GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:39:36

Sequence gi568815592f:88980895_89184193 : 203299 bp : 42.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1420   1584  165  0  0  106   57    54 0.265   3.34
 1.02 Intr +  64724  64831  108  1  0   63   64    90 0.797   3.66
 1.03 Intr +  68922  69038  117  2  0  102    9   143 0.073   7.54
 1.04 Intr +  84275  84448  174  1  0   42   66   121 0.068   4.51
 1.05 Term +  85094  85330  237  1  0   19   48   235 0.071   7.78
 1.06 PlyA +  87098  87103    6                               1.05

 2.00 Prom +  94702  94741   40                              -5.35
 2.01 Init +  95506  95566   61  0  1   63   73    52 0.264   2.67
 2.02 Intr +  99903 100079  177  1  0   57   17   130 0.547   1.77
 2.03 Intr + 100185 100540  356  1  2  120   78   206 0.524  16.88
 2.04 Term + 102859 103302  444  0  0  102   33   224 0.998  12.55
 2.05 PlyA + 106788 106793    6                               1.05

 3.06 PlyA - 108744 108739    6                               1.05
 3.05 Term - 118053 117893  161  1  2   69   49   121 0.084   3.42
 3.04 Intr - 124320 124225   96  1  0   12   70   133 0.592   2.96
 3.03 Intr - 124644 124533  112  0  1   53  106   150 0.977  12.33
 3.02 Intr - 125897 125787  111  2  0   38   76    85 0.599   1.96
 3.01 Init - 126765 126754   12  0  0   53   60    -6 0.162  -6.44
 3.00 Prom - 127924 127885   40                              -7.05

 4.00 Prom + 128672 128711   40                              -3.95
 4.01 Init + 132066 132076   11  2  2   60   91    16 0.317  -2.33
 4.02 Intr + 136915 137440  526  1  1   68   44   254 0.457  11.02
 4.03 Intr + 138031 138147  117  0  0   69   54   133 0.200   7.74
 4.04 Term + 159761 160003  243  1  0   76   38   175 0.410   6.22
 4.05 PlyA + 162748 162753    6                               1.05

 5.00 Prom + 163362 163401   40                              -2.95
 5.01 Init + 165251 165715  465  1  0   93  100   425 0.599  39.89
 5.02 Intr + 168371 168519  149  1  2   82   61   166 0.961  11.41
 5.03 Intr + 172149 172291  143  0  2   82   60    82 0.950   3.88
 5.04 Intr + 173854 174008  155  2  2   76   61    72 0.934   2.17
 5.05 Intr + 177431 177566  136  1  1   63   91    73 0.948   4.32
 5.06 Intr + 180534 180740  207  1  0  -19  105   117 0.593   0.83
 5.07 Intr + 180889 180996  108  2  0   61  119   143 0.999  14.04
 5.08 Term + 181215 181369  155  1  2   74   42   228 0.998  13.90
 5.09 PlyA + 183851 183856    6                               1.05

 6.05 PlyA - 183967 183962    6                               1.05
 6.04 Term - 197669 197553  117  2  0   32   41   100 0.740  -2.74
 6.03 Intr - 198169 197981  189  1  0   86   47   155 0.952  10.06
 6.02 Intr - 199594 199398  197  2  2  103   57   302 0.991  26.81
 6.01 Intr - 201163 201011  153  2  0  108   82    44 0.748   4.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  85437  85347   91  0  1   78  101    69 0.815   7.90
S.002 Sngl - 118067 117684  384  2  0   51   47   205 0.808   8.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:88980895_89184193|GENSCAN_predicted_peptide_1|266_aa
VQKLSSASQPTTLWEKASFVGLETLLLKPSLSRYTYNHSSPRLCKGAGPGIPNSRAFVSL
CEKHGPEVPSSSRCPCSSNEDVKPWRWKSMMVLAEQHAEAYVLPTTITNLDVVVEAMSLM
RSLKMSGKNKTHRNPWRRGKAQAWRAAARASPTNAAPCSRAPSPIDRPRAEECECMAQDW
QAAPPTAPVCSFTPEASETTSPPGGTNNSRRAALRAVTLTAKVCSFTPEPARLRTHQKEE
TPNTSEHQKEQTPDATFGVNKLQTPP

