GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:19:38

Sequence gi568815592f:133789398_133991799 : 202402 bp : 38.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    761    756    6                               1.05
 1.04 Term -   1339   1001  339  1  0   45   54   276 0.416  13.45
 1.03 Intr -  13671  13582   90  0  0   63   73    83 0.266   3.57
 1.02 Intr -  25258  25205   54  1  0   73   90    86 0.723   5.56
 1.01 Init -  30946  30872   75  1  0   78   66    46 0.463   2.54
 1.00 Prom -  32354  32315   40                              -4.15

 2.04 PlyA -  35128  35123    6                               1.05
 2.03 Term -  36182  35954  229  1  1   41   36   178 0.515   3.02
 2.02 Intr -  49830  49718  113  0  2   52   81   114 0.261   5.36
 2.01 Init -  53224  53141   84  1  0   47   77    73 0.243   2.97
 2.00 Prom -  58523  58484   40                              -5.35

 3.05 PlyA -  59354  59349    6                               1.05
 3.04 Term -  65182  64985  198  1  0   86   42   115 0.980   3.12
 3.03 Intr -  65472  65290  183  0  0   72   65    96 0.948   4.76
 3.02 Intr -  65887  65674  214  0  1    7   75   210 0.920   9.40
 3.01 Init -  71108  70984  125  2  2   66   68    69 0.743   2.39
 3.00 Prom -  72350  72311   40                              -4.95

 4.00 Prom +  81091  81130   40                              -3.65
 4.01 Init + 100001 100450  450  1  0   80  105   658 0.936  62.66
 4.02 Intr + 102250 102366  117  0  0  118    5   110 0.644   5.44
 4.03 Term + 103578 103700  123  2  0   60   47   170 0.752   7.50
 4.04 PlyA + 106121 106126    6                               1.05

 5.03 PlyA - 106135 106130    6                              -3.64
 5.02 Term - 106960 106259  702  1  0   -7   44   330 0.572  11.63
 5.01 Init - 131649 131584   66  0  0   72   64    81 0.118   3.66
 5.00 Prom - 138923 138884   40                              -7.75

 6.00 Prom + 140559 140598   40                              -5.35
 6.01 Init + 142329 142474  146  2  2   68   98   139 0.468  12.54
 6.02 Term + 142837 143356  520  1  1    7   43   225 0.518   2.68
 6.03 PlyA + 143688 143693    6                              -0.45

 7.00 Prom + 143754 143793   40                              -8.25
 7.01 Sngl + 144693 145643  951  2  0   68   38   395 0.990  28.83
 7.02 PlyA + 145701 145706    6                               1.05

 8.00 Prom + 146983 147022   40                              -3.25
 8.01 Init + 147678 147778  101  2  2   76  103    37 0.631   2.25
 8.02 Intr + 157569 157697  129  0  0   84  110    30 0.738   3.69
 8.03 Intr + 160811 160901   91  2  1  119   37    52 0.397   2.28
 8.04 Intr + 162663 163063  401  2  2   54   32   176 0.050   0.98
 8.05 Intr + 163955 164089  135  2  0   90   49    82 0.077   3.26
 8.06 Intr + 164732 164850  119  2  2   -3   92   116 0.103   2.09
 8.07 Intr + 190685 190863  179  0  2  118   83    63 0.921   7.52
 8.08 Intr + 193171 193253   83  0  2   95   94    -2 0.892  -1.38
 8.09 Intr + 193420 193483   64  1  1   72   97    94 0.942   6.50
 8.10 Intr + 194979 195082  104  2  2   83  111    35 0.958   3.35
 8.11 Intr + 195180 195274   95  0  2   34   66   103 0.561   1.39
 8.12 Term + 197564 197643   80  0  2   98   31    72 0.491  -0.55
 8.13 PlyA + 198075 198080    6                               1.05

