GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:55:57

Sequence gi568815592r:106871664_107074646 : 202983 bp : 44.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  12217  12275   59  2  2  110   36   111 0.762   5.95
 1.02 PlyA +  12297  12302    6                               1.05

 2.00 Prom +  17552  17591   40                              -4.56
 2.01 Init +  28190  28265   76  1  1   41   81    49 0.099   0.75
 2.02 Intr +  32748  32928  181  1  1   74   58    67 0.082   1.23
 2.03 Intr +  41491  41618  128  1  2   89   96    23 0.014   3.52
 2.04 Intr +  46612  46687   76  2  1   68   74    39 0.120  -0.93
 2.05 Term +  53761  53956  196  1  1   96   36   133 0.119   5.78
 2.06 PlyA +  56184  56189    6                               1.05

 3.02 PlyA -  57556  57551    6                               1.05
 3.01 Sngl -  60383  60063  321  2  0  103   44   294 0.690  22.49
 3.00 Prom -  62244  62205   40                              -5.56

 4.00 Prom +  65029  65068   40                              -2.16
 4.01 Init +  72809  73026  218  1  2   55   15   147 0.537   2.27
 4.02 Intr +  73094  73221  128  2  2   55   95    68 0.515   4.52
 4.03 Term +  87543  87661  119  1  2   63   46    82 0.128   0.20
 4.04 PlyA +  89203  89208    6                               1.05

 5.04 PlyA -  89484  89479    6                               1.05
 5.03 Term - 101073 100913  161  1  2   77   49    44 0.470  -2.50
 5.02 Intr - 102163 102007  157  1  1   43  102   107 0.943   7.18
 5.01 Init - 102983 102915   69  2  0   96   94   197 0.930  20.15
 5.00 Prom - 103105 103066   40                              -4.06

 6.00 Prom + 108867 108906   40                              -3.86
 6.01 Init + 140433 140621  189  2  0   60   62   263 0.930  19.91
 6.02 Intr + 142424 142546  123  1  0  102   77    51 0.753   6.18
 6.03 Intr + 156430 156608  179  0  2   43  109    16 0.041  -2.08
 6.04 Intr + 168346 168567  222  1  0   31   87   174 0.161   8.84
 6.05 Intr + 172597 172669   73  1  1   75   93    28 0.936   1.41
 6.06 Term + 179394 179573  180  2  0  120   36   129 0.960   8.51
 6.07 PlyA + 179653 179658    6                               1.05

 7.02 PlyA - 179934 179929    6                               1.05
 7.01 Sngl - 199272 197041 2232  0  0   85   49  4683 0.935 457.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_1|19_aa
XPEKPVAEKLLAQLVLISP

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_1|60_bp
nggcctgagaaacctgtggctgagaagctgctggcccagctggtcctcatcagcccataa

>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_2|218_aa
MDNRKLLLTVLEAEKSKIKAPDSVSATPPQTMTTSTFQTLKPKPVIFSMTSAFIPTSNSS
GNPVGPTLQIYPESDHFSPPPGLLPIILSSNTTFSKCLKQKGSVCLLWEQQLIMGWGSLK
EEGKPEEQAIAERSSCQCQKETGGLGNMLAQRSRKSLLTPNTEEEQGEEEEEKEKEKEKE
KEWRRRRKKEKGRRNSSGRKRKKGKGEDILKINWILLA

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_2|657_bp
atggacaacagaaagttattgctcacagttctagaggctgagaagtccaagatcaaggca
ccagattcagtgtctgccacccctcctcagacgatgacaacttcaaccttccagacactt
aagccaaaacccgtgatattctccatgacatctgccttcattccaacatcaaattcatca
ggaaatcctgtaggccctaccttgcaaatatatccagaatctgaccacttctcaccacca
ccagggctcctccccattatactttccagtaacacaaccttttcaaaatgcctaaagcaa
aaaggatctgtgtgtttgctttgggaacaacagttaatcatgggctggggcagcctgaaa
gaagaaggaaaacctgaggaacaggccattgcggagagaagcagctgccagtgtcaaaag
gaaacaggtggccttgggaacatgcttgctcagaggagtcggaaaagtttgctaactcct
aatacagaagaagaacaaggagaagaggaggaggaaaaagagaaggaaaaagagaaagaa
aaagaatggaggagaagaaggaagaaagaaaaaggaaggaggaatagctcagggaggaag
agaaagaagggaaaaggagaagacattctgaaaataaattggattctcttggcataa

>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_3|106_aa
MPKRKAEGDAKGDKAKGKDEPQGRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKV
DAGKEGNSPAENGDAKTDQAQKAEGAGDAKRSVWIFDNCTYGDCTV

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_3|321_bp
atgcccaagagaaaggctgaaggggatgctaaaggggataaagccaaagggaaggatgaa
ccacagggaagatctgcgaggttgtctgctaaacctgctcctccaaagccagagcccaag
cctaaaaaggcccctgcaaagaagggagagaaggtacccaaagggaaaaaggggaaagtt
gatgctggcaaggaggggaatagccctgcagaaaatggagatgccaaaacagaccaggca
cagaaagctgaaggtgctggagatgccaagcgaagtgtgtggatttttgataactgtacg
tatggtgactgtacagtttga