>gi568815592f:88980895_89184193|GENSCAN_predicted_CDS_1|801_bp
gtccagaagctctcttctgcttctcaaccaaccacactgtgggaaaaggcaagttttgta
ggactggaaaccctgttgctcaagccttctctttctagatacacctataatcattcttct
ccaaggctctgcaaaggagcggggcctggaatcccaaactctagggcttttgtgtccctg
tgtgagaaacatggaccagaagtgccatcaagttctcgctgtccctgttcttcaaatgag
gacgtgaagccatggagatggaaaagtatgatggtgcttgcagaacagcacgcagaagct
tatgtactgcccacaacaatcaccaacttggacgtggtagttgaagcaatgagtcttatg
aggtccctcaagatgagcgggaagaacaaaactcacaggaacccatggaggcgggggaag
gctcaggcatggcgggctgcagcccgagcctccccgacaaatgccgccccctgctccagg
gcgcccagtcccatcgaccgcccaagggctgaggagtgcgagtgcatggcgcaggactgg
caggcagctccacctacagccccggtctgcagcttcactcctgaagccagtgaaaccacg
agcccaccaggaggaacgaacaactccagacgcgccgccttaagagctgtaacactcact
gcgaaggtctgtagcttcactcctgaaccagcgagactacgaacccaccagaaggaagaa
actccgaacacatccgaacatcagaaggaacaaactccagacgcgacctttggagttaac
aaactccaaactccaccttaa

>gi568815592f:88980895_89184193|GENSCAN_predicted_peptide_2|345_aa
MRQLGRMRCENLLNARGGGCSSPSSIHRRHPIFTGFIHLLLLSSLLSDKLPSAMTVVSVP
QREPLVLGGRLAPLGFSSRGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKV
RASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASP
DLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHGQLVHGIHLYEQPKINRQKSKYNLPL
TKITSAKRNENNFWQDSVSSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKENYAGA
KFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKVQT

>gi568815592f:88980895_89184193|GENSCAN_predicted_CDS_2|1038_bp
atgcgccagctagggaggatgaggtgtgagaatctcctgaacgccagaggtggaggctgc
agctctcctagcagcatccatcgccgccaccctatcttcactggcttcattcaccttctc
cttctctcttcgttgctgagcgacaagcttcctagcgctatgactgtcgtctccgtcccg
cagcgggagccgctcgtcctgggtggccgccttgcgccgcttggcttttcctcccgaggg
ggagatggcccgtgtctgaccccccagcctcgcgctccagcagctctgcccaaccgcagc
ctcgccgtggcgggaggcactcctcgggcagcgccgaagaagcggcgaaagaagaaggtg
cgggccagccccgcagggcagctgcccagccgcttccaccagtaccagcagcaccggccg
agtctggagggcggccggagccccgcgaccggcccgagcggagcgcaggaggtcccgggc
ccggccgccgccttggccccgagtcctgcagccgcagccggcacggagggagccagcccc
gaccttgccccgctgcggcccgcggctcccggccaaacccccctcaggaaagaggtttta
aaatcaaagatgggaaaatcggagaaaattgcccttccccatggccagcttgttcatggt
atacacttgtatgagcaaccaaagataaacagacagaaaagcaaatataacttgccacta
accaagatcacctctgcaaaaagaaatgaaaacaacttttggcaggattctgtttcatct
gacagaattcagaagcaggaaaaaaagccttttaaaaataccgagaacattaaaaattcg
catttgaagaaatcagcatttctaactgaagtgagccaaaaggaaaattatgctggggca
aagtttagtgatccaccttctcctagtgttcttccaaagcctcctagtcactggatggga
agcactgttgaaaattccaaccaaaacagggagctgatggcagtacacttaaaaacgctc
ctcaaagttcaaacttag

>gi568815592f:88980895_89184193|GENSCAN_predicted_peptide_3|163_aa
MLTQSSRVKAKSDFVGSASLIKSILQALKSKGQGSRSSDIELVIFEDVRDAEDALYNLNR
KWVCGRQIEIQFAQGDRKMITGDQEAPAKEELEVEVLHGEEIGGGQTALKSLDTGDFLIA
SLNLVPNHYQGGLPQQGSQELQEGILALEDGQGPSPYKRGPSQ

