GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:50:14

Sequence gi568815592f:36944860_37145186 : 200327 bp : 49.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9902  10072  171  1  0  108  115   336 0.969  35.74
 1.02 Intr +  14286  14507  222  2  0  108   64   479 0.910  45.82
 1.03 Intr +  16592  16701  110  1  2   64   75   158 0.994  11.18
 1.04 Intr +  17027  17135  109  2  1   81   45    65 0.469   1.79
 1.05 Intr +  17269  17377  109  0  1   38   90    82 0.474   3.26
 1.06 Intr +  18076  18753  678  2  0   94  110   228 0.940  17.19
 1.07 Term +  18964  19085  122  2  2  107   49    34 0.945   0.04
 1.08 PlyA +  19952  19957    6                               1.05

 2.13 PlyA -  21504  21499    6                               1.05
 2.12 Term -  24115  24044   72  1  0  118   37    52 0.638   1.01
 2.11 Intr -  25255  25180   76  0  1  101   99    31 0.639   5.02
 2.10 Intr -  25614  25547   68  0  2   69   77    76 0.820   2.30
 2.09 Intr -  25835  25788   48  2  0  107   98    80 0.998   9.78
 2.08 Intr -  26197  26084  114  1  0   81   80    23 0.694   1.44
 2.07 Intr -  27937  27793  145  0  1  101   77   129 0.597  13.38
 2.06 Intr -  32391  32340   52  1  1   92   94    16 0.849   0.57
 2.05 Intr -  32832  32775   58  0  1   83  103    41 0.823   3.56
 2.04 Intr -  33296  33219   78  2  0  103   90   109 0.908  12.35
 2.03 Intr -  33752  33646  107  0  2  112  105   119 0.999  15.93
 2.02 Intr -  36813  36729   85  0  1   47  113    18 0.731  -0.41
 2.01 Init -  41260  40994  267  1  0   93   75   307 0.845  24.88
 2.00 Prom -  44101  44062   40                              -7.26

 3.00 Prom +  48454  48493   40                              -6.96
 3.01 Init +  60959  61026   68  1  2   85   80    69 0.747   6.34
 3.02 Intr +  63975  64206  232  0  1   92   51   186 0.831  13.08
 3.03 Intr +  66114  66195   82  2  1  119  -44   131 0.975   2.21
 3.04 Intr +  66821  66995  175  0  1   81   81   261 0.982  23.70
 3.05 Intr +  68750  68906  157  2  1   87   94   248 0.999  25.31
 3.06 Intr +  69103  69241  139  0  1   71   42   237 0.866  17.44
 3.07 Intr +  69787  69845   59  2  2   86  103    82 0.992   8.10
 3.08 Intr +  70033  70179  147  0  0   57   91   306 0.999  28.23
 3.09 Intr +  70909  71001   93  0  0  100  116   128 0.997  16.96
 3.10 Intr +  72348  72443   96  2  0   78   52    53 0.648   0.91
 3.11 Intr +  75682  75761   80  0  2   99   60   122 0.977   8.85
 3.12 Intr +  75850  75880   31  1  1   82   80     9 0.968  -2.37
 3.13 Intr +  76653  76745   93  2  0  112   84   146 0.999  16.76
 3.14 Intr +  77380  77511  132  0  0   74   73   145 0.985  12.44
 3.15 Intr +  79914  79934   21  2  0  117   81    30 0.802   2.94
 3.16 Intr +  80933  81188  256  1  1  126   -3   264 0.691  18.12
 3.17 Intr +  81232  81349  118  2  1  151   26    68 0.923   6.42
 3.18 Intr +  81403  81466   64  1  1   90   71    28 0.604   0.02
 3.19 Intr +  82570  82716  147  0  0  117  110   164 0.999  21.93
 3.20 Term +  83089  83304  216  0  0  118   52   305 0.997  27.04
 3.21 PlyA +  84114  84119    6                               1.05

