GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:36:35

Sequence gi568815592r:146702798_146903709 : 200912 bp : 37.35% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  14086  14272  187  2  1   88   89   111 0.786   9.03
 1.02 Intr +  16314  16419  106  0  1   68   83    37 0.810   0.50
 1.03 Intr +  18606  18708  103  2  1   71   94    79 0.989   5.63
 1.04 Intr +  21389  21530  142  0  1   60   51   125 0.874   4.49
 1.05 Intr +  23286  23400  115  0  1   88  100    87 0.822   9.43
 1.06 Intr +  25777  25944  168  0  0   65   98   170 0.995  14.92
 1.07 Intr +  26342  26457  116  1  2   69   80    55 0.294   1.13
 1.08 Intr +  28653  28690   38  0  2   73  105   -22 0.217  -5.01
 1.09 Intr +  31096  31233  138  2  0   78   80    99 0.954   7.61
 1.10 Intr +  33701  33794   94  0  1   72   98    52 0.948   2.70
 1.11 Intr +  37662  37796  135  0  0   81   94    66 0.903   5.26
 1.12 Intr +  38321  38474  154  2  1   24  100    56 0.697  -0.45
 1.13 Intr +  43125  43312  188  2  2   83   87    73 0.547   4.27
 1.14 Intr +  49733  49917  185  2  2  130   84   117 0.729  14.01
 1.15 Intr +  61104  61303  200  1  2   98   76   137 0.704  11.65
 1.16 Intr +  66223  66334  112  0  1   89   95    50 0.577   4.83
 1.17 Intr +  79223  79395  173  0  2  100   94   110 0.997  11.54
 1.18 Intr +  81821  81997  177  1  0   28   36   204 0.997   8.39
 1.19 Intr +  82813  82915  103  0  1   90  113    92 0.999  10.73
 1.20 Intr +  85592  85813  222  0  0   16   88   211 0.470  11.08
 1.21 Intr +  98386  98482   97  2  1   49  123   151 0.943  12.85
 1.22 Intr +  99031  99214  184  1  1   18  109   223 0.998  16.27
 1.23 Term + 104605 104790  186  0  0   36   41   230 0.927   9.61
 1.24 PlyA + 104988 104993    6                               1.05

 2.00 Prom + 109431 109470   40                              -4.65
 2.01 Init + 109805 109819   15  1  0   88   66    15 0.909  -0.45
 2.02 Term + 112235 112420  186  1  0   37   41   246 0.964  11.31
 2.03 PlyA + 112618 112623    6                               1.05

 3.05 PlyA - 113145 113140    6                               1.05
 3.04 Term - 117715 117522  194  2  2   31   53   183 0.237   5.70
 3.03 Intr - 121213 121089  125  0  2   46   92    77 0.016   3.21
 3.02 Intr - 138336 138256   81  2  0   65   99    70 0.011   3.63
 3.01 Init - 138503 138478   26  2  2   64   98    -1 0.011  -2.87
 3.00 Prom - 139563 139524   40                              -5.05

 4.11 PlyA - 139700 139695    6                               1.05
 4.10 Term - 142640 142173  468  2  0   32   42   317 0.924  15.49
 4.09 Intr - 142985 142802  184  1  1   46   85   160 0.383  10.37
 4.08 Intr - 151012 150934   79  2  1   78   75    27 0.250  -1.91
 4.07 Intr - 151173 151095   79  0  1   60   93   135 0.168   9.41
 4.06 Intr - 152619 152453  167  1  2   35   67    31 0.002  -5.54
 4.05 Intr - 155079 154881  199  0  1   48   48   168 0.005   6.80
 4.04 Intr - 157232 157210   23  0  2   69   98     2 0.004  -4.36
 4.03 Intr - 158097 157947  151  0  1  115   41   102 0.055   7.01
 4.02 Intr - 161805 161673  133  2  1   57   82    68 0.338   2.83
 4.01 Init - 175364 175318   47  2  2   78  115    14 0.298   3.31
 4.00 Prom - 181926 181887   40                              -4.25