>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_4|154_aa
MVDAARFEFLHMEMEAELWDHKPNPVHGGTEDKPVDPGEHGFLCEPGSRRETAPEDARLR
EELGVLKFICKNLTTASTPHPDDLGPGFTCGLLHGTLSTLGMESLVTASVASLTTSNRRA
KLQDLVKENPPNSHRGNANAVTKSKEPPDMGFVG

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_4|465_bp
atggtggatgctgcacggttcgagtttctacacatggagatggaagcagagctgtgggat
cacaaacccaaccctgtccatggcgggacagaagataagcctgttgatcctggagagcat
ggatttctgtgtgagccaggttctaggcgagagactgcccctgaagatgctcgtctcagg
gaggagctgggtgtcctcaagttcatatgcaaaaatctgacaacagcttccactcctcat
cccgatgatctggggcctggattcacttgtggcctcctgcatggcaccctcagtaccctg
ggcatggagagtttggtcactgcctctgtggcatccctgaccacctcgaacagaagagcc
aaactccaggatcttgtcaaagagaaccctccaaactctcatagaggaaatgctaatgca
gtgaccaagagcaaggagccacccgacatgggcttcgtagggtga

>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_5|128_aa
MGRAMVARLGLGLLLLALLLPTQRGLPRSSIRGTSPRVRVPGAAQRCLEGVWMHRAGERD
RGLGLGDPSGGGGEEVRAENSDLPLFHDKGEIITCPTGLCISWLEKSVVNDATQTLGHWE
NLGSWPQQ

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_5|387_bp
atgggcagagcaatggtggccaggctcgggctggggctgctgctgctggcactgctccta
cccacgcagcgcggtctccctagatcctccatccggggaacctcgccccgggtgcgggta
cccggggccgcgcagcgctgcctcgagggtgtatggatgcaccgcgccggcgagagagac
cgggggctgggcctgggagaccctagcgggggcgggggcgaagaagtgagggctgaaaac
tccgatctgcctttgttccatgacaaaggagagattatcacgtgccctactggactgtgc
atttcgtggcttgaaaaatcagtggtgaatgatgccactcagacgctgggacactgggag
aaccttggttcttggccacagcaatga

>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_6|321_aa
MKKFCKGDESLEDEEHSGRPLEVDNDQLRAIIEGDPLTTTGEVAEELNVNHSTVVQHLKC
IGKATEQYVYVAQGLETPVLYRRVDVFSHCQPTSPLTECSKGSVSSKTRPPAGVAASLPP
WPRAPPDPLSLRRRRRKGRGADRGSLEACSPRGRGEGREGLTYRLKSNIRSTKSTKKSLQ
KVDEEDSDEESHHDEMSEQEEELEDDPTVVKNYKDLEKAVQSFRYDVVLKTGLDIGRNKV
EDAFYKGELRLNEEKLWKKSRTVKVGDTLDLLIGEDKEAGTETVMRILLKKVFEEKTESE
KYRVVLRRWKSLKLPKKRMSK

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_6|966_bp
atgaagaagttttgcaaaggagatgagagccttgaagatgaggagcatagtggccggcca
ttggaagttgacaacgaccaattgagagcaatcatcgaaggtgatcctcttacaactaca
ggagaagttgctgaagaactcaacgtcaaccattctacagttgttcagcatttaaagtgc
attggaaaggccacagagcagtacgtgtatgtggcccaggggttggagactcctgtgtta
tatagacgtgttgatgtgttttctcattgccaacccacttcacccctcacagaatgcagc
aagggcagcgtgtcctccaagacgcggcctccagcaggggtcgctgcttcgctgccgccc
tggcctcgcgccccgcccgacccgctctcactgcgccggcgccggcggaaggggcggggc
gcagataggggtagcctggaggcctgcagtccgcgcggccgcggggagggacgagagggc
ctgacgtacagactcaaaagtaatataaggtctacaaaatctactaaaaagtctctgcaa
aaagtagatgaagaggactctgatgaagaaagccatcatgatgagatgagtgagcaggaa
gaggagcttgaggatgatcctactgtagtcaaaaactataaagacctggaaaaagcagtt
cagtcttttcggtatgatgttgtcctgaagacggggctagatattgggagaaacaaagtg
gaagatgctttctacaaaggtgaactcaggctgaatgaggaaaaattatggaagaaaagc
agaacggtgaaagtgggagatacattggatcttctcattggagaggataaagaagcagga
acagagacagttatgcggattctcttgaaaaaagtgtttgaagagaagactgaaagtgaa
aaatacagagtggtgttacggcggtggaaaagtttaaagttgcctaagaagagaatgtct
aaataa

