GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:29:00

Sequence gi568815592r:166486124_166686477 : 200354 bp : 47.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.18 Intr -   1326   1214  113  1  2   42  101    53 0.117   2.10
 1.17 Intr -   2798   2710   89  1  2   47   86    88 0.267   4.11
 1.16 Intr -   7606   7428  179  1  2   75   90    86 0.319   6.22
 1.15 Intr -  12527  12385  143  0  2   59   89   300 0.720  27.27
 1.14 Intr -  14801  14764   38  1  2   93   72    38 0.729   0.61
 1.13 Intr -  18489  18383  107  0  2  104  100   139 0.977  15.71
 1.12 Intr -  22159  22080   80  2  2   90   83    98 0.410   8.77
 1.11 Intr -  24234  24154   81  1  0   96  115    57 0.960   8.81
 1.10 Intr -  27554  27482   73  2  1  123   41    12 0.216  -1.02
 1.09 Intr -  28455  28321  135  0  0   99   67    55 0.393   5.26
 1.08 Intr -  29039  29014   26  0  2  136   12    37 0.262  -1.36
 1.07 Intr -  29922  29845   78  1  0   62   81    44 0.179   0.62
 1.06 Intr -  34978  34893   86  0  2   96   47    48 0.211   0.96
 1.05 Intr -  36384  36291   94  1  1   35   85    80 0.303   1.42
 1.04 Intr -  45190  45109   82  1  1   74  116   104 0.560  11.01
 1.03 Intr -  52661  52545  117  2  0  105  115   176 0.999  22.66
 1.02 Intr -  54735  54708   28  2  1   96   67     2 0.532  -2.98
 1.01 Init -  57395  57346   50  2  2   82   86    50 0.654   4.62
 1.00 Prom -  71893  71854   40                              -3.46

 2.00 Prom +  72506  72545   40                              -5.46
 2.01 Sngl +  79299  79865  567  2  0   64   44   286 0.674  15.96
 2.02 PlyA +  79909  79914    6                               1.05

 3.04 PlyA -  85991  85986    6                               1.05
 3.03 Term -  86528  86495   34  1  1   93   46    86 0.624   1.96
 3.02 Intr -  87631  87525  107  1  2   25   93   107 0.101   3.91
 3.01 Init -  91389  91339   51  0  0   68   90    43 0.128   3.72
 3.00 Prom -  98412  98373   40                              -4.16

 4.02 PlyA -  98561  98556    6                               1.05
 4.01 Sngl - 100354  99998  357  1  0   56   44   263 0.614  14.76
 4.00 Prom - 102994 102955   40                              -6.96

 5.00 Prom + 107218 107257   40                              -1.96
 5.01 Init + 110909 110994   86  1  2   72   52    81 0.435   3.19
 5.02 Intr + 111633 111706   74  0  2    6   85   140 0.510   4.55
 5.03 Intr + 116229 116513  285  1  0   61   49   109 0.386   1.61
 5.04 Intr + 125693 125787   95  0  2   88   45    49 0.044   0.28
 5.05 Intr + 126401 126567  167  1  2   93   57    33 0.055  -0.54
 5.06 Intr + 130786 130871   86  1  2   57   92    51 0.095   1.86
 5.07 Intr + 132739 132951  213  2  0    5   38   191 0.147   4.49
 5.08 Intr + 139785 139904  120  1  0  109   50    23 0.055   1.07
 5.09 Intr + 140515 140681  167  2  2   94  -11    53 0.072  -4.32
 5.10 Intr + 140721 140890  170  2  2   65   38   184 0.082   9.84
 5.11 Intr + 144411 144554  144  0  0   27   64   190 0.108   9.90
 5.12 Intr + 160079 160168   90  2  0   18  107    88 0.172   2.81
 5.13 Intr + 160849 160966  118  1  1  111   36    51 0.365   2.67
 5.14 Intr + 171360 171435   76  2  1   67   85    31 0.006  -0.21
 5.15 Intr + 189238 189334   97  2  1  119   86    75 0.615   9.47
 5.16 Intr + 190595 190682   88  2  1   94   25    49 0.387  -0.83
 5.17 Term + 192124 192306  183  0  0   84   36   104 0.368   2.34
 5.18 PlyA + 192328 192333    6                               1.05