 5.00 Prom + 189098 189137   40                              -3.05
 5.01 Init + 191796 191966  171  2  0   82   73   127 0.840  10.09
 5.02 Term + 193243 193464  222  0  0   24   33   146 0.495  -1.37
 5.03 PlyA + 200190 200195    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 130961 131112  152  0  2   89   53    88 0.952   2.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:146702798_146903709|GENSCAN_predicted_peptide_1|1107_aa
XTDEQTDFGLGDAHQSDGLNLEREIVSQTTATQEKSQEELPTTNNSVSKEIWLDFEDFCV
CFHKPCERDTITIILHLRKMKQIKCEITYVKHLEECLLFSEERVSYYLFVDSLKPIELLV
CFSALVRWGEYGALTKDSPPIEPGLLTAETFSWKSLKPGSLVLKIHTYATKATVVRLPVG
RHMLLFNAYSPVGHSIHICSMVSFVIGDEHVVLPNFEPESCRFTEQSLLIMKAIGNVIAN
FKDKGKLSAALKDLQTAHYPVPFHDKELTAQHFRAEQHSSFTGSLEGVKQRDFLVTPSQG
TYGPVHCSCTKTRWPCFAASSSCLPVEWLDVKYCMPTSDKEYSAEEVAAAIKIQAMWRGT
YVRLLMKARIPDTKENISVADTLQKVWAVLEMNLEQYAVSLLRLMFKSKCKSLESYPCYQ
DEETKIAFADYTVTYQEQPPNSWFIVFRETFLVHQDMILVPKVYTTLPICILHIVNNDTM
EQVPKVFQKVVPYLYTKNKKGYTFVAEAFTGDTYVAASRWKLRLIGSSAPLPCLSRDSPC
NSFAIKEIRDYYIPNDKKILFRYSVKVLTPQPATIQVRTSKPDAFIKLQVLENEETMVSS
TGKGQAIIPAFHFLKSEKGLSSQSSKHILSFHSASKKEQEVYVKKKAAQGIQKSPKGRAV
SAIQDIGLPLVEEETTSTPTREDSSSTPLQNYKYIIQCSVLYNSWPLTESQLTFVQALKD
LKKSNTKAYGERHEELINLGSPDSHTISEGQKSSVTSKTTRKGKEKSSEKEKTAKEKQAP
RFEPQISTVHPQQEDPNKPYWILRLVTEHNESELFEVKKDTERADEIRAMKQAWETTEPG
RAIKASQARLHYLSGFIKKTSDAESPPISESQTKPKEEVETAARGVKEPNSKNSAGSESK
EMTQTGSGSAVWKKWQLTKGLRDVAKSTSSESGGVSSPGKEEREQSTRKENIQTGPRTRS
PTILETSPRLIRKALEFMDLSQYVRKTDTDPLLQTDELNQQQAMQKAEEIHQFRQHRTRV
LSIRNIDQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLEALSA
QEAAMKLETEKMTPAPDTQKKKKGKKK

