GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:03:02

Sequence gi568815592r:106968707_107198755 : 230049 bp : 45.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1151   1146    6                               1.05
 1.03 Term -   4030   3870  161  2  2   77   49    44 0.500  -2.50
 1.02 Intr -   5120   4964  157  2  1   43  102   107 0.943   7.18
 1.01 Init -   5940   5872   69  0  0   96   94   197 0.930  20.15
 1.00 Prom -   6062   6023   40                              -4.06

 2.00 Prom +  11824  11863   40                              -3.86
 2.01 Init +  43390  43578  189  0  0   60   62   263 0.930  19.91
 2.02 Intr +  45381  45503  123  2  0  102   77    51 0.753   6.18
 2.03 Intr +  59387  59565  179  1  2   43  109    16 0.041  -2.08
 2.04 Intr +  71303  71524  222  2  0   31   87   174 0.161   8.84
 2.05 Intr +  75554  75626   73  2  1   75   93    28 0.936   1.41
 2.06 Term +  82351  82530  180  0  0  120   36   129 0.960   8.51
 2.07 PlyA +  82610  82615    6                               1.05

 3.06 PlyA -  82891  82886    6                               1.05
 3.05 Term - 102244  99998 2247  1  0   84   49  4695 0.002 450.58
 3.04 Intr - 102571 102502   70  0  1  125   39    47 0.001   2.68
 3.03 Intr - 108873 108719  155  0  2   89   33    53 0.003  -1.23
 3.02 Intr - 130047 129845  203  1  2   69   78   266 0.623  22.70
 3.01 Init - 130579 130543   37  1  1   57   93    62 0.956   3.77
 3.00 Prom - 139076 139037   40                              -5.66

 4.02 PlyA - 139358 139353    6                               1.05
 4.01 Sngl - 145982 145548  435  2  0  110   53   198 0.953  12.77
 4.00 Prom - 152367 152328   40                              -3.16

 5.04 PlyA - 154925 154920    6                               1.05
 5.03 Term - 186071 185913  159  2  0   90   44   132 0.913   6.94
 5.02 Intr - 190564 190497   68  2  2  117   60    15 0.527   0.22
 5.01 Init - 195768 195693   76  0  1   83   82    21 0.539   2.25
 5.00 Prom - 195945 195906   40                              -2.46

 6.02 PlyA - 196229 196224    6                              -0.45
 6.01 Sngl - 197393 196278 1116  2  0   58   47   370 0.739  26.68
 6.00 Prom - 199169 199130   40                              -2.16

 7.03 PlyA - 199647 199642    6                               1.05
 7.02 Term - 200597 199875  723  2  0  -33   43   323 0.072   9.18
 7.01 Intr - 225148 225116   33  1  0  113  102    32 0.932   5.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 102229  99998 2232  1  0   85   49  4683 0.968 457.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_1|128_aa
MGRAMVARLGLGLLLLALLLPTQRGLPRSSIRGTSPRVRVPGAAQRCLEGVWMHRAGERD
RGLGLGDPSGGGGEEVRAENSDLPLFHDKGEIITCPTGLCISWLEKSVVNDATQTLGHWE
NLGSWPQQ

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_1|387_bp
atgggcagagcaatggtggccaggctcgggctggggctgctgctgctggcactgctccta
cccacgcagcgcggtctccctagatcctccatccggggaacctcgccccgggtgcgggta
cccggggccgcgcagcgctgcctcgagggtgtatggatgcaccgcgccggcgagagagac
cgggggctgggcctgggagaccctagcgggggcgggggcgaagaagtgagggctgaaaac
tccgatctgcctttgttccatgacaaaggagagattatcacgtgccctactggactgtgc
atttcgtggcttgaaaaatcagtggtgaatgatgccactcagacgctgggacactgggag
aaccttggttcttggccacagcaatga

>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_2|321_aa
MKKFCKGDESLEDEEHSGRPLEVDNDQLRAIIEGDPLTTTGEVAEELNVNHSTVVQHLKC
IGKATEQYVYVAQGLETPVLYRRVDVFSHCQPTSPLTECSKGSVSSKTRPPAGVAASLPP
WPRAPPDPLSLRRRRRKGRGADRGSLEACSPRGRGEGREGLTYRLKSNIRSTKSTKKSLQ
KVDEEDSDEESHHDEMSEQEEELEDDPTVVKNYKDLEKAVQSFRYDVVLKTGLDIGRNKV
EDAFYKGELRLNEEKLWKKSRTVKVGDTLDLLIGEDKEAGTETVMRILLKKVFEEKTESE
KYRVVLRRWKSLKLPKKRMSK

