GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:23:08

Sequence gi568815592r:73273111_73473263 : 200153 bp : 44.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  11393  11432   40                              -1.26
 1.01 Init +  18852  19451  600  2  0   89   65   330 0.543  26.09
 1.02 Term +  19734  20042  309  2  0   27   38   188 0.836   2.76
 1.03 PlyA +  20217  20222    6                               1.05

 2.04 PlyA -  21409  21404    6                               1.05
 2.03 Term -  26333  26038  296  0  2   61   34   173 0.884   4.67
 2.02 Intr -  36618  36442  177  1  0   78  105   104 0.914  10.99
 2.01 Init -  38343  38181  163  0  1   70   72    71 0.799   3.60
 2.00 Prom -  39289  39250   40                              -4.96

 3.00 Prom +  40990  41029   40                              -2.46
 3.01 Init +  49736  49843  108  1  0   52   94   168 0.970  14.02
 3.02 Term +  50007  50168  162  2  0   13   42   177 0.816   3.54
 3.03 PlyA +  51015  51020    6                               1.05

 4.06 PlyA -  54790  54785    6                               1.05
 4.05 Term -  68399  68301   99  2  0   68   47    53 0.003  -2.67
 4.04 Intr -  80639  80536  104  0  2   94   64    39 0.403   1.99
 4.03 Intr -  80922  80743  180  1  0  101   78   331 0.915  33.24
 4.02 Intr -  81160  81004  157  1  1    3  109   181 0.551  11.28
 4.01 Init -  81263  81204   60  2  0   78   80    55 0.571   2.95
 4.00 Prom -  84666  84627   40                              -4.76

 5.00 Prom +  85544  85583   40                              -8.26
 5.01 Init +  89285  89349   65  1  2   51   61    54 0.804  -0.37
 5.02 Intr +  89607  89788  182  0  2  116  109   139 0.940  18.31
 5.03 Intr +  89985  90164  180  1  0   82  102   154 0.462  16.04
 5.04 Term +  90446  90750  305  0  2   92   49   260 0.962  17.83
 5.05 PlyA +  90896  90901    6                               1.05

 6.05 PlyA -  91801  91796    6                               1.05
 6.04 Term -  95753  95674   80  0  2   86   47    51 0.837  -1.27
 6.03 Intr -  96275  96096  180  0  0   60   78   143 0.843  10.34
 6.02 Intr -  96583  96493   91  1  1   53   85   103 0.532   6.07
 6.01 Init -  96849  96610  240  0  0   88   35   245 0.433  15.07
 6.00 Prom - 107482 107443   40                              -2.46

 7.00 Prom + 108570 108609   40                              -2.16
 7.01 Init + 121796 122038  243  1  0   73   31    99 0.034   0.16
 7.02 Intr + 127124 127253  130  1  1   98  111    72 0.691  10.77
 7.03 Intr + 131580 131661   82  1  1   66   90    49 0.761   1.60
 7.04 Intr + 134850 134991  142  0  1   95   17    83 0.744   2.26
 7.05 Intr + 136138 136238  101  0  2  107   98    68 0.563   8.61
 7.06 Term + 149426 149528  103  2  1   42   50    66 0.090  -4.05
 7.07 PlyA + 149532 149537    6                               1.05

 8.05 PlyA - 150483 150478    6                               1.05
 8.04 Term - 166082 165985   98  0  2   78   48    71 0.882   0.23
 8.03 Intr - 167335 167099  237  2  0   70   63    70 0.493   0.29
 8.02 Intr - 172637 172418  220  2  1   76  116   135 0.989  12.97
 8.01 Init - 179071 178415  657  1  0   91  105   450 0.592  41.87
 8.00 Prom - 180964 180925   40                              -9.75