 4.03 PlyA -  84794  84789    6                               1.05
 4.02 Term -  85509  85417   93  0  0   58   38   105 0.554   0.33
 4.01 Init -  88956  88846  111  0  0   75  100    97 0.702   9.81
 4.00 Prom -  91589  91550   40                              -4.76

 5.00 Prom +  99830  99869   40                              -7.66
 5.01 Sngl + 100001 100330  330  1  0   85   43   405 0.996  29.72
 5.02 PlyA + 100505 100510    6                               1.05

 6.00 Prom + 101058 101097   40                              -5.96
 6.01 Init + 106051 106113   63  0  0   54   87    63 0.023   3.95
 6.02 Term + 114664 114867  204  0  0   53   36   127 0.581   1.37
 6.03 PlyA + 115653 115658    6                               1.05

 7.00 Prom + 123940 123979   40                              -1.46
 7.01 Sngl + 132839 133366  528  1  0   83   36   235 0.672  12.06
 7.02 PlyA + 133680 133685    6                               1.05

 8.00 Prom + 146338 146377   40                              -5.76
 8.01 Sngl + 146453 146947  495  1  0   82   47   558 0.983  47.15
 8.02 PlyA + 146967 146972    6                               1.05

 9.04 PlyA - 149250 149245    6                               1.05
 9.03 Term - 172640 172538  103  1  1   83   47   101 0.049   3.25
 9.02 Intr - 192834 192803   32  0  2   89   96    41 0.286   1.93
 9.01 Intr - 199888 199779  110  2  2   87   51    52 0.225   1.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 186370 186608  239  2  2  127   41   112 0.898   6.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_1|506_aa
MHGSCSFLMLLLPLLLLLVATTGPVGALTDEEKRLMVELHNLYRAQVSPTASDMLHMRWD
EELAAFAKAYARQCVWGHNKERGRRGENLFAITDEGMDVPLAMEEWHHEREHYNLSAATC
SPGQMCGHYTQVVWAKTERIGCGSHFCEKLQGVEETNIELLVCNYEPPGNVKGKRPYQEG
TPCSQCPSGYHCKNSLCGESTGGWPPTRSHFGALSFQVAGFQPFKGRMLESLAASGGPAR
EPIGSPEDAQDLPYLVTEAPSFRATEASDSRKMGTPSSLATGIPAFLVTEVSGSLATKAL
PAVETQAPTSLATKDPPSMATEAPPCVTTEVPSILAAHSLPSLDEEPVTFPKSTHVPIPK
SADKVTDKTKVPSRSPENSLDPKMSLTGARELLPHAQEEAEAEAELPPSSEVLASVFPAQ
DKPGELQATLDHTGHTSSKSLPNFPNTSATANATGGRALALQSSLPGAEGPDKPSVVSGL
NSGPGHVWGPLLGLLLLPPLVLAGIF