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_2|966_bp
atgaagaagttttgcaaaggagatgagagccttgaagatgaggagcatagtggccggcca
ttggaagttgacaacgaccaattgagagcaatcatcgaaggtgatcctcttacaactaca
ggagaagttgctgaagaactcaacgtcaaccattctacagttgttcagcatttaaagtgc
attggaaaggccacagagcagtacgtgtatgtggcccaggggttggagactcctgtgtta
tatagacgtgttgatgtgttttctcattgccaacccacttcacccctcacagaatgcagc
aagggcagcgtgtcctccaagacgcggcctccagcaggggtcgctgcttcgctgccgccc
tggcctcgcgccccgcccgacccgctctcactgcgccggcgccggcggaaggggcggggc
gcagataggggtagcctggaggcctgcagtccgcgcggccgcggggagggacgagagggc
ctgacgtacagactcaaaagtaatataaggtctacaaaatctactaaaaagtctctgcaa
aaagtagatgaagaggactctgatgaagaaagccatcatgatgagatgagtgagcaggaa
gaggagcttgaggatgatcctactgtagtcaaaaactataaagacctggaaaaagcagtt
cagtcttttcggtatgatgttgtcctgaagacggggctagatattgggagaaacaaagtg
gaagatgctttctacaaaggtgaactcaggctgaatgaggaaaaattatggaagaaaagc
agaacggtgaaagtgggagatacattggatcttctcattggagaggataaagaagcagga
acagagacagttatgcggattctcttgaaaaaagtgtttgaagagaagactgaaagtgaa
aaatacagagtggtgttacggcggtggaaaagtttaaagttgcctaagaagagaatgtct
aaataa

>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_3|903_aa
MNSTEFTEDVEEVLKSITVKVETEAEDAALDCSVNSRTSEKHSVDSVLTALQDSSKRKQL
VSDGLLDSVPGVKRRRLIPENLVSSAILAHPSPLPYSVGSRRMTHRVRAVRAETVSGLIL
GGHRIDAELSEGVLAQYCQHQCQPSDGKEVHCWCPALLAGMRNRENSSPCQGNGEQAGRG
RSLGNVWPGEEEPCNDATTPSYKKPLYGISHKIMEKKNPPSGDLLNVYELFEKANASNSP
SSLRLLNEPQKRDCGSTGAGTDNDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVS
RIKKQVSPTEMVAKFQPPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFPELFSDVDFS
RGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREM
EDSQPSGQVASFFEAEQVDPGHFLDNKDQEEALSLDRSSTIASDHVVDTQDLTEFLDEAS
SPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEE
EAWLQQCAQRINDELEGLGLDAGSEGDPPRDDCYDSSSLPDDISVVKVEDSFEGERPGRR
SKKIWLVPIDFDKLEIPQPDFEVPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPEL
FTHENLRKQYNCSGSLGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRR
RDTEQRRSYQQQRKVHVPGPECRDLTSYAINPERFREEFEGPPLPPERSSKDFCKIPLDE
LVVPSPDFPVPSPYLLSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSG
ACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKK
VEK

