GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:48:31

Sequence gi568815592f:146443872_146654602 : 210731 bp : 37.13% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    359    354    6                               1.05
 1.01 Sngl -   5377   4574  804  1  0   53   49   373 0.947  25.46
 1.00 Prom -   5562   5523   40                              -7.45

 2.00 Prom +   7336   7375   40                              -4.65
 2.01 Init +   9776   9893  118  1  1   72  109   102 0.162  11.11
 2.02 Term +  28288  28397  110  2  2   84   44   125 0.655   5.39
 2.03 PlyA +  28535  28540    6                               1.05

 3.00 Prom +  45462  45501   40                              -5.15
 3.01 Sngl +  57450  58352  903  2  0   86   48   173 0.852   9.07
 3.02 PlyA +  58543  58548    6                               1.05

 4.00 Prom +  62005  62044   40                              -4.25
 4.01 Init +  63082  63142   61  0  1   52   92    27 0.617   0.96
 4.02 Intr +  63193  63312  120  2  0   22  105   120 0.438   6.65
 4.03 Term +  65730  65845  116  1  2   47   54    64 0.085  -3.35
 4.04 PlyA +  66059  66064    6                               1.05

 5.06 PlyA -  66846  66841    6                               1.05
 5.05 Term -  67822  67612  211  0  1   53   47   144 0.503   2.58
 5.04 Intr -  69361  68978  384  0  0   57   39   151 0.314   0.14
 5.03 Intr -  70849  70692  158  1  2   63   72   128 0.106   6.59
 5.02 Intr -  77947  77499  449  2  2   65   86   245 0.060  14.14
 5.01 Init -  81961  81955    7  1  1   85  110     0 0.443   3.02
 5.00 Prom -  88977  88938   40                              -5.45

 6.00 Prom +  95563  95602   40                              -2.65
 6.01 Init + 100001 100250  250  1  1   79  102   480 0.923  44.17
 6.02 Intr + 105593 105870  278  0  2   70  100   220 0.257  17.71
 6.03 Term + 110585 110734  150  1  0   96   40   180 0.996  10.93
 6.04 PlyA + 111065 111070    6                               1.05

 7.04 PlyA - 112008 112003    6                               1.05
 7.03 Term - 114113 113730  384  2  0   10   43   199 0.340   1.50
 7.02 Intr - 121899 121818   82  2  1   92   87    23 0.392   1.32
 7.01 Init - 122774 122737   38  2  2   86   91    28 0.486   2.46
 7.00 Prom - 124108 124069   40                              -0.85

 8.00 Prom + 133397 133436   40                              -3.35
 8.01 Init + 143803 143946  144  0  0  104   -4   127 0.008   3.45
 8.02 Term + 155020 155247  228  0  0   89   49   228 0.019  14.65
 8.03 PlyA + 156735 156740    6                               1.05

 9.00 Prom + 158527 158566   40                              -6.45
 9.01 Init + 158756 158861  106  1  1   99   78   125 0.868  13.07
 9.02 Intr + 177507 177639  133  1  1   53   30   135 0.070   2.98
 9.03 Intr + 191504 191666  163  2  1  103   78   174 0.938  16.96
 9.04 Term + 207190 207321  132  0  0   63   49   112 0.041   1.91
 9.05 PlyA + 208075 208080    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_1|267_aa
MWESLELPRDLLNGFDQKPDSDMDSKVQVEVVSDGDEELVGKWSKGDSCYILAKRLSAFC
SCSRNLWNFELERDDSGYLMEEISKHQSIQEVTWVLLRVFSFIREEEDKSLENVQPDNVI
EKKNPFCKEKFKLVAEICISNESNVNPPDNEENVSRTRQRSSRSPCHHRPGGIGENGFMV
WDQGLRAVCSLGTWCPVFQLPQPQLKGANIKLRQWLQRVQAPSLGSFHVVLSLQVHRSQE
LGFGNLCLDFKRAEVCCRGRVLMGNLC

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_1|804_bp
atgtgggaaagtttagaacttcctagagacttgttgaatgggtttgaccaaaagcctgat
agcgatatggacagtaaggtccaggttgaggtggtctcagatggagatgaggaacttgtt
gggaagtggagcaaaggtgactcttgttatattttagcgaagagactgtcagcattttgc
tcctgctctagaaatttgtggaactttgaacttgagagagatgattcagggtatctgatg
gaagaaatttctaagcaccaaagcattcaagaggtgacttgggtgctgttaagggtattc
agttttataagggaagaagaggataaaagtttggaaaatgtgcagcctgacaatgtgata
gagaagaaaaacccattttgtaaggagaaattcaagctggttgcagaaatttgcataagt
aatgagtcaaatgttaatcccccagacaatgaggaaaatgtctccaggacacgtcagagg
tcatcacgcagcccctgccatcacaggcctggaggcataggggaaaatggtttcatggtc
tgggaccagggtctccgtgctgtgtgcagcctagggacttggtgccctgtgttccagctg
ccccagccacagctgaaaggggccaacataaagctcaggcagtggcttcagagggtgcaa
gccccaagccttggcagcttccatgtggtgttgagcctgcaagtgcacagaagtcaagaa
ttggggtttgggaacctgtgcctagatttcaaaagagcagaagtttgctgcaggggcagg
gtgctcatggggaacctctgctag