>gi568815592f:88980895_89184193|GENSCAN_predicted_CDS_3|492_bp
atgctcactcagagttccagagtcaaagccaagtctgattttgttggttctgcgtctctt
ataaagtccatcttgcaagccttaaagagtaaaggtcaaggttcaagatcaagtgacatt
gagctagtcatatttgaagatgttcgagatgctgaagatgctctttataacctcaataga
aagtgggtatgtggccgtcagattgaaatacagtttgcacaaggtgatcgcaaaatgatc
acaggagatcaagaagccccagccaaagaagaactcgaagtagaagttcttcatggggaa
gaaataggaggcggtcagacagccttaaagagtctcgacacaggcgattttcttatagcc
agtctaaatctcgttccaaatcattaccaaggcggtctacctcagcaaggcagtcaagaa
ctccaagaaggaattttggctctagaggacggtcaaggtccaagtccttacaaaagaggt
ccaagtcaatag

>gi568815592f:88980895_89184193|GENSCAN_predicted_peptide_4|298_aa
MLYSRGRSPGGVRDVPDEQGGVGGPRVARHDRFLRSLRVCPRPLDSLRLPLPLLPPQELR
RPPARPPPLGLSPASAQPQRPAQRGRSAAPAWTHGPGAGAAPARPRGRGNSEDRSAAVPR
PYGIRVWGVLECDGIWGGGGEGQCMSGGRRPRGGLRPRRGRRGLEDPEVVAGLRLGGGGL
DSSSPCSCGRQAQPVIQGWECNQATPKCEECPFSLAEVCCFVHTVGNQGKGKAYPLRTSL
SSFPGIVMENRAANLTAKRREAKGSLRSSGTRTFRALKSLPSLCGPFEEIRTELENEL

>gi568815592f:88980895_89184193|GENSCAN_predicted_CDS_4|897_bp
atgctgtacagccgcggccgttcacctggtggcgtccgcgacgttcctgatgaacaggga
ggtgttggggggcctcgtgtagcgagacatgaccgcttcctccgttccctccgggtctgc
ccgcggccgctggactcgctccgtctcccgctaccgctgctaccaccacaggagctccgc
cggcccccggcgcgacccccacccctcggcctcagccccgccagcgcgcagccgcagagg
ccggcgcagagggggcgcagcgcggcgccagcctggacgcacgggccgggggcgggggcg
gcgccggcgcggcccaggggccgcgggaattccgaagacaggagcgcggccgttcccagg
ccctatgggatccgggtatggggggtcctggagtgcgacgggatttggggagggggcggc
gagggccagtgtatgtcaggagggcggaggccaagagggggcttgaggccgcggcgggga
cgccgggggttagaggacccagaggtggtggcggggctgcggctgggcggaggtgggtta
gactcgtcttcgccttgctcctgtggccggcaggcacagcctgttattcagggctgggag
tgtaaccaggcaactcctaagtgtgaagagtgccccttttcgctcgcagaagtgtgttgt
tttgtacacactgtggggaatcagggcaaaggaaaagcctatcctctcagaacctccctg
tcctcatttccaggaatagtgatggagaacagagcagctaatctcactgccaagagaagg
gaagccaaagggagcctcaggtcatcaggtaccaggacattcagggctttaaagtcactg
ccttcactttgtgggccatttgaagaaatccgcacagaacttgaaaacgagttgtaa

>gi568815592f:88980895_89184193|GENSCAN_predicted_peptide_5|505_aa
MRPGGERPVEGGACNGRSELELLKLRSAECIDEAAERLGALSRAIWSQPELAYEEHHAHR
VLTHFFEREPPAASWAVQPHYQLPTAFRAEWEPPEARAPSATPRPLHLGFLCEYDALPGI
GHACGHNLIAEVGAAAALGVRGALEGLPRPPPPVKVVVLGTPAEEDGGGKIDLIEAGAFT
NLDVVFMAHPSQENAAYLPDMAEHDVTVKYYGKASHSASYPWEGLNALDAAVLAYNNLSV
FRQQMKPTWRVHGIIKNGGVKPNIIPSYSELIYYFRAPSMKELQVLTKKAEDCFRAAALA
SGCTVEIKGGAHDYYNVLPNKSLWKAYMENGRKLGIEFISEDTMLNGPSERQKKGPSERQ
KGSHASAVSQKRRKGVGGSVECWPRGPVKAVRQGEGRFAVTFMRDVTDTGEWVADSVEGS
TDFGNVSFVVPGIHPYFHIGSNALNHTEQYTEAAGSQEAQFYTLRTAKALAMTALDVIFK
PELLEGIREDFKLKLQEEQFVNAVE