 9.00 Prom + 183247 183286   40                              -3.36
 9.01 Init + 186402 186568  167  2  2   78   86    86 0.697   6.55
 9.02 Intr + 188744 188961  218  2  2   28   85   237 0.617  15.55
 9.03 Intr + 193099 193298  200  2  2   79  110    44 0.893   4.77
 9.04 Intr + 193379 193496  118  1  1   81   79    17 0.256   0.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  70101  70171   71  1  2  110   42    54 0.830   1.10
S.002 Intr - 122061 121957  105  1  0   54   36   149 0.802   6.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_1|302_aa
MAGYDLTTRITHLLDRHLVFPLLEFLSVKEIYKEKELLQGKLDLLSDANMVDFAMDAYKN
LYSDDIPHALKENRTTVVAQLKQLQAETELIVKMFEDPETTRQMRSTRDGRMLFDYLADK
HGFRQEYLDTFYTYAKFQYECGNYSGAAEYLYFFRVLVPATDRNAVSSLWGKLASEILKQ
NWDADMEDLTWLKETIDNNSINFDLDGAKKKLRECESVLVNDFLVACLKDFIDNAHLFIF
ETFCHIHQCISINMLADKLNMTPDETERWIVNVIRNARLDAKIDSKLGHVVMVTMYSHPI
SK

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_1|909_bp
atggcggggtacgacttaactactcgcatcacgcaccttttggatcggcatctagtcttt
ccgctccttgagtttctctctgtaaaggagatatataaagaaaaggaattattacaaggt
aaattggaccttcttagtgatgccaacatggtagactttgctatggatgcatacaaaaac
ctttattctgatgatattcctcatgctttgaaagagaatagaaccacagttgttgcacaa
ctgaaacagcttcaggcagaaacagaactaattgtgaaaatgtttgaagatccagaaacg
acaaggcaaatgcggtcaaccagggatggtaggatgctctttgactacctggcggacaag
catggttttaggcaggagtatttagatacattctacacatatgcaaaattccagtatgaa
tgtgggaattactcaggagcagcagaatatctttattttttcagagtgttggttccagca
acagacagaaatgctgtaagttcactctggggaaagctggcctctgaaatcttaaagcag
aattgggatgcagacatggaagaccttacatggttaaaagagaccatagataataattct
attaactttgacttagatggggctaagaaaaagctgagagaatgtgaatcagtgcttgtg
aacgacttcttggtggcttgtcttaaggatttcattgacaatgcccatctcttcatattt
gagactttctgtcacatccaccagtgtatcagcattaacatgttggcagacaaattgaac
atgactccagatgaaactgaaaggtggattgtaaatgtgattagaaatgcaagactggat
gccaagattgattctaaattaggtcatgtggttatggtaacaatgtactctcaccctatc
agcaagtga

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_2|211_aa
MDKFLDTYTLPRLNQEKTESLNRPITGSEIEPIINSLPTKKVQDQKDSQPNSTRGQKREM
LSAFQRLFRVLFVIETVSEYGVLIFIYGWPFLQTLAMLLIGTVSFHLWIRRNRAPQSAAP
LEENVNRAVSNKAAHGTVRLTWLLVVGGVSPFSRGGCCAHPRGCAPENGQTPPGILLLKE
KHQLSPERALDPRRPSPVLVQLRAVGGIWWL

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_2|636_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaaaaaactgaatcc
ctgaatagaccaataacaggctctgaaattgagccaataattaatagcctaccaaccaaa
aaagtccaggaccagaaggattcacagccgaattctaccagaggccagaaacgcgaaatg
ctgtcggccttccagaggctgttccgagtcttatttgtgattgaaacagtctcagaatac
ggagtcctgatcttcatttatggatggccctttctccagacccttgcgatgctcctgatc
gggacagtgtctttccacctttggatccgcagaaatcgagctccgcagtcagcggctccg
ttggaagagaatgtgaaccgcgctgtctccaacaaagctgctcacggaacagtgcgttta
acttggctgctggtcgtcggaggcgtcagtcccttcagcaggggcggctgctgtgcccac
ccccggggctgtgcgccagagaacggtcagactccgccagggattcttctcctgaaagaa
aagcaccaactatctcccgagcgagctctcgacccacgaaggccctcccccgtgctggtc
cagctgcgtgctgtcggtggcatctggtggctctag