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_1|1521_bp
atgcacggctcctgcagtttcctgatgcttctgctgccgctactgctactgctggtggcc
accacaggccccgttggagccctcacagatgaggagaaacgtttgatggtggagctgcac
aacctctaccgggcccaggtatccccgacggcctcagacatgctgcacatgagatgggac
gaggagctggccgccttcgccaaggcctacgcacggcagtgcgtgtggggccacaacaag
gagcgcgggcgccgcggcgagaatctgttcgccatcacagacgagggcatggacgtgccg
ctggccatggaggagtggcaccacgagcgtgagcactacaacctcagcgccgccacctgc
agcccaggccagatgtgcggccactacacgcaggtggtatgggccaagacagagaggatc
ggctgtggttcccacttctgtgagaagctccagggtgttgaggagaccaacatcgaatta
ctggtgtgcaactatgagcctccggggaacgtgaaggggaaacggccctaccaggagggg
actccgtgctcccaatgtccctctggctaccactgcaagaactccctctgtggtgagtcc
acgggtggatggccccccacgcgcagccactttggcgccctgtcgttccaagtggccgga
tttcaacccttcaaagggaggatgttagaaagtctggcggcttcgggggggcccgcgcga
gaacccatcggaagcccggaagatgctcaggatttgccttacctggtaactgaggcccca
tccttccgggcgactgaagcatcagactctaggaaaatgggtactccttcttccctagca
acggggattccggctttcttggtaacagaggtctcaggctccctggcaaccaaggctctg
cctgctgtggaaacccaggccccaacttccttagcaacgaaagacccgccctccatggca
acagaggctccaccttgcgtaacaactgaggtcccttccattttggcagctcacagcctg
ccctccttggatgaggagccagttaccttccccaaatcgacccatgttcctatcccaaaa
tcagcagacaaagtgacagacaaaacaaaagtgccctctaggagcccagagaactctctg
gaccccaagatgtccctgacaggggcaagggaactcctaccccatgcccaggaggaggct
gaggctgaggctgagttgcctccttccagtgaggtcttggcctcagtttttccagcccag
gacaagccaggtgagctgcaggccacactggaccacacggggcacacctcctccaagtcc
ctgcccaatttccccaatacctctgccaccgctaatgccacgggtgggcgtgccctggct
ctgcagtcgtccttgccaggtgcagagggccctgacaagcctagcgtcgtgtcagggctg
aactcgggccctggtcatgtgtggggccctctcctgggactactgctcctgcctcctctg
gtgttggctggaatcttctga

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_2|389_aa
MAGAGAGAGARGGAAAGVEARARDPPPAHRAHPRHPRPAAQPSARRMDGGSGGLGSGDNA
PTTEALFVALGAGVTALSHPLLYVKLLIQVGHEPMPPTLGTNVLGRKVLYLPSFFTYAKY
IVQVDGKIGLFRGLSPRLMSNALSTVTRGSMKKVFPPDEIEQVSNKDDMKTSLKKVVKET
SYEMMMQCVSRMLAHPLHVISMRCMVQFVGREAKYSGLIPHLLGDVVFLWGCNLLAHFIN
AYLVDDSVSDTPGGLGNDQNPGSQARIRLWVSGCMSVLALTACQALDVDQADTGSALEAH
SPFSQALAIRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNCGLQAGLPPYSPVFKSWIHCW
KYLSVQGQLFRGSSLLFRRVSSGSCFALE

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_2|1170_bp
atggcgggagccggagctggagccggagctcgcggcggagcggcggcgggggtcgaggct
cgagctcgcgatccaccgcccgcgcaccgcgcacatcctcgccaccctcggcctgcggct
cagccctcggcccgcaggatggatggcgggtcagggggcctggggtctggggacaacgcc
ccgaccactgaggctcttttcgtggcactgggcgcgggcgtgacggcgctcagccatccc
ctgctctacgtgaagctgctcatccaggtgggtcatgagccgatgccccccacccttggg
accaatgtgctggggaggaaggtcctctatctgccgagcttcttcacctacgccaagtac
atcgtgcaagtggatggtaagatagggctgttccgaggcctgagtccccggctgatgtcc
aacgccctctctactgtgactcggggtagcatgaagaaggttttccctccagatgagatt
gagcaggtttccaacaaggatgatatgaagacttccctgaagaaagttgtgaaggagacc
tcctacgagatgatgatgcagtgtgtgtcccgcatgttggcccaccccctgcatgtcatc
tcaatgcgctgcatggtccagtttgtgggacgggaggccaagtacagtggattaatccct
cacctcctgggcgatgtggttttcttgtggggctgtaacctgctggcccacttcatcaat
gcctacctggtggatgacagcgtgagtgacaccccaggggggctgggaaacgaccagaat
ccaggttcccaggccaggattcgtctttgggtttcagggtgcatgtctgtcttagcactg
actgcgtgccaagccctggatgttgatcaggcagacacgggctcagcccttgaggctcac
agtccgttcagccaggccctggccatccggagctataccaagttcgtgatggggattgca
gtgagcatgctgacctaccccttcctgctagttggcgacctcatggctgtgaacaactgc
gggctgcaagctgggctccccccttactccccagtgttcaaatcctggattcactgctgg
aagtacctgagtgtgcagggccagctcttccgaggctccagcctgcttttccgccgggtg
tcatcaggatcatgctttgccctggagtaa