>gi568815592r:146702798_146903709|GENSCAN_predicted_CDS_1|3324_bp
ngcacagatgaacaaacagactttggattgggtgatgctcatcagagtgatggattaaac
ttggaaagagagatagtcagccagaccacagcaacacaggaaaagtcacaggaagaactt
ccaacaacaaataatagtgtttctaaagaaatatggttagattttgaagatttctgtgta
tgctttcacaaaccctgtgaaagagatactattaccatcattttacatctaaggaaaatg
aagcagatcaaatgtgaaataacatatgtaaaacacttagaagaatgcctattattctca
gaagaacgagtgtcctactatctatttgtagatagtctaaaacctattgaactactggtt
tgcttttctgcattggtacgctggggggagtatggagccttaacaaaagacagtcctccc
atagagcctggacttctcacagctgaaacgttttcttggaaatccctgaaaccaggcagt
cttgttctgaagattcacacatatgctaccaaggctacagtggttcgtctgcctgttggg
agacacatgctactcttcaacgcatactccccagtaggacactccatacacatctgcagc
atggtgtcatttgtcattggggatgaacacgttgtactgcccaactttgaaccagagagc
tgccgatttacggaacagtctctgttgattatgaaagctattggaaatgtgattgctaat
ttcaaagataagggtaaactctctgcagctttgaaggatctgcaaacagctcactaccct
gtccccttccatgataaagaactaactgcacagcacttcagggctgagcagcattctagc
ttcacaggcagccttgagggggtgaagcaaagagacttcctggtaaccccttcacaaggc
acatatggacctgtccactgcagctgcactaaaaccagatggccttgttttgcagccagt
tctagttgtttacctgtggaatggctggacgttaaatattgtatgcccacaagtgataaa
gagtattctgctgaggaagtagcagcagcaattaaaattcaagccatgtggagaggaact
tacgttagattgcttatgaaagccagaataccagacacaaaagaaaatatcagtgttgca
gatactcttcaaaaagtttgggctgtattggaaatgaatttagaacagtatgcagtttct
ctcttaagactaatgtttaaaagcaagtgcaagtctttggaatcttatccatgctatcaa
gatgaagaaactaagattgcttttgcagattatactgtgacttatcaagaacagccacca
aattcttggtttatagtattcagagaaacatttttggttcatcaagacatgattttggtt
cccaaagtatatactacacttccaatctgtatcctacacattgttaataatgacacaatg
gagcaagtgccaaaggtgttccaaaaagtggtgccttatctttataccaagaataagaag
ggatacacttttgtggcggaagcatttacaggcgacacatatgtagcagcctcacgatgg
aaactgcgtctcatcggttcttctgctccactgccatgcctctctcgagactctccatgc
aattcctttgccataaaggaaatccgagattactacatacccaatgataagaaaatttta
ttcaggtattcggttaaagttctaacaccacaacctgctacaatacaggtacgcacatcc
aaaccagatgcattcatcaagctgcaggtcctagaaaatgaagaaactatggtgagctcc
actggaaaaggccaagctataatcccagcatttcacttcttgaagagtgagaaaggtttg
agctcccagtctagcaagcacattctttcatttcactctgcatccaagaaagagcaagaa
gtgtatgttaagaagaaagctgctcagggaattcagaaatcccccaagggtagagctgta
agtgcaatacaagacattggtctaccccttgtggaggaggaaactaccagtacacccact
agagaagacagttccagcacaccactgcagaattacaagtatattatacagtgttcggtg
ttgtataacagttggcctctcactgaaagccagctgacatttgttcaagcactgaaagac
ttaaagaaaagtaataccaaagcttatggtgaaagacacgaggagttaattaacttagga
agcccagactcccacactattagtgagggacaaaaatcttcagtaacttccaaaacaaca
aggaaaggcaaagaaaagtcttctgagaaagaaaagacagccaaagaaaaacaagcacct
cgctttgagcctcagatatccactgttcaccctcaacaagaagacccaaataaaccctac
tggattttgaggttggtcactgaacacaatgaatcagaattatttgaagtgaaaaaggat
acagaaagggcagatgaaatccgagccatgaaacaagcctgggagacaactgagccagga
agagcaatcaaggcttctcaggctcgtttgcattaccttagcgggttcattaagaaaaca
tctgatgctgagagtccgcctatatctgaaagccaaactaaaccaaaagaagaagtagaa
acagctgcacgtggcgtaaaagaaccaaactcaaagaattctgcaggttcagagagcaaa
gagatgacacaaacaggatcagggagtgcggtgtggaagaagtggcaattgaccaaaggc
ttgagggatgtggcaaaatccacgagtagcgaaagtggaggagtgtcttcaccagggaaa
gaagagcgcgagcagagcacacggaaggaaaacattcaaacaggacctcgtacacgatct
ccaacaattttggaaacatctccacgacttattcgaaaagcactagaatttatggattta
agtcaatatgttcggaaaacagatacagatcctctgctgcaaacagatgaattgaatcag
cagcaggcaatgcaaaaggcggaagaaattcatcagtttcgacagcataggaccagagtc
cttagcattcgaaacattgaccaagaagagcggttgaagttaaaggatgaagtcctggat
atgtataaggaaatgcaggactccttagatgaagcccgacagaaaattttcgacatccgg
gaagagtacagaaacaaattgctggaagctgagcacctaaagctggaagctctctctgct
caggaagccgccatgaagctggagacagaaaagatgaccccagctcctgacacacagaaa
aaaaagaaaggaaagaaaaagtaa

