaaagagagaagaatgaaatagat
gcaataaaaaatgataaaggggatatcaccactgatcccatagaaatacaaactactggg
gggtggagccaagatggccgcataggaacagctccagtctacagctcccagcgtgagcga
tgcagaagacaggtgatttctgcatttccaactgagcaaatggcacaccaggagattata
tcccgtgcattgcttggagggtcctacacccacgaagcctcgctcattgctagcacagca
gtgggagatccaactgcaaggcagcagccaggctgggggaggggcgcccgccattgccaa
ggcttgagtaggggcagactgacacctcacacggccggatactcctctgagacaaaaatt
ccagaggaacgatccggcagcaacatctgctgttcaccaatatctgctgttctgcagcct
ccactggtgatacccaggcaaacagggtctggagtggacctccaacaaactccaaaagac
ctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaaagacatccacac
caaaaccccatctgtacgtcaccatcatcaaagaccaaaggacacagctcctcaccagca
atggaacaaagctggacggagaatgactttgacgagttgagacaagaaggcttcagacaa
tcaaactactctgagctaaaggaggaagttcgtacccatggcaaagaagttaaaaacctt
gaaaaaaaattagatgaatggctaactagaataaccaattctagagaagtccttaaagga
cctgatggaactgaaaaccaaggcacgagaactacgtga

>gi568815592r:96791107_96997801|GENSCAN_predicted_peptide_8|116_aa
MDPLVPDTGSCISGNKRGWGGSTVIRDYHRPPAQRSHLTRKSGLFSMPSPAPATPHWAGP
LDLRPWPLPARALRGSSSALSWKGSPGGNRQATTFAALKPSLLWLSGLGRNAVIRH

>gi568815592r:96791107_96997801|GENSCAN_predicted_CDS_8|351_bp
atggatcccctggtaccggacaccggcagctgcatctctggcaacaagagaggctgggga
gggagcacagtgattagggactatcatagacccccagcacagcgcagccaccttacccgg
aaaagcggcctgttttcaatgccgtcccccgcccctgctactcctcactgggcagggcct
ctagatctgcgaccttggccactccctgctagggctctccgcggtagcagctctgcactt
tcttggaagggatctcccggaggtaacaggcaagctactacttttgctgctctgaagccc
tcgctcctgtggctctccggcttgggaaggaacgcagtgatcaggcactaa