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_3|2712_bp
atgaactcaactgaattcaccgaagatgtagaagaagttctaaaaagtatcactgtgaaa
gtggagacagaggctgaagatgctgctctggactgctccgtgaattccaggacttctgag
aagcactctgtggacagcgtcctcactgccctgcaggactccagcaaacgaaagcagctg
gtcagcgatggcctgctagactctgtccccggcgtgaagaggaggcggctgatccccgag
aatcttgtttcttcggccatcttagcacatccttcacccttaccatatagtgttggcagc
agaaggatgacccacagagtaagagccgtgagagcagagactgtgtctggcttgatcctg
ggaggtcaccgtattgatgctgaacttagtgagggagttcttgcccagtattgccagcat
cagtgtcagccctctgacggaaaggaagtccactgctggtgccctgctctcctagcaggc
atgcggaaccgtgagaacagctcgccctgccaaggcaatggtgagcaggccggcaggggc
aggagcctgggcaatgtgtggcctggagaggaggagccctgcaacgatgccaccacccct
tcctacaagaagcctctgtatggcatctcgcacaagatcatggagaagaagaatcctccc
tcgggggacctgctaaacgtgtacgagctctttgagaaggcaaacgccagcaacagcccc
tcgtcactgcggctcctgaatgagccacagaagcgggactgtggcagcaccggggcaggc
actgacaacgaccccaacatctacttcctgatccagaagatgttctacatgctgaacacc
ctcacgtccaacatgtcccagctgcacagcaaggtggacctgctctcccttgaggtgagc
cgcatcaagaagcaggtgagccccactgagatggtggccaaattccagccgccccctgag
taccagctcacagccgcagagctcaagcagatcgtggaccagagcctgtcagggggggac
ctggcctgccgcttgctggtgcagctcttccccgagctcttcagcgacgtggacttctcc
cggggctgcagtgcctgtggctttgcggccaagcgcaagctggagtcgctgcacctgcag
ctcatccgcaactatgtggaggtctactacccctcggtgaaggacacggctgtgtggcag
gccgagtgcctgccccagctgaacgacttcttcagccgcttctgggcccagcgggaaatg
gaggacagccagcccagcggccaggtcgccagcttctttgaggcagagcaggtggacccc
ggccacttcctggacaacaaagaccaggaggaggccctgtctcttgaccggagcagcacc
atcgcctcagaccacgtggtggacacgcaggacctcactgagttcctggacgaagcctcc
tcaccaggcgagtttgccgtcttcctcctccaccggctcttccccgagctcttcgaccac
cgcaagctgggtgaacagtacagctgctacggggacggtggaaagcaggagctggacccg
cagcggctgcagatcatccgcaactacacggagatctacttccctgacatgcaggaggag
gaggcctggctgcagcagtgtgcccagcgcatcaacgacgagctcgagggcctggggctg
gacgcgggcagtgaaggcgaccccccgcgtgatgactgctacgactcctccagtctgccc
gacgacatctcagtggtcaaggtggaggacagcttcgagggcgagcggccgggtcgccgc
tccaagaagatctggctggtgcccatcgacttcgacaagttagagatcccccagcctgac
ttcgaggtgcccggtgccgactgcctgctcagcaaggagcagctacgcagcatctacgag
agcagcctgtccatcggcaacttcgcctcgcgcctgctggtgcacctgttccccgagctc
ttcacgcacgagaacctgcgcaagcagtacaactgcagcggctccctgggcaagaagcag
ctggacccctcccgcatcaagctcatccgccactacgtgcagctgctctacccacgcgcc
aaaaacgaccgcgtctggaccctggagttcgtgggcaaactggatgagcgctgccggcgc
cgggacacggagcaaaggcgctcctaccagcagcagcgcaaggtccacgtgccgggccct
gagtgcagagacttgaccagctatgcaatcaaccccgagaggttccgggaggagtttgag
gggcccccactgccccccgagaggagcagcaaggacttttgcaagatccccttggacgag
ctggtggtcccctcgcctgacttcccggtgccttctccctacctgctgtctgacaaggag
gtgcgtgagatcgtgcagcagagcctctccgtgggcaactttgccgcccggctcctcgtc
cgcctgtttcccgaactcttcaccgccgagaacctccggctgcagtacaaccattccggg
gcttgcaacaagaagcaactggaccccacgcggctgcggctcatccgccactacgtggaa
gccgtctacccggtggagaagatggaggaggtgtggcactacgaatgtatccccagcatc
gatgagaggtgccgccgccccaacaggaaaaaatgcgacatcctcaagaaagcaaagaaa
gtggagaagtga

>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_4|144_aa
MERPGRPEGSAVLAAAWRSRSAGLWRGTARRVEGGVGAGAGGGDWREMPGGEREAGGAAA
RRNEASGGCKWSEAGPRRRRPGAERDGPRRQGAQRSLPGRSTAVRGSRCPGAGGGPGALG
VHPGWREAWPAGRKAEAWGARRSS

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_4|435_bp
atggagcggccggggcggccggaaggctctgccgtactcgcggcggcttggcgctcgcgc
tcggcggggctttggcggggcactgctcggcgtgtggaagggggtgtcggagcgggagca
gggggcggggactggagggagatgccgggcggcgagcgggaggccgggggagcagccgct
cggaggaacgaagcctccggaggctgcaaatggagcgaggccggcccgcggcggcggcgg
ccgggagcggagagggatgggccccgccgccagggggcgcagcgctcccttcccggccgt
tccacggcggttcgcggttcccgctgcccaggagctggaggcgggcccggcgccttgggt
gtgcacccgggctggcgcgaggcctggccggccggccgcaaagctgaagcctggggcgct
cgccgctcctcgtga