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_3|89_aa
MWYEIKAQVHNIHLCKDKHGKTGLQLQTTNKGLFVQDRIVQWIVTMHKDSTSHGGFIIKK
GKVFPVVKGSSVVLKDSSPTTMCARFKNV

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_3|270_bp
atgtggtatgagatcaaggcccaggtacacaacatccacctgtgcaaagacaaacatggc
aagactgggctgcagctgcagaccaccaacaaggggctctttgtgcaggacaggatagtc
cagtggattgtcaccatgcacaaggacagcacaagccatggtggcttcatcatcaagaag
ggaaaggtcttccctgtggtcaaagggagctctgtggtcctcaaggactcttcaccaacc
accatgtgtgccaggttcaagaacgtttaa

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_4|199_aa
MDSGSWPGPGAGPGRGRGHQAWFALESGLGCEGHKMGTLPARRHIPPWVKVPEDLKDPEV
FQVQTRLLKAIFGPDGSRIPYIEQVSKAMLELKALESSDLTEVVVYGSYLYKLRTKWMLQ
SMAEWHRQRQERAPWASPGVPLASGPSQDPFGNGGPRMPAVGLGDPGTQHHYCYAHFISE
KTEVEEVKGPNTVILKVAP

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_4|600_bp
atggactcagggtcctggcccgggccgggggcggggcctggccgggggcggggccaccag
gcctggtttgcgctggagagtggtcttggttgtgagggtcataagatgggaactctcccg
gcacgtagacatatcccgccgtgggtgaaagttcccgaagacctgaaagatccagaggtg
ttccaggtccagacgcggctgctgaaagccattttcggcccggacggatctcgaatccct
tacatcgagcaggtgagcaaggccatgctcgagctgaaggctctggagtcttcagacctc
accgaggtcgtggtttacggctcctatttgtacaagctccggaccaagtggatgctccag
tccatggctgagtggcaccgccagcgccaggagcgagcaccttgggcgtcaccaggggtg
cccttggcatctgggccttcccaagacccctttgggaatgggggccccagaatgccggcc
gtcggtcttggagacccagggacacaacatcactattgttatgcccattttatcagtgag
aaaactgaagttgaggaagttaagggtcctaataccgtcattctcaaagtggccccttga

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_5|243_aa
MVKTPAGHQRIPGAQSPVPPTGTGRSMDAPRRFPTLVQLMQPKAMPVEVLGHLPKRFSWF
HSEFLKNPKVVRLEVWLVEKIFGRGGERIPHVQGMSQILIHVNRLDPNGEAEILVFGRPS
YQEDTIKMIMNLADYHRQLQAKGSGKALAQDVATQKAETQRSSIEVREAGTQRSVEVREA
GTQRSVEVQEVGTQGSPVEVQEAGTQQSLQAANKSGTQRSPEAASKAVTQRFREDARDPV
TRL

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_5|732_bp
atggttaagactcccgctgggcaccagcggattcctggtgcccagagcccggttcctcct
accgggaccggccgcagcatggacgctcccaggcggtttccgacgctcgtgcaactgatg
cagccaaaagcaatgccagtggaggtgctcggtcacctccctaagcggttctcctggttc
cactctgagttcctgaagaatccgaaggtagttcgccttgaggtttggctggtggaaaag
atcttcggccggggcggagaacgcatcccgcacgtccagggtatgtcccaaatcttgatt
cacgtgaatcgattggaccctaacggcgaggctgagatcttggtatttgggaggccttct
taccaggaggacacaatcaagatgatcatgaacctggctgactatcaccgccagctccag
gcgaaaggctcaggaaaggccctcgcccaggatgtcgccactcagaaggccgagacccag
cggtcttcaatagaagtccgggaggccgggacgcagcgttcggtggaggtccgggaggcc
gggacccagcgttcggtggaagtccaggaggtcgggacacagggttctccggtggaggtg
caggaggccgggacccagcagtctctccaggctgccaacaagtcggggacccagcgatcc
cccgaagctgccagcaaggcagtgacccagcggtttcgcgaggatgcccgggacccagtt
actagattatga