 9.02 PlyA - 198119 198114    6                               1.05
 9.01 Term - 200833 200644  190  0  1   59   34   155 0.396   3.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_1|185_aa
MVIEETKTGLYIPDIFDEEVVCSGQVHGIYVTSAEAAAEEGRQLKWFVPKREAITDAGEK
VEKKEPSYTVDKNSRDLVSCMPATPDVAKRGQGTAQAIASEGASPKPWQLPHGIEPVGAQ
KSGIEVWEPPRRFQGMYGSAWMSRKKFAAGVELSWKTSVRAVQMANVGLKPPHRVPTGAL
SLVEL

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_1|558_bp
atggtgatagaagagacaaagactggattatatatacctgatatattcgatgaagaagta
gtgtgttcaggacaggtacatggcatttatgtgacatcagcagaggcagctgctgaagaa
ggtagacagctaaaatggtttgtgccaaaaagagaggcaataacagatgctggtgagaaa
gtggagaaaaaagaaccctcatacacagttgataaaaattctagagacttggtgtcctgt
atgccagccactccagatgtggctaaaaggggccaaggtacagctcaggccatagcttca
gagggtgcaagccctaagccttggcagcttccacatggcattgagcctgtgggtgcacag
aagtcaggaattgaggtttgggaacctccacgcagatttcaggggatgtatggaagtgcc
tggatgtccaggaagaagtttgctgcaggagtggagctctcatggaaaacttctgttagg
gcagtacagatggcaaatgtgggattgaagcccccacacagagtccccactggggcactg
tctttagtggagctgtga

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_2|141_aa
MDSQKRESSRGDGSGPLGFPETNLRQQELRFLSPFLADLKQSKKGADQSYLGDKSGLGEI
AARRARFYRNVHPYVHCSSIHNRKDMESTQVAINGGLNKENVVHIHHGILCSHKELNHIL
CGNTDAAGNHYPKQTNTETEN

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_2|426_bp
atggatagtcagaaaagagaaagcagcagaggagatggctctggtccactgggctttcct
gagaccaatctgagacagcaggagctacgctttctctccccgttccttgccgatcttaaa
caatccaagaaaggggcagaccaaagctacttaggagacaagagcggtcttggtgagatt
gcagcaagaagggcaaggttctaccgaaacgtgcacccatatgttcattgcagcagtatt
cacaatagaaaagacatggaatcaacccaggtggccatcaatggcggactgaataaagaa
aatgtggtacatatacaccatggaatactatgcagccataaagaattaaatcatatcctt
tgtggcaacacagatgcagctggaaaccattatcctaagcaaactaacacagaaacagaa
aactaa

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_3|239_aa
MGKDFMTKTPKATATKAKIDKWDLIKLKSFCTAKETINRINRISDLVTVPEAGEKVPPES
ERKSPLEAWRQQYEPLKPGEGTLAGWGRQRCSLTSAGEDALPLGMRAPWGQEQTSGGDSP
RLLRDRQLPWLASEPQPPLWVSWGHWERSQPIPCTLALSADWSCPLGFPGLKARKFELSS
PFHLNPFGQSIRMLPISSGIFKALIRRLTAPSYALPSFPSGIPLDACSKYLLAPEEIHM

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_3|720_bp
atgggcaaggattttatgacaaagacaccaaaagcaactgcaacaaaagcaaaaattgac
aaatgggatctaattaaacttaaaagcttctgcacagcaaaagaaactatcaacagaata
aacaggatctcagatttggtgaccgtcccagaagctggggagaaggtgccgccagagagt
gagcggaaatctcccttggaggcctggaggcagcaatacgaacccctcaagccgggagag
ggcaccctggctggctggggccggcagcgctgcagcctcacgtccgcaggtgaagatgcg
ctcccgctgggcatgcgcgccccctggggccaggagcagacctccgggggagactcgccg
cggcttctgcgagatcgtcagctcccctggctggcctcagagcctcagcctcccctctgg
gtttcgtggggtcactgggagcggtcgcagcccatcccctgcacgctggcactatctgct
gactggagttgccctctggggttcccagggctaaaagcgaggaaattcgaattatcttcc
ccattccacttaaaccccttcggccaatcaatccggatgttaccgatttcctctgggata
tttaaagctttgatccgcaggcttacagctccatcttacgcactcccatctttcccctct
gggatccctctagatgcctgctcaaaatacctgctggcgccagaggaaattcacatgtaa