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_2|75_aa
MVYGASEAIRQRHSSASKPRRSQSESLGPEFQGLWEWLPARKSNTLTIDDGLYKSDPRKE
TETTPTVKVFDCQLG

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_2|228_bp
atggtctacggggcttctgaggcgatcaggcagcgtcattcttcagccagtaagccaaga
aggagtcaatcagagagccttgggccagagttccaggggctctgggagtggctgccagct
agaaaatccaacactctaactatagatgatggtttgtacaagtcggaccccaggaaagag
acagaaaccacaccaactgtgaaggtatttgactgtcaacttggctag

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_3|300_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKARGITLPD
FKLYYKATVTKTARYWYQNRDIHQWNRTEPSEITPHIYNYLIFDKPDKNKKWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTLEENLGITIQDIGMSKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIY
NELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKRQNEKMLIITGHQRNAKDIVNFKIC

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_3|903_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcgccaagtcaatcctaagccaaaagaacaaagccagaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcacggtactggtaccaaaacaga
gatatacatcaatggaacagaacagagccctcagaaataacaccgcatatctacaactat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaatacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgagcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaag
gatatgaacagacacttctcaaaagaagatatttatgcagccaaaagacaaaatgaaaaa
atgctcatcatcactggccatcagagaaatgcaaaagatattgtaaattttaaaatctgt
taa

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_4|98_aa
MSKVLFSQSIKSEFPSSSESIAFQQYNYKYKQVREALCEELSFGDMAIFHATQDDLLMDS
GISPNAIPLPAPTPQQAPACDVPCPVSMCSRCSIPTYE

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_4|297_bp
atgagtaaggtactcttctcgcaaagcattaaatcagaatttccaagctcatcagagagc
atcgcatttcaacagtacaattataagtacaaacaggttcgggaagcactatgtgaagag
ttaagctttggggacatggccattttccatgcaacccaagatgacctcctcatggattct
ggtatttctcctaatgctatccctctgccagcccccactccccaacaggccccagcgtgt
gatgttccctgccctgtgtccatgtgttctcgttgttcaattcccacctatgagtga

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_5|402_aa
MTVLEVLARAIRQKKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTGSQIMSELPFPIASKRIKYLGIQLTRDVKNLFKENHKPL
LNEIKEDTNKWKNIPCSWIRRINIMKMDILPKDCSSLPAMEQNWTENDFDQLTEVGFRRS
VITNFSELKEHVLTQWKEAKNLEKRSRRQKIYKYIQDLNSALHQADLIDIYRTLPPKSTE
YTFFSAPHRTYSKIDHIIGSKTLLSKCKRTEITTNCLSDHSAIKLELKFKKLTQNCTTTW
KLNNLLLNDYWVNNKMKAEIKMFFETNENKDTTIVLEVLARAIRQEKEIKGIQLGKQEVK
LSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKS

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_5|1209_bp
atgacagtgttggaagttctcgccagggcaatcaggcagaagaaagaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtgtatttg
gaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaa
acagggagccaaatcatgagtgaactcccattcccaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaagaacctcttcaaggagaaccacaaaccactg
ctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatggataaga
agaatcaatatcatgaaaatggacatactgcccaaggattgcagctccttgccagcaatg
gaacaaaactggacggagaatgactttgatcagttgacggaagtaggcttcagaaggtcg
gtaataacaaacttctctgagctaaaggagcatgttctaacccagtggaaggaagctaaa
aaccttgaaaaaagatcaagaagacaaaagatttacaagtatatccaggatttgaactca
gctctgcaccaagcagacctaatagacatctacagaactctcccccctaaatcaacagaa
tatacattcttctcagcaccacatcgtacttattctaaaattgaccatataattggaagt
aaaacactcctcagcaaatgtaaaagaacggaaatcacaacaaactgtctctcagaccac
agtgcaatcaaattagaactcaagtttaagaaactcactcaaaactgcacaactacatgg
aaactgaacaatctgctcctgaatgactactgggtaaataacaaaatgaaggcagaaata
aagatgttctttgaaaccaatgagaacaaagacacaaccatagtgttggaagttctggcc
agggcaatcaggcaagaaaaagaaataaagggtattcaactaggaaaacaggaggtcaaa
ttgtccctgtttgcagatgacatgattgtgtatttggaaaaccccatcgtctcagcccaa
aatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcataa