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_6|196_aa
MPGRRLHPLTPTRCEAPPEGAERVEYGKREPELRAWVWKRSCESRLERAPRLLVPVWSMM
LVPLSPSGANRLRPTPWSSCIRIRPWWFPVQELRDPLVFYLEAWLADELFGPDRAIIPEM
EWTSQALLTVDIVDSGNLVEITVFGRPRVQNRVKSMLLCLAWFHREHRARAEKMKHLEKN
LKAHASDPHSPQDPVA

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_6|591_bp
atgccggggcgtcgcttgcacccgctcaccccgacgcggtgcgaggcgccgccggaaggg
gcggagcgggtcgaatatggtaaaagagagcccgagcttcgcgcctgggtctggaagagg
tcttgcgaaagccgcctcgagcgcgctccgcggctgctggtcccagtatggtcgatgatg
ctggtgccgctgagtcccagcggggcaaacagactccggcccactccctggagcagctgc
attcgcatccggccctggtggtttccggtgcaggaactgagagaccctttggtgttctac
ctagaggcatggctggcagacgagctctttggcccagaccgagccataattccagaaatg
gagtggacgagccaggccctgctgacagtggacatagtggactcagggaacctagtcgaa
atcaccgttttcgggcggccccgtgtacagaatcgggtgaagagcatgctcctgtgcctg
gcatggtttcaccgagaacatcgtgcccgagctgagaagatgaaacaccttgagaagaac
ttgaaggcccatgcatcagacccccactctccccaggatcctgttgcttaa

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_7|266_aa
MSHHGGAPKASTWVVASRRSSTVSRAPERRPAEELNRTGPEGYSVGRGGRWRGTSRPPEA
VAAGHEELPLCFALKSHFVGAIIQEQPESLVKIFGSKAMQTKAKAVIDNFVKKLEENYNS
ECGIDLPPIKKNFYKESTATSAMSKVEADSWSVCVYGGGNRDEQIEELKKGVDIIIATPG
RLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSQASDEAT
ALADVLIIALRDSEQSHTQNFGPLKM

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_7|801_bp
atgtcccaccacggaggagctcccaaggcctctacgtgggtcgttgctagtcggcgaagc
tcgacagtgtcccgagcgccagagaggaggccggcggaggagttgaatcgaacaggtcct
gagggatatagtgtcggcagaggtggtcgctggagaggcacctctaggcccccggaggcc
gtggccgctggtcacgaggaactgccgctgtgttttgctttgaagagccactttgttggc
gcgataatacaagaacaaccagaatcattagtcaaaatttttggcagcaaggcaatgcaa
acgaaagcaaaagcagtgatagacaattttgttaaaaagctagaagaaaattacaattca
gaatgcggaattgatttaccaccaattaagaaaaacttttataaagagtccactgccaca
agtgccatgtcaaaagtagaagcagatagttggagtgtttgtgtatatggtggtggaaat
agagatgaacaaatagaagagcttaaaaaaggtgtagatatcataattgcaactcccgga
agattgaatgatctgcaaatgagtaacttcgtcaatctgaagaatataacctacttggtt
ttagatgaagcagacaagatgttggacatgggatttgaaccccagataatgaagattttg
ttagatgtgcgcccagataggcagacagttatgaccagtcaagcctcagatgaggctaca
gcgctggctgacgtcttaattatagccttgagagactctgagcagagccacacccagaat
tttggcccactgaaaatgtga

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_8|403_aa
MQPWHGKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSR
QKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGS
CRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVRRDAAPGASKLRAVLEKLKLSRDDIS
TAAGMVKGVVDHLLLRLKCDSAFRGVGLLNTGSYYEHVKISAPNEFDVMFKLEVPRIQLE
EYSNTRAYYFVKFKRNPKENPLSQFLEGEILSASKMLSKFRKIIKEEINDIKDTDVIMKR
KRGGSPAVTLLISEKISVDITLALESKSSWPASTQEGLRIQNWLSAKVRKQLRLKPFYLV
PKHAKEGNGFQDLYRTFGTYYYWIPGKLKETIKQMNQVINEYC