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_4|229_aa
MSTGSLSDVEDLQEVEMLECDGLKMDSNKEFVTSNESTEESSNCENGSPQKGRGGLGKRR
KAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDT
LRLASSYIAHLRQILANDKYENGYIHPVNLAPSPPHPLRHGHLPPPPSSFPQTWPFMVAG
KPESDLKEVRSPRRPMRQMPPGLFNVRGYDRSVYKTSSVIYTVIPRREP

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_4|690_bp
atgtccaccggctccctcagcgatgtggaggaccttcaagaggtggagatgttggaatgt
gacgggttgaaaatggattcgaacaaggaatttgtgacttccaacgagagcaccgaggag
agctccaactgcgagaatgggtctccccagaagggccgcggcggcctgggcaagaggagg
aaggcgcccaccaagaagagccccctgagcggggtcagccaggaggggaagcaggtccag
cgcaacgccgccaacgcgcgagagcgggcccgcatgcgagtgctgagcaaggccttctcc
agactcaagaccaccctgccctgggtgccccccgacaccaagctctccaagctggacacg
ctcaggctggcgtccagctacatcgcccacttgaggcagatcctggctaacgacaaatac
gagaacgggtacattcacccggtcaacctggccccgagtccaccccaccccctccgccac
ggccacttacctcctccaccctcttctttcccgcagacgtggccctttatggtggccggg
aaacccgagagtgacctgaaagaagtgcgcagcccgcggcggccgatgcgccagatgcca
ccggggctgtttaatgttcggggttatgaccgcagtgtttacaagacgtcttcggttatt
tatactgttattcctcgcagagagccttga

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_5|255_aa
MSHRLTHCAPPSRLLQTMLLQQSLEVVNLSVNWKEGGPAQPAQTQRSKACSSKRLKEARR
TLKNAAGNQRVSKGRASIWSEGCKAKKGCWQASCAPLAPGFPAVWGRNPEPALRLIPEPA
DLQRDTHPLARRLHPERDGKEAVRTEAQNSFPVSPTSKNSSPRRGSLRGCFPPPPLRSAP
RWPRALQALLLRSPPAVASLQPQLQADFPTHTVPDQSKANHSHWSDGEIFFWPENGPRDS
LAGDVIPGSPDFSLP

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_5|768_bp
atgagccaccgcctcacccactgtgctcctcctagcaggctcctgcagaccatgctcctg
cagcagtccttggaggtggttaatctttcggtgaactggaaggagggtgggcccgcgcag
cctgcccagacccaaagatcaaaggcgtgttcctccaaacgcctgaaggaagcccggcgg
actctgaagaatgctgctggcaaccagcgagtttccaagggcagagccagcatttggagc
gaaggatgcaaagctaagaaaggatgttggcaggccagctgcgccccgctcgcacctggg
ttccccgcggtgtggggacgtaacccagaacctgccctgcgcctcatccctgagccagcg
gatctgcagcgggacacgcacccgctggcccggagattgcacccggaaagggacggaaag
gaggctgtgcggactgaggctcagaactccttccccgtctcgcctacttccaaaaactct
tctcccaggcggggaagcctcagaggctgcttccctcctccgcctttgcgctcagctccc
cgctggccgcgagctctccaggcactcctgctgcgctcgccaccagccgtggcgtccctg
caaccccaactccaggccgacttcccgacgcacacagtgccggaccagagcaaggccaac
cactcgcactggagtgatggggagatttttttctggcccgagaatggaccaagggactct
cttgcaggggacgtgattccagggagcccagatttctctctcccttag