 6.04 PlyA - 192403 192398    6                               1.05
 6.03 Term - 193890 193475  416  1  2   48   42   158 0.475   2.62
 6.02 Intr - 194447 194313  135  0  0   60   96   101 0.775   8.64
 6.01 Intr - 199818 199680  139  0  1  128   46    68 0.439   6.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:166486124_166686477|GENSCAN_predicted_peptide_1|533_aa
MPSAMEDGNLATRFSNGKPPPAAAWKEEGVVKEIDISHHVKEGFEKADPSQFELLKVLGQ
GSYGKVFLVRKVKGSDAGQLYAMKVLKKATLKVALHQPQSIIEPLTARPSGHQGRLRMLS
PPQRRQLLGLTGHQGLPKAELHPGQPGTAVLEGRHKTSINICMMNIGSVRKGWTTRSKGL
PTVDHIMASSVWHCSSVRQPTGIPEGTPAATLQGHPLACILLPKHLEAPGSPRLSSVPQS
MLPLCPVRTVLTCWLGLRDRVRSKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRG
GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKITDF
GLSKEAIDHDKRAYSFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMATVTPVEKHCVMSV
QLPSQKHRACTRWSFGYISLSPSVPVCSLVSVPIGKESFGVPSLPRAKLGMPQFLSGEAQ
SLLRALFKRNPCNRLVKQFLLVTEHLCMPSVATRRAGDTVSSRGTGDVRAGDT

>gi568815592r:166486124_166686477|GENSCAN_predicted_CDS_1|1599_bp
atgcccagtgctatggaggatggaaatttagccactcgatttagcaatgggaagccacct
ccagcagccgcgtggaaggaagaaggcgtcgtgaaggagatagacatcagccatcatgtg
aaggagggctttgagaaggcagatccttcccagtttgagctgctgaaggttttaggacaa
ggatcctatggaaaggtgttcctggtgaggaaggtgaaggggtccgacgctgggcagctc
tacgccatgaaggtccttaagaaagccaccctaaaagttgcgctgcatcaaccacaaagc
atcatcgagcctctgactgccaggccttcaggtcaccaaggccgtctgcgtatgctcagc
cccccacagagaaggcaactgctggggctcacagggcaccagggtctgcccaaggcagag
ctgcacccgggacagccagggacagcagtgctggaggggagacataagacatcaatcaac
atatgtatgatgaacattggttcagtccggaaaggttggacaactcgaagcaaaggtctt
cccactgtggaccacatcatggcctcatcagtgtggcactgcagctctgtgcgccagccc
actggcatccctgagggtaccccagctgccaccctacagggccatcccttggcctgtatc
ctcctgcccaagcacctggaggctcccgggtcccctcgtttgtcttctgtgccacagtcc
atgctgcccctgtgtccagtgaggacagtgctcacatgctggctgggacttcgggaccga
gtgagatcgaagatggagagagacatcttggcagaagtgaatcaccccttcattgtgaag
cttcattatgcctttcagacggaaggaaagctctacctgatcctggacttcctgcgggga
ggggacctcttcacccggctctccaaagaggtcatgttcacggaggaggatgtcaagttc
tacctggctgagctggccttggctttagaccatctccacagcctggggatcatctacaga
gatctgaagcctgagaacatcctcctggatgaagaggggcacattaagatcacagatttc
ggcctgagtaaggaggccattgaccacgacaagagagcgtactccttctgcgggacgatc
gagtacatggcgcccgaggtggtgaaccggcgaggacacacgcagagtgccgactggtgg
tccttcggcgtgctcatggcaacggtgaccccagttgagaagcactgcgttatgtctgtc
caattaccttcccagaagcatcgggcctgcacccggtggagctttggctacatctccttg
agcccctctgtgcctgtctgcagcctggtctcggtgccgattgggaaagaatcctttgga
gtgccctccctcccccgagccaagctggggatgccgcagttcctcagtggggaggcacag
agtttgctgcgagctctcttcaaacggaacccctgcaaccggctggtaaagcaattcctc
cttgtcaccgagcacctctgcatgccgagcgtggctaccaggagagcaggtgacacagtg
agctcccgtggcactggtgacgtcagagcaggtgacacg