>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_5|100_aa
MDETGNRHSQQTVTRMKNQTLHVLTDCSDPSPVSFEVIVYHVKIDLILLRERIKAGKGVT
SAIDLCRYHGNKALEALESFPPSEARSALENIVFAVTRFS

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_5|303_bp
atggatgaaaccggaaaccgtcattctcagcaaactgtcacaaggatgaaaaaccaaaca
ctgcatgttctcactgactgctctgatccaagtccagttagctttgaggttattgtatat
cacgtcaaaatagacttgatcttgttgcgagaaagaatcaaagctggcaaaggtgtgact
tcagctattgacctgtgtcgttaccatggaaacaaggcactggaggccctggagagcttt
cctccctcggaggccagatctgctttagaaaacattgtgtttgctgtgaccagattttca
tga

>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_6|371_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKIKVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIVKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKRACIAKTILSQKNKAGGIMLPDFKLYYKAKV
TKTAWYWYQNRDTDQWNRTEPSEIIPHIYNHLIFDKPDKTKKWVKDSLFNKWCWENWLAI
CRKLKLDPFLTLYTKINSRWIKDLNVRPKTIKTLEENLGNAIQDIGTGKDFMSKTPKAMA
TKAKIDKWDLIKLKSFCTAKETTIRVNGQPTEWEKIFPIYSSDKGLISRIYKELKQIYKK
KTTPSKSGRRI

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_6|1116_bp
atgattgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaaagtgcaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggaa
aactacaaaccactgctcaacgaaataaaagaagacacaaacaaatggaagaacattcca
tgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcctgcattgccaagacaatcctaagccaa
aagaacaaagctggaggcatcatgctacctgatttcaaactatactacaaggctaaagta
accaaaacagcatggtactggtaccaaaacagagatacagaccaatggaacagaacagag
ccctcagaaataataccacacatctacaaccatctgatctttgacaaacctgacaaaacc
aagaaatgggtaaaggattccctatttaataaatggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttcctcacactttatacaaaaattaattcaagatgg
attaaagatttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaat
gccattcaggacataggcacgggcaaggacttcatgtctaaaacaccaaaagcaatggca
acaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaa
gaaactaccatcagagtgaacgggcaaccgacagaatgggagaaaatttttccaatctac
tcatctgacaaagggctaatatccagaatctacaaagaactcaaacaaatttacaagaaa
aaaacaaccccatcaaaaagtgggcgaaggatatga

>gi568815592r:106968707_107198755|GENSCAN_predicted_peptide_7|251_aa
AQEKGRLDYAKNYVTNAQASVADSIKWKKGYQVIEDQMNEMKREEKFREKRGKINKQSLR
EIWDYVKRPNLRLIGVPESDRENGTKLENTLQDIIQENFPNLARQASIQIQEIQRTPQRY
SSRRATPRRIIVRFTKVEMKEKMLRAAREKGRVTHKGKPIRLTADLSAETLQARREWGAI
FNILKEKNFQPRISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALKELLKEALNMERNN
RYQPLQKHVKL

>gi568815592r:106968707_107198755|GENSCAN_predicted_CDS_7|756_bp
gctcaagaaaaaggaagattggactatgctaagaactacgtgacgaatgcacaagcttca
gtagccgactcgatcaagtggaagaaagggtatcaagtgattgaagatcaaatgaatgaa
atgaagcgagaagagaagtttagagaaaaaagaggaaaaataaacaaacaaagcctccga
gaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgac
agggaaaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttcccc
aacctagcgaggcaggccagcattcaaattcaggaaatacagagaacgccacaaagatac
tcctcgagaagagcaactccaagacgcataattgtcagattcaccaaagttgaaatgaag
gaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatc
agactaacagcggatctctcggcagaaaccctacaagccaggagagagtggggggcaata
ttcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagc
ttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtc
accaccaggcctgccctaaaagagctcctgaaggaagcactaaacatggaaaggaacaac
cggtaccagccactgcaaaaacatgtcaaattgtaa