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_6|221_aa
MRRNQCKKAENSKNQKASSPPKEHNSWRAREQNWTENEFDKLTEVGFRSDEEHGTKLENT
LQAIIQENFPNLAGQTNIQIQEIQRTPQRYSLRRAIPRHIIIRFTKVEMKEKMLRAAREK
GRVTHKGKPIRLTADLAGEALQARREWEPKFNILKENNFQSRISYPGKLSFISEGEIKSF
TDKQMLRDFVTTRPALQELLKEALNMERNNRYQPLQKLTKL

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_6|666_bp
atgaggagaaaccagtgcaaaaaggctgaaaattccaaaaaccagaaagcctcttctcct
ccaaaggaacacaactcctggagagcaagggaacaaaactggacagagaatgagtttgac
aaattgacggaagtaggcttcagaagtgatgaggagcatggaaccaagttggaaaacaca
cttcaggctattatccaagagaacttccccaacctagcaggacagaccaacattcaaatt
caggaaatacagagaacaccacaaagatactccttgagaagagcaatcccaagacacata
atcatcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaa
ggtagggttacccacaaagggaagcccatcagactaacagctgatctcgctggagaagct
ctacaagccagaagagagtgggagccaaaattcaacattcttaaagaaaataattttcaa
tccagaatttcatatccaggcaaactaagcttcataagtgaaggagaaataaaatccttc
acagacaagcaaatgctgagagactttgtcaccaccaggcctgccttacaagagctcctg
aaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaaacttaccaaa
ttgtaa

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_7|316_aa
MGKSLDTYILPRLNQEEAESLNRPITSSEIEAVINSLPTKKSPSPDRVTAEFYQRYKEVL
VPFRLKLYQTIEKEELLPNSFYEAGIILIPKPGRNTTRKENFRPIFLMNIDVKIFNKILE
NRIQQHIKKLINHDQVSFIPRMQGWFNICKSINVIHINRTNDKNHMIISIDAEKAFNKIQ
HPFMIKTLNKLGTDGTYLKIIRAIYDKLAANIILNGQNLEAFPLKTSTRQGCHLSPLLFK
IILEVLARAIRKEKEIKGIQIGGEEVKLSLFAEDMIVYLEIPIISTPNLLNLISNFSKVS
GYKNQCTQITSVPIHQ

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_7|951_bp
atgggtaaatccctggacacatatatcctcccaagactaaatcaggaagaagctgaatcc
ctgaatagaccaataacaagttctgaaattgaggcagtaattaatagcctaccaaccaaa
aaaagcccaagtccagacagagtcacagctgaattctaccagaggtacaaggaggtgctg
gtaccattccgtctgaaactataccaaacaatagaaaaagaggaactcctccctaactca
ttttatgaggccggcatcatcctgataccaaaacctggcagaaacacaacaagaaaagaa
aatttcaggccaatattcctgatgaacatcgatgtgaaaatcttcaataaaatactggaa
aaccgaatccagcagcacatcaaaaagcttatcaaccacgatcaagtcagcttcatccct
cggatgcaaggctggttcaacatatgcaaatcaataaatgtaattcacataaacagaacc
aatgacaaaaaccacatgattatctcaatagatgcagaaaaggccttcaataaaattcaa
caccccttcatgataaaaactctcaataaactaggtactgatggaacatatctcaaaata
ataagagctatttatgacaaactggcggccaatatcatactaaatgggcaaaacctggaa
gcattccctttgaaaaccagcacaagacaaggatgccatctctcaccactcctattcaaa
ataatattggaagttctggccagggcaatcaggaaagaaaaagaaataaagggtattcaa
ataggaggagaggaagtcaaattgtctctgtttgcagaggacatgattgtctatttagaa
atccccatcatctcaaccccaaatctccttaacctgataagcaacttcagcaaagtctca
ggatacaaaaatcaatgcacacaaatcacaagcgttcctatacaccaataa