>gi568815592r:166486124_166686477|GENSCAN_predicted_peptide_2|188_aa
MQGSALPGTWLQALLVWLAWAPAASAYSAIHAREQLSPQEPCGPCLGSDRLTCSQPHTLQ
WCRGPVADSANPSVDLTRSWTPGASELAVGPVGLSLILDRAWTWGLWLGRGAPVWANRTA
DGLEDSVTELSASTRDSTWMQRSPLAISGDTTPRSYCSQHCQAATSQEDISNKTKSIFPS
SWTTAMWF

>gi568815592r:166486124_166686477|GENSCAN_predicted_CDS_2|567_bp
atgcaggggtccgccctccctggcacctggctgcaggctttgctggtgtggctggcctgg
gccccggctgcctctgcctacagtgccatccacgctagggaacagctgtccccacaagaa
ccatgtggtccatgtctgggcagtgaccgcctcacttgcagccaaccccacactcttcag
tggtgccgaggtcctgtggcagactcagccaatcccagtgtggacttgactcggtcttgg
acaccgggggccagtgagctagctgttgggccagtggggctcagcctgatactggacaga
gcctggacctggggcctgtggctggggaggggtgctcctgtgtgggccaacaggacggcc
gatggcctggaagacagtgtgaccgagctatcagctagcactcgggactccacatggatg
cagaggtcaccgctggccatttcaggagacactacgcctaggagctactgcagccagcac
tgccaggcagcgacatcacaggaggacatttctaacaaaacaaaaagcatcttcccatct
tcgtggacaactgccatgtggttctga

>gi568815592r:166486124_166686477|GENSCAN_predicted_peptide_3|63_aa
MISIDSTSHFRVMLMQEPMDSRLQAYATRLWKRTSVFTVTTLAVNGSKCSKGRPYDQWSV
EEL

>gi568815592r:166486124_166686477|GENSCAN_predicted_CDS_3|192_bp
atgatctccattgactccacatctcacttccgggtcatgctgatgcaagagccaatggac
tcgaggctgcaagcttatgccaccaggctctggaagagaacctcggtgtttacggtcacg
accctggcagtcaatgggagtaagtgcagcaaaggccggccatatgaccagtggagcgtg
gaggagctgtaa

>gi568815592r:166486124_166686477|GENSCAN_predicted_peptide_4|118_aa
MTDTAEAVPNFEEMFASRFTENDKEYQEYLKRPPESPPIVEEWNSRAGGNQRNRGNRLQD
NRQFRGRDNRWGWPSDNRSNQWHGRSWGNNYPQHRQEPYYPQQYGHYGYNQRPPYGYY

>gi568815592r:166486124_166686477|GENSCAN_predicted_CDS_4|357_bp
atgactgacactgccgaagctgttccaaattttgaagagatgtttgctagtagattcaca
gaaaatgacaaggagtatcaggaatacctgaaacgccctcctgagtctcctccaattgtt
gaggaatggaatagcagagctggtgggaaccaaagaaacagaggcaatcggttgcaagac
aacagacagttcagaggcagggacaacagatgggggtggccaagtgacaatcgatccaat
cagtggcatggacgatcctggggtaacaactacccgcaacacagacaagaaccttactat
ccccagcaatatggacattatggttacaaccagcggcctccttacggttactactga