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_8|1212_bp
atgcagccttggcacggaaaggccatgcagagagcttccgaggccggagccactgccccc
aaggcttccgcacggaatgccaggggcgccccgatggatcccaccgagtctccggctgcc
cccgaggccgccctgcctaaggcgggaaagttcggccccgccaggaagtcgggatcccgg
cagaaaaagagcgccccggacacccaggagaggccgcccgtccgcgcaactggggcccgc
gccaaaaaggcccctcagcgcgcccaggacacgcagccgtctgacgccaccagcgcccct
ggggcagaggggctggagcctcctgcggctcgggagccggctctttccagggctggttct
tgccgccagaggggcgcgcgctgctccacgaagccaagacctccgcccgggccctgggac
gtgcccagccccggcctgccggtctcggcccccattctcgtacggagggatgcggcgcct
ggggcctcgaagctccgggcggttttggagaagttgaagctcagccgcgatgatatctcc
acggcggcggggatggtgaaaggggttgtggaccacctgctgctcagactgaagtgcgac
tccgcgttcagaggcgtcgggctgctgaacaccgggagctactatgagcacgtgaagatt
tctgcacctaatgaatttgatgtcatgtttaaactggaagtccccagaattcaactagaa
gaatattccaacactcgtgcatattactttgtgaaatttaaaagaaatccgaaagaaaat
cctctgagtcagtttttagaaggtgaaatattatcagcttctaagatgctgtcaaagttt
aggaaaatcattaaggaagaaattaacgacattaaagatacagatgtcatcatgaagagg
aaaagaggagggagccctgctgtaacacttcttattagtgaaaaaatatctgtggatata
accctggctttggaatcaaaaagtagctggcctgctagcacccaagaaggcctgcgcatt
caaaactggctttcagcaaaagttaggaagcaactacgactaaagccattttaccttgta
cccaagcatgcaaaggaaggaaatggtttccaagatttatataggacttttggcacctac
tactattggattccagggaaattgaaggagaccataaaacaaatgaaccaagttataaat
gagtattgctga

>gi568815592r:73273111_73473263|GENSCAN_predicted_peptide_9|235_aa
MSQQRVMCFPLQRAYERTCITKIPIPEKQMFIALGMECNPCGKPLNGRMRGACPCGMFYF
RGCGRWVAVSFTKQQFPLARLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARCGSRTLL
LTHRVDTIGQMSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWG
LRAQIDRKLYKQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLX

>gi568815592r:73273111_73473263|GENSCAN_predicted_CDS_9|705_bp
atgagccaacagcgggtgatgtgcttccccctgcagagagcctatgaacggacgtgcatc
accaagattcctatcccagaaaagcagatgttcatagctctgggaatggaatgcaaccct
tgtggaaagcctctaaacggacgcatgaggggcgcctgtccctgtggcatgttctacttc
cgaggctgtggccgttgggtcgcggtttccttcaccaagcagcaatttccgttggcacgg
ttgagcagtgacagcgcggcgccccggactccgcacttcgacgtgatagtcattggtgga
ggacatgccgggactgaggcagccaccgccgccgctcggtgcggctctcggactctgctc
ctcactcaccgcgtggacacgatcggtcagatgtcatgtaatccttcctttggtggcatc
ggaaagggacatttaatgagggaagtagatgccttggatggcctgtgttctcgcatctgt
gaccagtctggtgtacattataaagtattaaaccggcgtaagggaccagctgtgtggggt
ctgagagctcagattgataggaaactctataaacagaacatgcagaaagaaatcttgaat
acaccactgcttactgttcaggagggagctgtagaagatcttattcttacagaaccagag
cctgaacacactgggaaatgccgtgtcagtggggttgttttggnn