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_6|225_aa
MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_6|678_bp
atggcgggcggaggagccggggaccccggcctgggggcggccgccgccccagcgcccgag
acccgcgagcacctcttcaaggtgctggtgatcggcgagcttggcgtgggcaagaccagc
atcatcaagcgctacgtccaccagctcttctcccagcactaccgggccaccatcggggtg
gacttcgccctcaaggtcctcaactgggacagcaggactctggtgcgcctgcagctgtgg
gacatcgcggggcaggagcgatttggcaacatgacccgagtatactacaaggaagctgtt
ggtgcttttgtagtctttgatatatcaagaagttccacatttgaggcagtcttaaaatgg
aaaagtgatctggatagtaaagttcatcttccaaatggcagccctatccctgctgtcctc
ttggctaacaaatgtgaccagaacaaggacagtagccagagtccttcccaggtggaccaa
ttctgcaaagaacatggctttgccggatggtttgaaacctctgcaaaggataacataaac
atagaggaagctgcccggttcctagtggagaagattcttgtaaaccaccaaagctttcct
aatgaagaaaacgatgtggacaaaattaagctagatcaagagaccttgagagcagagaac
aaatcccagtgttgctga

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_7|167_aa
MVKGKTHVLHGSRTPQRVLASKKTQTRCSPLTLDFPDSRILEVLARAIKQEKEIKGIQLG
KEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTES
QIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNK

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_7|504_bp
atggtgaaaggcaaaacgcacgtgttacatggcagcaggaccccacagagagtcctcgct
agcaagaagacccaaaccagatgcagccccttgaccctggacttcccagactccagaatt
ttggaagttctggccagggcaattaagcaggagaaggaaataaagggtattcaattagga
aaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaacccc
atagtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatac
aaaatcaatgtacaaaaatcacaagcgttcttatacaccaataacagacaaacagagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacttaggaatc
caacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaa
ataaaagaggatacaaacaaatag

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_8|123_aa
MANHLMIELGLLLVMLMSGTCSKQELAVTEWTHFHLSDTLPDTDKHSRPQAAEPAPRAPP
PLSGRWTRDAVSWQRRRGAERARRLFAQSSALHRSASAMASKQTKKKEVHRINSAHGSDK
SKE

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_8|372_bp
atggccaaccatctgatgatagaactgggactgctgttggtcatgttgatgagtgggaca
tgtagcaaacaagaacttgctgtaactgaatggacacattttcacctgtctgacacccta
cctgacactgacaaacattcaagaccacaggccgcagagcccgcccccagggccccgccc
ccgctctccgggcgctggacgcgggacgccgtctcctggcaacgcagacgcggagccgag
cgcgcccgcaggctctttgctcagagctcagccctacatagatcggcttctgccatggcc
tccaaacaaaccaaaaagaaagaggtgcatcgtatcaactcggcgcacggatcggataaa
tcgaaagagtaa

>gi568815592f:146443872_146654602|GENSCAN_predicted_peptide_9|177_aa
MVRFGEGCLRQGSPPAGAADQYQSMACKDLGCAAGGSSAFLVHPIAPLERSQGGLPMKIP
KGEEIDRPPLISSNHHGNHSFYPFGSNVQSGSTEQKKGKFPLWPEWSEADINSEKWDAGK
GAKEKDKTGKSPVFMLLSSHRQRMIARDDAMNVREGKFPETKAVLVAAGPRYGDNQP

>gi568815592f:146443872_146654602|GENSCAN_predicted_CDS_9|534_bp
atggtcaggttcggggaaggctgtctacgtcaagggtccccacccgctggggctgcggac
cagtaccagtccatggcctgtaaggacctgggctgtgcagcaggaggtagttcagctttc
ctggtacacccaattgctcccctggaaaggagtcagggtgggcttcccatgaagattcca
aaaggtgaggagattgaccgtccacctctcatttcctccaatcaccatggaaaccacagt
ttctatccttttggcagtaatgtacaatctggttctactgaacaaaagaaggggaaattc
ccactctggccagagtggagtgaagctgacataaattcagaaaagtgggatgcaggcaaa
ggtgcaaaagaaaaggacaaaacaggaaaaagccctgtatttatgttgctttcctcacac
agacagagaatgatagcaagagatgatgccatgaacgtgagggaagggaaattccctgag
acaaaggcagtcttggtagctgctggtcccaggtatggggacaaccagccatga