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_3|801_aa
MKGASEEKLASVSNLVTVFENSRTPEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEA
VGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQEPEKKIVQELLETEQAYVAR
LHLLDQAMSDLSWRLQVFFQELLKTARSSKAFPEDVVRVIFSNISSIYQFHSQFFLPELQ
RRLDDWTANPRIGDVIQKLAPFLKMYSEYVKNFERAAELLATWTDKSPLFQEVLTRIQSS
EASGSLTLQHHMLEPVQRIPRYELLLKEYIQKLPAQAPDQADAQKALDMIFSAAQHSNAA
ITEMERLQDLWEVYQRLGLEDDIVDPSNTLLREGPVLKISFRRNDPMERYLFLFNNMLLY
CVPRVIQVGAQFQVRTRIDVAGMKMHRNFFNQSSAERHLDCFQLSAAANEAAVNSLVREL
MDAEFPHSFLVSGKQRTLELQARSQEEMISWMQAFQAAIDQIEKRNETFKAAAQGPEGDI
QEQELQSEELGLRAPQWVRDKMVTMCMRCQEPFNALTRRRHHCRACGYIFVPAEPVVCAR
CSDYRAELKYDDNRPNRVCLHCYAFLTGNVLPEAKEDKRRGILEVRATVPALTIRPLFRE
CVPGNHAGLTLSSAEEQASHDPRPLATAQAVWSLSPNGGTLWLQAVVHILLHFLYVPIRY
PRVPRAGVTASILQMGTLTLQKGSSATPDQSLMCSFLQLIGDKWGKSGPRGWCVIPRDDP
LVLYVYAAPQDMRAHTSIPLLGYQVTVGPQGDPRVFQLQQSGQLYTFKAETEELKGRWVK
AMERAASGWSPSWPNDGDLSD