>gi568815592r:106871664_107074646|GENSCAN_predicted_peptide_7|743_aa
MRNRENSSPCQGNGEQAGRGRSLGNVWPGEEEPCNDATTPSYKKPLYGISHKIMEKKNPP
SGDLLNVYELFEKANASNSPSSLRLLNEPQKRDCGSTGAGTDNDPNIYFLIQKMFYMLNT
LTSNMSQLHSKVDLLSLEVSRIKKQVSPTEMVAKFQPPPEYQLTAAELKQIVDQSLSGGD
LACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQ
AECLPQLNDFFSRFWAQREMEDSQPSGQVASFFEAEQVDPGHFLDNKDQEEALSLDRSST
IASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDP
QRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLDAGSEGDPPRDDCYDSSSLP
DDISVVKVEDSFEGERPGRRSKKIWLVPIDFDKLEIPQPDFEVPGADCLLSKEQLRSIYE
SSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPSRIKLIRHYVQLLYPRA
KNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKVHVPGPECRDLTSYAINPERFREEFE
GPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYLLSDKEVREIVQQSLSVGNFAARLLV
RLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSI
DERCRRPNRKKCDILKKAKKVEK

>gi568815592r:106871664_107074646|GENSCAN_predicted_CDS_7|2232_bp
atgcggaaccgtgagaacagctcgccctgccaaggcaatggtgagcaggccggcaggggc
aggagcctgggcaatgtgtggcctggagaggaggagccctgcaacgatgccaccacccct
tcctacaagaagcctctgtatggcatctcgcacaagatcatggagaagaagaatcctccc
tcgggggacctgctaaacgtgtacgagctctttgagaaggcaaacgccagcaacagcccc
tcgtcactgcggctcctgaatgagccacagaagcgggactgtggcagcaccggggcaggc
actgacaacgaccccaacatctacttcctgatccagaagatgttctacatgctgaacacc
ctcacgtccaacatgtcccagctgcacagcaaggtggacctgctctcccttgaggtgagc
cgcatcaagaagcaggtgagccccactgagatggtggccaaattccagccgccccctgag
taccagctcacagccgcagagctcaagcagatcgtggaccagagcctgtcagggggggac
ctggcctgccgcttgctggtgcagctcttccccgagctcttcagcgacgtggacttctcc
cggggctgcagtgcctgtggctttgcggccaagcgcaagctggagtcgctgcacctgcag
ctcatccgcaactatgtggaggtctactacccctcggtgaaggacacggctgtgtggcag
gccgagtgcctgccccagctgaacgacttcttcagccgcttctgggcccagcgggaaatg
gaggacagccagcccagcggccaggtcgccagcttctttgaggcagagcaggtggacccc
ggccacttcctggacaacaaagaccaggaggaggccctgtctcttgaccggagcagcacc
atcgcctcagaccacgtggtggacacgcaggacctcactgagttcctggacgaagcctcc
tcaccaggcgagtttgccgtcttcctcctccaccggctcttccccgagctcttcgaccac
cgcaagctgggtgaacagtacagctgctacggggacggtggaaagcaggagctggacccg
cagcggctgcagatcatccgcaactacacggagatctacttccctgacatgcaggaggag
gaggcctggctgcagcagtgtgcccagcgcatcaacgacgagctcgagggcctggggctg
gacgcgggcagtgaaggcgaccccccgcgtgatgactgctacgactcctccagtctgccc
gacgacatctcagtggtcaaggtggaggacagcttcgagggcgagcggccgggtcgccgc
tccaagaagatctggctggtgcccatcgacttcgacaagttagagatcccccagcctgac
ttcgaggtgcccggtgccgactgcctgctcagcaaggagcagctacgcagcatctacgag
agcagcctgtccatcggcaacttcgcctcgcgcctgctggtgcacctgttccccgagctc
ttcacgcacgagaacctgcgcaagcagtacaactgcagcggctccctgggcaagaagcag
ctggacccctcccgcatcaagctcatccgccactacgtgcagctgctctacccacgcgcc
aaaaacgaccgcgtctggaccctggagttcgtgggcaaactggatgagcgctgccggcgc
cgggacacggagcaaaggcgctcctaccagcagcagcgcaaggtccacgtgccgggccct
gagtgcagagacttgaccagctatgcaatcaaccccgagaggttccgggaggagtttgag
gggcccccactgccccccgagaggagcagcaaggacttttgcaagatccccttggacgag
ctggtggtcccctcgcctgacttcccggtgccttctccctacctgctgtctgacaaggag
gtgcgtgagatcgtgcagcagagcctctccgtgggcaactttgccgcccggctcctcgtc
cgcctgtttcccgaactcttcaccgccgagaacctccggctgcagtacaaccattccggg
gcttgcaacaagaagcaactggaccccacgcggctgcggctcatccgccactacgtggaa
gccgtctacccggtggagaagatggaggaggtgtggcactacgaatgtatccccagcatc
gatgagaggtgccgccgccccaacaggaaaaaatgcgacatcctcaagaaagcaaagaaa
gtggagaagtga