>gi568815592r:146702798_146903709|GENSCAN_predicted_peptide_2|66_aa
MQTSQDSLDEARQKIFDIREEYRNKLLEAEHLKLETLAAQEAAMKLETEKMTPAPDTQKK
KKGKKK

>gi568815592r:146702798_146903709|GENSCAN_predicted_CDS_2|201_bp
atgcagacatctcaggactccttagatgaagcccgacagaaaattttcgacatccgggaa
gagtacagaaacaaattgctggaagctgagcacctaaagctggaaactctggctgctcag
gaagcagccatgaagctggagacagaaaagatgaccccagctcctgacacacagaaaaaa
aagaaaggaaagaaaaagtaa

>gi568815592r:146702798_146903709|GENSCAN_predicted_peptide_3|141_aa
MPLLFWTPREEETGSRECFNVETLNSFHTSAFWGHRDYFYHLKGKPMSSEQEHCFLCPYT
SPEKGQLDLEVLEGLKRVEDLGNHRTQVQAITQVSWGTVSSPRAAQVGHHWLGVPGLQSD
REKENPASVVVAQIKTISRII

>gi568815592r:146702798_146903709|GENSCAN_predicted_CDS_3|426_bp
atgcctctcttgttttggactccaagggaagaagagactgggtcacgggaatgctttaat
gtggaaaccctgaattcgttccacacatctgccttctggggacacagggattatttctat
catctcaaaggcaagcctatgtcttcagaacaagaacactgttttctctgcccttatacc
agcccagagaagggacagcttgatcttgaagtacttgaagggctgaaaagagtagaagat
cttgggaaccacagaacacaagtacaagctataacacaggtgagctggggcacagtatca
tccccgagagcggcccaggtagggcatcactggctgggggtccctggcttgcaaagcgac
cgagaaaaagaaaatcctgcctctgtagttgtggcccaaataaagacaatcagcaggatt
atctga

>gi568815592r:146702798_146903709|GENSCAN_predicted_peptide_4|509_aa
MGKIITNKGLLRPFICVTGSWFMLSLKFDLLNISRKTLSGEYRSSEQLSTDFVIRLPFQK
RPVHYEGSAVLASLQAINGSCPAVAQTPGHSPQGQKPVEGAVIVIYFSLAGSCCFHMQLP
AARSASQPETQLSSFQDFMGRMTIPESPCSPLGKWATWAPDVRVFSGLRPASASLAREPA
PSSLLYGKRLASKISVSKKGTNRKMKDSVLIRILQRDRTNKIDVYMNGSLLRSIDSHDHK
MVKALLSDVGCESLVVLDLQLPGSGKVAMDYMSIFPKNHIWKPKSPQYDGICRDLWNFEL
ERDDLGYLAEEIFKQQSIQEEAEHKSLKNLLVDNAVVKKNPFSGEKFKPAAEICPGDLVP
CIPDTPAVAKSGQVTACAVASEGVDPKPWQLTHGVGPVAAQKSRIKLWKRPPRFLRMYGN
TCMSRQMCAAGAEPSRRTSARAVWKGDVGLEPPHRVTTGVRPSRAVRRGSLSSRSQNGRS
IDSLHCAPRKAIDTQCHSETEARMGSYTL