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_3|2406_bp
atgaagggggcaagtgaggagaagctggcatctgtgtccaacctggtcactgtgtttgag
aatagcaggaccccagaagcagcacccagaggccagaggctagaggacgtgcatcaccgc
cctgagtgcaggcctcccgagtccccaggaccacgggagaagacgaatgtcggggaggcc
gtggggtctgagcccaggacagtcagcaggaggtacctgaactccctgaagaacaagctg
tccagcgaagcctggaggaaatcttgccagcctgtgaccctctcaggatcggggacgcag
gagccagagaagaagatcgtccaggagctgctggagacagagcaggcctatgtggcgcgc
ctccacctgctagaccaggccatgagtgacctgtcgtggcggctacaggtgtttttccag
gagctgctgaagacagcccgcagcagcaaggccttcccagaggatgtggtcagggtcatc
ttctccaacatctcctccatctatcagttccattctcagttcttcctcccagagctgcag
cggcgcctggacgactggacagctaacccccgcatcggtgacgtgatccagaagctggcc
cccttcctgaagatgtacagtgagtatgtcaagaactttgagcgagcggctgagctgctg
gccacctggaccgacaagtctccactcttccaggaggttctcactcgcatccagagcagc
gaggcttcgggcagcctgaccctgcagcaccacatgctggaaccagtgcagagaattcca
cgttacgagctgctgctcaaggagtacatccagaagctgccagcccaggccccagaccag
gccgatgcccagaaagccctggacatgatcttctcagctgcccagcactccaatgcagcc
atcactgagatggagcggctgcaggacctgtgggaggtgtaccagcgcctgggcctcgag
gacgacatagtagacccctctaacaccctgctccgtgagggcccggtcctcaagatctcc
ttccgccgcaacgaccccatggagcgctaccttttcttgttcaacaacatgctgctctac
tgtgtgcccagggtgatccaggtgggcgcccagttccaggtgaggacccgcatcgatgtg
gccgggatgaagatgcaccggaatttcttcaaccagtcttctgctgagagacacttagat
tgttttcagttgtcagcagctgcaaatgaggctgcagtgaatagcctggtgcgggagctg
atggatgctgagtttccccactccttcctggtgtccgggaagcagcgcaccctggagctg
caagcccggtcccaggaggaaatgatttcctggatgcaggccttccaagcagccattgac
caaatcgagaagcggaatgaaaccttcaaggctgcggcccaggggcctgagggagacatc
caggagcaggagctgcagtctgaggagctgggcctccgggcaccgcagtgggtccgggac
aagatggtgaccatgtgcatgcgctgccaggagcccttcaacgctctgacgcgccgtcgc
caccactgccgggcctgcggctatatcttcgtgcctgctgagccagtggtgtgtgccagg
tgctccgactaccgggccgaactgaaatacgacgacaacaggcccaaccgagtctgcctc
cactgctacgcattcctcactggaaatgtgctgcctgaggccaaggaggacaagaggcgg
ggcatcctggaggtgagggccactgtccccgcgctcaccatccgtcctctgttcagggaa
tgtgtgcccggcaaccatgctgggctgacactgtccagtgctgaggaacaagccagccat
gaccccaggcctctcgccacagcccaggcagtgtggagcctgtcaccaaatggaggcacc
ctttggctgcaggctgtcgtccacattcttctgcacttcctctatgtccccatccgatat
cccagggtgccaagagctggtgtcaccgcttccattttacagatgggaacactgacgctc
cagaaagggtcctcagccacgcctgaccagagcctgatgtgcagcttcctgcagctcatc
ggggacaagtggggcaagagcggcccccggggctggtgtgtgatccctcgggatgacccc
ctcgtgctctatgtctatgctgcccctcaggacatgagggctcacacctccatccccctg
ctgggctaccaggtgactgttgggccccagggggaccctcgggtcttccagctacagcag
tcaggccagctctacaccttcaaggccgagacggaggagctgaagggccgctgggtgaag
gccatggagcgggcggccagtggctggagccccagctggcccaacgatggggacctgtcc
gactga

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_4|67_aa
MPIFMFANFHGGNTLIVAIFKKKQVLVSSHEGGTGSKIKPLEKLRYQCCRIDSAVTEPAA
FSIIGEF

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_4|204_bp
atgccaattttcatgtttgccaatttccatggtggaaatactctcattgtggccatcttc
aaaaagaagcaggtcctggtatcaagccatgagggcgggacaggcagtaagattaaaccc
ctggaaaagcttaggtatcagtgctgcagaatcgactctgctgtcaccgagccagctgcc
ttcagcatcattggcgagttttaa

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_5|109_aa
MAAVGVFSVSRLLGRSRPQLGRPMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLK
SHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFHNPHVNPLPTGYEDE

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_5|330_bp
atggcggcagttggtgtgttctcggtttctcggctgctgggtcggtcccgcccacagctg
gggcggcctatgtcgagtggcgcccatggagaagagggctcagctcgcatgtggaagacc
ctcaccttcttcgtcgcgctccccggggtggcagtcagcatgctgaatgtgtacctgaag
tcgcaccacggagagcacgagagacccgagttcatcgcctacccccatctccgcatcagg
accaagccgtttccctggggagatggtaaccatactctattccataaccctcatgtgaat
ccacttccaactggctacgaagatgaataa