>gi568815592r:166486124_166686477|GENSCAN_predicted_peptide_5|752_aa
MGTDGERTRGGATDAENQPMVFTHENETKDKKYPMGDGIIEKRIETDFRSPRAGIYPREP
PPTPAPTVLKGWMHKIIHGSTALRNTRRKQQASSPRATDTGLLAQSDEIPRRSKHRNQAL
PISMDTAHECNLEQDAFMHTRDDSIYMTPTGQGSQVTSYLTILGHILNPELIPVTRKVPW
TRARKGEMMSSELGPCCPTASTNPAHLTEVRHCFAEPVGCAPFITLSGRLLLPMLGCAKA
PNTQEEEEQMNVGERTEPRRFMGPGRHQDRGLDAYNPERHTGRCAQEPCAYGLRLTPSDS
PTSPVRMGSNRCHQIRAPALCIWAPIDAIRFAHEPCLSMVTEPMSVSNIMAAGTKKTKMK
HLRLFQLKQTNQNPTGDHPTPRAASGGETSWKCSGGGVAPARTHGPPNYYGVPAITFGAV
WFDFRNRTSFPGWRGGLGRPRPAQCPAPARPEGGRITSSRLRLELLERDFLRRYTEKNLR
TANFFMLRITRVTWCWPSAKAGSRAFPEYQHSKALPITGILLDAPETVSSQYEGGSLSDH
VESLDRFHMDQLLTPWLQNRSGGWERLTPSPPDLLPQFRATGPKASVDVLQALPGKNYST
NICISKKRNTSSLPETNDTEPLWEPGEGGVAQPAISQPWSCPSFHAVNQLPLKMFVAQSY
LQSTYHTLLRTLLPTSTYSRSTRFKLPSIYMFVGLNPLCSSRGSSTLILAQNISHPPDWA
STLHGEPNHGKAGFHKPPCKPTDRRRLPSTTA