>gi568815592r:146702798_146903709|GENSCAN_predicted_CDS_4|1530_bp
atggggaaaataattactaataaaggcctactacggccttttatatgtgtaactggatct
tggttcatgctgagcttaaaatttgatcttctgaatatcagcagaaagactctttctggt
gaatacagatcttctgagcaattatcgactgactttgtcattagactgccctttcagaag
aggccagttcactatgagggctctgctgtccttgccagccttcaagcaatcaacggctct
tgtccagcagtggctcaaactcctggccattcaccccagggacagaagccagtggaggga
gcagtcattgttatttacttttcattggcaggttcctgctgctttcacatgcagctgcca
gctgcacgcagcgcaagtcaaccagaaactcaactaagcagtttccaggatttcatggga
aggatgacgattcctgagagtccttgctcgcctctggggaaatgggccacttgggcccca
gatgtgcgggtcttttccggactcaggcctgcgtcagcatccttggcccgcgagcctgcg
ccctcatcgttgctatatgggaagagactggcttctaaaataagtgtaagcaagaaggga
accaacagaaaaatgaaggacagtgtattaatcaggattctccagagggacaggactaat
aagatagatgtatatatgaatgggagtttattaaggagtattgactcacatgatcacaag
atggtcaaagctctcctgtcggatgttggttgtgaatctttggtggtccttgacctgcag
ctccctggaagtgggaaagttgctatggactacatgtctattttccccaagaatcatata
tggaagcctaaatctccccagtatgatggtatctgcagagatctatggaactttgaactt
gagagagatgatttagggtatctggcagaagaaatttttaagcagcaaagcattcaagag
gaagcagagcataaaagtttgaaaaatttgctggtagacaatgcagtagtaaagaaaaac
ccattttctggggagaaattcaagccagcagcagaaatttgccctggggacttggtgccc
tgcatcccagacactccagctgtggctaaaagcggccaagttacagcttgtgctgtggct
tcagagggtgtggaccccaagccttggcagcttacacatggtgttgggcctgtggctgca
cagaagtcaagaattaagctttggaaacgtccacctagatttctgaggatgtatggaaac
acctgcatgtctaggcagatgtgtgctgccggggcagagccctcaaggaggacctctgcg
agggcagtatggaagggagatgtgggattggagcccccacacagagtcaccactggggta
cggcctagtagagctgtgagaagagggtcactgtcttccagatcccagaatggtagatcc
attgacagcctgcactgtgcacctagaaaagccatagacactcaatgccattctgagaca
gaagccaggatggggagctataccctgtaa

>gi568815592r:146702798_146903709|GENSCAN_predicted_peptide_5|130_aa
MGIMGSNPIRKKKEFDEQKDRGLVEGLNFLTGWMNAICGPHRLRKLRMQDTDQRMALNIS
SREYYKQLACERKYIKEPCKKQRKVGSSEGVHNAVNILKVSCQGIRVLNLGEKHSVLSQC
PMKVQSSTSS

>gi568815592r:146702798_146903709|GENSCAN_predicted_CDS_5|393_bp
atgggtatcatgggatctaaccccattagaaagaagaaggagtttgatgaacagaaagac
agaggactagtggagggactgaacttcttgacagggtggatgaatgcaatctgtggacct
catagactgagaaagctaagaatgcaggacactgatcagagaatggccttgaacatttcc
tcacgtgagtattataagcaacttgcatgcgaaagaaaatacatcaaagagccatgcaag
aagcaaagaaaagtaggaagctcagaaggtgtccataatgctgtaaatattttaaaggtc
agctgccagggtattcgtgttttgaatctaggggaaaaacacagtgtgttgtcacagtgc
cccatgaaagtgcaaagcagcacgtcttcctag