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_6|88_aa
MPLLIPDISKGSCCGKGDSAQESNNTRGSRAILKQKCDYNAFCTGYKPSPAPESRVTLTS
VLFLASWVVFLPTDLANPRRLALFSLLT

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_6|267_bp
atgcctctcctcatccctgatatatccaagggcagctgctgtggcaagggggacagtgca
caggagagcaacaacacccggggatcaagggccatcctcaaacaaaagtgtgattataac
gcgttctgcacgggctataaaccgtccccagctccggagagcagggtgaccctcaccagc
gtcttatttctggcctcctgggttgtgttcctgcctactgacttggcaaatcctaggcga
ctcgccttgttttctctcctcacttaa

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_7|175_aa
MVLRLLPVPALPKSKSTVLGVLSTCLSARPAPFSLKGLCQPGHDSAASRGARASPASKQH
TVCGQPPTTFPLPDVSEEPWLPWSPHGQPCPDMPLPLCCPALHSVSRRPDVPALVLAALN
EVQMCSLARASSGCYQRRGRPCEGAARLQLAAAVLEEECSGKDSHWNVGSRDVSA

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_7|528_bp
atggtcctgagactgctcccagttccagccctccccaagagcaagagcactgtgcttgga
gtcctgagtacctgtctctctgccagacctgcccccttcagcctaaaaggcctctgccag
ccagggcacgactctgctgcatccagaggggccagagccagccccgccagcaagcagcac
accgtctgcggccagccgcccaccaccttcccacttccagatgtctcagaggagccctgg
ctgccttggagcccgcatgggcagccctgtcctgacatgcccctgcccctttgctgccct
gccttgcactctgtctcgcggcggccagatgtgccggctttggtgctggcggctcttaat
gaggtccagatgtgcagcttggcccgggccagcagcggctgctaccaaaggagagggagg
ccctgtgagggagcagccaggctgcagctggccgcggcggtgctggaggaggaatgctct
gggaaggattcccactggaatgtgggctctcgggatgtctctgcctaa

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_8|164_aa
MWPKFNPSEIKVVYLRCTGGEVSATSALGPKIGPLDLSPKKVGDDIAKATGDWKGLRITV
KLTIENRQAQIEVVPSASALIIKALKEPRDRKKQKNIKHSGNITFDEIVNIAPRMRHRSL
ARDLTGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_8|495_bp
atgtggccgaagttcaaccccagcgagatcaaagtcgtatacctgaggtgcactgggggt
gaagtcagtgccacgtctgcgctgggccccaagatcggccccctggacctgtctccaaaa
aaggttggtgatgacattgccaaggcaacgggtgactggaagggcctgaggattacagtg
aaactgaccattgagaacagacaggcccagattgaggtggtgccttctgcttctgccctg
atcatcaaagcccttaaggaaccaagagacagaaagaaacagaaaaacattaaacacagt
gggaatatcacttttgatgagatcgtcaacattgctccacggatgcggcaccgatcttta
gccagagatctcactggaaccattaaagagatcctggggactgcccagtctgtgggctgc
aatgttgatggccgccaccctcatgacatcatagatgacatcaacagtggtgctgtggaa
tgcccagctagttaa

>gi568815592f:36944860_37145186|GENSCAN_predicted_peptide_9|81_aa
XKVRIPAGALDQQHLSTEVAVFDALLSSRDKINNLPNGEPCEDEVGLRYSTILTMLILAA
IILTQVFILTCELLHGSHSGY

>gi568815592f:36944860_37145186|GENSCAN_predicted_CDS_9|246_bp
ntaaaagtacgaattccagctggagctcttgaccaacaacatctttctacagaagttgct
gtcttcgatgctttgctgagttccagagataagataaataatttaccaaatggggagccc
tgtgaagatgaagttggtttaagatattctacgattttgaccatgctcattctcgctgcc
atcatcctcacccaagttttcatcctcacatgtgaattattgcatggcagtcactcaggt
tattaa