>gi568815592r:166486124_166686477|GENSCAN_predicted_CDS_5|2259_bp
atgggaacagatggagaaaggacacggggaggggccacagatgctgagaaccagcccatg
gtgttcacccacgaaaacgagaccaaagacaagaaatatccaatgggtgacggcatcatc
gagaagagaatagaaacagatttccggagtccacgggctggtatatacccgagagaacct
cccccaacacctgcccctacggtgctcaagggatggatgcacaagatcattcatggcagc
actgctctcagaaacaccagaaggaaacaacaagcatccagccccagggcaactgacaca
ggactgttggcacagtcagatgaaataccacgcagaagcaaacataggaaccaagcgcta
cccatcagcatggatacagctcatgaatgcaacctggaacaagacgcattcatgcataca
cgagatgactccatttatatgacacccactgggcagggatctcaggttacatcctatttg
accatcttgggccacattctcaaccctgagctcatccctgtgaccaggaaagtgccatgg
accagggcgaggaaaggagaaatgatgagctctgagctggggccttgctgcccgactgcc
tccactaatcctgctcatctgaccgaggtcagacactgctttgcagagcccgtgggctgt
gctccatttatcactctgtccgggcgtctgttgttacccatgctcgggtgcgccaaggcc
cctaacacccaagaggaagaggaacaaatgaatgtgggagaaagaactgagcccagaagg
ttcatgggtccaggaagacatcaggacagaggtctagacgcttacaaccctgagagacac
actggacgctgcgcgcaagagccctgtgcatatggactccgattgacgccatcagattcg
cccacaagccctgtgcgtatgggctccaatcgatgccatcagattcgcgcaccagccctg
tgcatatgggctcccatcgatgccatcagattcgcgcacgagccctgtctctcaatggtt
acagaacccatgtctgtgtctaatatcatggcagctgggacaaagaaaaccaagatgaaa
catttgagattgttccagctgaaacaaaccaaccaaaaccccacaggggaccatcccaca
ccccgtgcagccagcggcggagaaaccagctggaaatgcagtgggggtggagttgccccc
gcgaggacccacggaccgcccaattactacggagtcccagcgataacgtttggagccgtt
tggttcgattttcggaaccggaccagctttccagggtggcgaggcgggctcgggcgacca
cggcccgctcagtgcccggcacctgcgcgccccgagggcggccgcattacctcgagccgg
ctcaggctggagctcttggagcgcgacttcctgcgcaggtacacagagaagaacctgcgc
acggcgaacttcttcatgctcaggatcaccagggtcacctggtgctggccatctgcgaaa
gcaggaagtcgtgcttttccggagtatcagcattcgaaggctctgcccatcacaggcatc
ctgctggatgctccagagacagtgtccagccagtacgagggagggagtctctcagatcac
gtggaatctcttgatcggttccacatggaccagcttctgacaccctggctgcagaacaga
agcggcggctgggagaggctgacgcccagccctccagacctcctaccccagttcagagcc
acaggtcccaaagcctccgtggatgtcctccaggcactgccagggaagaattattccaca
aatatctgtatatcaaaaaagaggaatacgtcctcattgcctgaaactaacgacacggaa
cccttgtgggaaccaggggagggaggtgttgcccaacctgccatctctcagccctggtcc
tgccccagtttccacgctgttaatcagctgcctttaaagatgttcgtggcacagtcgtac
ctgcaaagcacttaccacactctgctgcgaacactgctcccaacgtctacatattcacgc
tcaaccagatttaaacttccttcaatctacatgtttgtgggtctaaatcctctctgctcc
tcacgaggctcttccacgcttatcctggctcagaacatctctcatccccctgactgggcc
tccaccctccacggggaaccaaatcatgggaaagctggattccacaagccgccctgcaag
cccactgaccgcagaaggttgccttctacaacagcttag

>gi568815592r:166486124_166686477|GENSCAN_predicted_peptide_6|229_aa
GMGPSSITMVHCLRDHSMVGVKSSDVDTMEIEAQTQLSRGARQQGGGVKLQTFVEMLQFT
KAAQTQKVGTSKIYYKEQKNKPSTTWKGTRAARQKNSPSPHPSQKPSWLHLSLALPRDFA
APSPGTPAAQRELVPHQAQQALANRAECGACRAALTWNPRQPVSTTRNPSSRPRRSLHTS
PPAERAGSGLGQPQRWAPTAQQRAEGLLERGQIEERRQVEEVPRASQGC

>gi568815592r:166486124_166686477|GENSCAN_predicted_CDS_6|690_bp
ggcatgggcccatcgtccatcaccatggtgcattgtctgcgggatcactcgatggtagga
gttaaaagcagtgatgtagataccatggagatagaggcacagacccagcttagccgggga
gcaaggcagcaaggaggtggagtgaagctgcaaaccttcgtggagatgttacagttcaca
aaagcggcacagacccaaaaagtgggcaccagcaagatttactacaaagagcaaaaaaac
aaaccttccacaacgtggaaggggaccagagcagctagacagaaaaattctccaagtccc
cacccatcccagaagcccagctggcttcacctctcactggcactgccgagggactttgcg
gcacctagtccaggtactcctgcagcccagagggagctcgtcccccatcaagcccagcag
gcgctggccaaccgcgctgagtgcggggcttgccgagccgcgctcacctggaacccgcgc
cagccagtgagcaccactcgcaaccccagctcccgcccgcgccgctccctccacacctcc
ccaccagcagagagagccggctccggcctcggccagccccagagatgggcccccacagca
cagcagcgggctgaagggctcctcgagcgcggccagatcgaggagcgccgccaggttgag
gaggtgccgagagcgagccagggctgctag