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_8|526_aa
MGCLGTQIAPRAFLLLPLPLYFTPLSSVTCISSSGVRKWPSGSLIVYYGKTIVASPDGST
LPLEAEVSNPAEDRVSRPVLHFRVVMVNTECQLDWIEGCKVLIPDVSPSSGGKADAGLRV
GNVGPGAGGFRAAWRGVAWRGALRAVTRFSLPRAAPLRPLPRDPEDALGPQGDGSNGPLC
APGVPRPLQGYLGAEPRRVSVPRGPPIPGCLSPRQHPPSPTPILPGSASRFPRDSPDRKP
TFSFASDATGSSAAAASSATAPSSHGNPLGDPGHRERGRLSGLSTGCASAGSVNVLIAIR
LKLQSIHICELSDCICHLQFQSDTGRCDLRGGKLNFKTTPMDADSDVALDILITNVVCVF
RTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFG
ARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCY
RIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIYPFVFESRKEIL

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_8|1581_bp
atgggctgcttggggacccagattgctcccagggcctttctgctgctacctctacccctg
tatttcactccactcagctctgtaacttgcatcagctccagtggtgtaaggaaatggcca
agtggtagtctcatagtctattacggcaaaaccattgttgcatctcctgatggaagcact
cttcccttggaggctgaggtctctaacccagcagaagacagagtttccaggccagttcta
cattttagggttgtgatggttaatactgagtgtcaacttgattggattgaaggatgcaaa
gtattgattccggatgtgtctccgagctctggtggaaaggccgatgccggcctgagagtg
ggaaacgtggggccgggagccgggggcttccgcgcggcgtggcgtggcgtggcgtggcgt
ggcgccctcagggccgttacgcgattttcgctcccgcgggcagcgcctctcaggccactc
ccgagggaccccgaggacgcactcgggccccagggcgacggttcaaacgggccattgtgc
gcccccggggtcccccggcccctgcagggctacttgggcgcagagccgcggagggtctcc
gttcctagaggtcctcctatcccgggctgcctgagtcctcgccagcatccgccctctccc
actcccatccttcctggatccgcctctcggttcccgagggacagtcccgaccgcaaaccc
accttctccttcgcatccgacgcaaccggcagcagcgctgccgccgcgtcctcagccacc
gctccctcttcccacggtaaccccctaggcgaccctgggcacagggagcgcgggcggctg
agcggcctgagcaccggatgtgcatctgcaggctctgtcaatgtgctcattgcaataaga
ctcaaactgcagtcaatccacatctgtgagctctctgactgcatctgtcacctgcagttc
caaagcgacactggcagatgtgatcttcgtggtggaaagctaaattttaaaaccacccca
atggatgcagacagtgatgttgcattggacattctaattacaaatgtagtctgtgttttt
agaacaagatgtcatttaaacttaaggaagattgctttggaaggagcaaatgtaatttat
aaacgtgatgttggaaaagtattaatgaagcttagaaaacctagaattacagctacaatt
tggtcctcaggaaaaattatttgcactggagcaacaagtgaagaagaagctaaatttggt
gccagacgcttagcccgtagtctgcagaaactaggttttcaggtaatatttacagatttt
aaggttgttaacgttctggcagtgtgtaacatgccatttgaaatccgtttgccagaattc
acaaagaacaatagacctcatgccagttacgaacctgaacttcatcctgctgtgtgctat
cggataaaatctctaagagctacattacagattttttcaacaggaagtatcacagtaaca
gggcccaatgtaaaggctgttgctactgctgtggaacagatttacccatttgtgtttgaa
agcaggaaagaaattttataa

>gi568815592f:133789398_133991799|GENSCAN_predicted_peptide_9|63_aa
XNITTSGYGTQAIIDDDVQITEDTINDIQTSGQFPHVLFYDGHLYQQRGFHPHNDELFSY
FSS

>gi568815592f:133789398_133991799|GENSCAN_predicted_CDS_9|192_bp
nngaatatcactacctcaggttacggtacacaggctataattgatgatgatgttcagata
actgaagacacaataaatgacattcagacatcaggacaattccctcatgttcttttctat
gatggccacctgtaccagcaacgtgggtttcacccacacaacgatgaactgttctcttac
ttctccagttga