>gi568815592f:88980895_89184193|GENSCAN_predicted_CDS_5|1518_bp
atgaggcccggaggggagcggcccgtggaagggggcgcgtgcaatggccgctccgagctg
gagctactgaagctgcgctcggcggagtgcatcgacgaggcggccgagcggctgggggcc
ctgagccgcgcgatctggagccagcccgagctggcctacgaggagcaccatgcccaccgc
gtgctgacgcacttcttcgagcgggagccgcccgcggcctcctgggcagtgcagccgcac
taccagctgcccacggccttccgcgccgagtgggagccgccggaggcccgggcaccgagc
gccacgccacgcccgctgcacctgggcttcctctgcgagtacgacgcgctgcccggcatc
ggccacgcctgcggccacaacctcatcgctgaggtcggggcggcggccgcgctgggcgtg
aggggggccttagagggcctccccaggccgcctccgcccgtgaaggtagttgtcctggga
acccctgcagaagaagatggtggtggcaaaattgatttaattgaagcaggggcttttaca
aatcttgatgttgtttttatggcccacccatcacaagagaatgctgcttatctaccagat
atggctgaacatgatgtgactgtgaaatactatggaaaagcatctcattctgcttcttat
ccctgggaaggattaaatgcattagatgctgctgtgctggcctataacaatctgtctgtg
ttcagacagcaaatgaaaccaacctggagagttcatggtataataaaaaatggtggtgta
aaacccaatatcattccctcttattctgaattaatctattacttccgtgcaccctcaatg
aaagaacttcaagttttgaccaaaaaggcagaagattgcttcagagctgcagctttggct
tcagggtgcacagtggaaattaaaggtggagcacatgattattacaatgttcttcccaat
aagagcctatggaaagcctatatggaaaatggaagaaagctaggaatagagttcatttca
gaagatacaatgttgaatggcccttcagagagacagaagaaggggccatcagagaggcag
aagggaagccatgcaagtgctgtgtcacagaagagaagaaagggagtaggtggcagtgtg
gagtgctggccaagagggccagtaaaagccgtgagacaaggtgagggcaggtttgcagtg
accttcatgagagatgtgactgatacaggggagtgggtggcagactcagtggaaggatct
acggattttggaaatgttagttttgtggttcctggaattcatccatattttcacattgga
tctaatgccttgaatcatactgaacagtacactgaagctgctgggtcacaggaagctcag
ttctacactctgcggacggccaaagctctggcaatgacggcactggatgttatttttaaa
ccagagttactggaaggaatcagagaggactttaaactgaaacttcaagaagaacagttt
gtaaatgcagtagaataa

>gi568815592f:88980895_89184193|GENSCAN_predicted_peptide_6|218_aa
XWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS
TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPC
TSGLPPPRTAMLDGNYSDGEVNDLDNYMPENGEKPDRMMVQLTLASERSSPQRKSQRSSY
HYIRCCRKYDTVATDVSCYPDPLEKHTTSVVGTFSSTR

>gi568815592f:88980895_89184193|GENSCAN_predicted_CDS_6|657_bp
ngctggtacaaccgtctctacattaatttcacgttgcgtcgccacatcttcttcttcttg
ctccaaacttatttccccgctaccctgatggtcatgctgtcctgggtgtccttctggatc
gaccgcagagccgtgcctgccagagtccccttaggtatcacaacggtgctgaccatgtcc
accatcatcacgggcgtgaatgcctccatgccgcgcgtctcctacatcaaggccgtggac
atctacctctgggtcagctttgtgttcgtgttcctctcggtgctggagtatgcggccgtc
aactacctgaccactgtgcaggagaggaaggaacagaagctgcgggagaagcttccctgc
accagcggattacctccgccccgcactgcgatgctggacggcaactacagtgatggggag
gtgaatgacctggacaactacatgccagagaatggagagaagcccgacaggatgatggtg
cagctgaccctggcctcagagaggagctccccacagaggaaaagtcagagaagcagctat
cattatattaggtgctgcaggaaatacgacactgtagcgactgatgttagttgttaccca
gatcccctggaaaagcacactaccagtgttgtgggcacatttagttccacccgttag