GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:03:18

Sequence gi568815591r:97887047_98090104 : 203058 bp : 46.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10211  10281   71  1  2   91  104    36 0.025   6.02
 1.02 Intr +  13614  13720  107  0  2   22   93    66 0.004   0.36
 1.03 Intr +  36658  36831  174  2  0   24   84   154 0.656   8.51
 1.04 Term +  37176  37240   65  1  2   86   42    67 0.668  -0.05
 1.05 PlyA +  38104  38109    6                               1.05

 2.03 PlyA -  38245  38240    6                              -1.75
 2.02 Term -  39510  39345  166  2  1   96   41   177 0.882  11.19
 2.01 Init -  41254  40974  281  1  2  109   37   157 0.827   9.21
 2.00 Prom -  48119  48080   40                              -8.86

 3.09 PlyA -  50828  50823    6                               1.05
 3.08 Term -  51880  51360  521  2  2   52   55   479 0.993  35.46
 3.07 Intr -  58569  58462  108  1  0   56   62    61 0.293   0.56
 3.06 Intr -  60136  59936  201  2  0   55   72    94 0.288   3.76
 3.05 Intr -  63473  63378   96  0  0  116   75    36 0.633   5.08
 3.04 Intr -  64916  64752  165  0  0   66   55    98 0.636   4.23
 3.03 Intr -  65483  65220  264  0  0   62   76   124 0.381   6.08
 3.02 Intr -  68838  68737  102  1  0  -22   68   133 0.470   0.45
 3.01 Init -  72608  72524   85  2  1   90  101    -3 0.619   2.25
 3.00 Prom -  74012  73973   40                              -9.36

 4.05 PlyA -  75152  75147    6                               1.05
 4.04 Term -  79996  79612  385  0  1   88   42   321 0.748  21.86
 4.03 Intr -  81752  81718   35  2  2   97   34   -14 0.384  -8.88
 4.02 Intr -  82006  81959   48  1  0   89  121    81 0.796  10.38
 4.01 Init -  85208  85089  120  2  0   94   69   182 0.799  15.39
 4.00 Prom -  97409  97370   40                              -7.16

 5.05 PlyA -  97458  97453    6                               1.05
 5.04 Term -  97937  97912   26  0  2  130   42     2 0.567  -1.81
 5.03 Intr - 100110 100001  110  2  2   82   75   137 0.761  11.73
 5.02 Intr - 101502 101370  133  1  1   69   71   163 0.852  12.40
 5.01 Init - 103058 102998   61  2  1   49   75   103 0.956   6.51
 5.00 Prom - 104092 104053   40                              -3.56

 6.00 Prom + 105650 105689   40                              -6.56
 6.01 Init + 110585 110668   84  1  0   65   64    56 0.060  -0.28
 6.02 Intr + 134751 134961  211  2  1  128   95    45 0.942   7.69
 6.03 Term + 137030 137208  179  0  2   59   43   141 0.981   4.55
 6.04 PlyA + 138113 138118    6                               1.05

 7.03 PlyA - 140189 140184    6                               1.05
 7.02 Term - 164473 164233  241  0  1   65   34   163 0.110   4.10
 7.01 Intr - 199463 199337  127  0  1   37   91    83 0.204   3.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  10211  10372  162  1  0   91   48   178 0.970   8.69


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_1|138_aa
MAYRLKCKTHNYKNAEDNLGNTIRTHGSYCKWSLNDFISCSEKKSPSAPIVEEEVWIGPA
TSANESNVNFLSLPDTVSPEIRLDHSPPVPDRSVSPLEHIPRIFPKPGTGLHTSTPSSNR
NVLHVFFLLKGLSTNMRR

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_1|417_bp
atggcctacagacttaaatgtaaaacccataactataaaaacgctgaagacaacctaggc
aataccatccgtacacatggctcctactgcaaatggtctctaaatgacttcatcagttgc
tcagaaaaaaaatcaccctctgctccaatcgtggaggaagaagtatggattggacctgca
acctcagccaatgagtccaacgtcaacttcctgtccttgcctgacactgtcagccctgag
atcagacttgaccattcacctccagtacctgataggtccgtcagtcctttggaacatatc
ccacgaatattccctaaaccaggcaccggactccacacatcaacaccgtcatctaacagg
aatgtgcttcatgtcttcttcctgctcaaaggactgtccaccaacatgcgcaggtag

>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_2|148_aa
MASPSGSSKATGKPRGRDGRPRREEDDVPPEEKRLRLLLEGGSAQPQDCEDGEDAPRPGR
EETGTQTGGDGRGVSDAGAGVRGCRERGGAGDAGFYGNTLFEEPMKKCQAGVRISSDFFE
EESLFLHSQAMSEWIKKNRVPFYEILSV

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_2|447_bp
atggccagcccttccggcagctccaaagccactggcaagccccgaggcagggatggccgg
cccaggagggaggaggacgacgtccctcccgaagagaagaggctgcggctcttgctggag
gggggaagcgcacagccccaggactgcgaggacggggaggacgcgccgcggccgggcagg
gaggagaccggcacccagacaggtggcgacggcagaggagtaagtgacgcgggcgcgggg
gtccgggggtgccgggagcgcgggggtgctggggacgcgggtttctatgggaatactctc
tttgaagaacccatgaagaagtgtcaggctggtgtgaggatcagcagtgatttctttgag
gaggagagcctgtttcttcactcacaggccatgtctgagtggatcaagaagaacagagtg
cccttttatgagattttgtctgtgtag

>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_3|513_aa
MRAVISPPSPTLDITIHIAGGRGCPPRCDDIRINITGWVYTYCDIERHIMLSPSLDIRNN
ITESPVEHDCVKLLDSVDSSRPDIRDQPWASVDWELYVHGSSFFNPQGERVAGYAVITLD
TVVEARSLPQATSAQKAELIAFIRALELSEAPDLRPAYSKEEKDFLQVEGQVMEEGWIRL
PDGRVAVPQLRGAAVVLAVQETTHRDIRKNVTGDVNTSAILRVVSSSPPLHIGNNITGIG
MYLTSAVSPPPSNGVVASVMYAAVTPMLNPFIYSLRNRDIQSALRRVLSRTVEFHDLFHP
FSCVEICFNEETVVYTPNEVLFSLKRKKLLSAADKMDEIAGCSKNRGTISNHLFPQRCDE
SKSQVAPYIQLKNIKSYARGLQLELWRRQLSLGLARGVDLGTPQKGPMWRLTERRQKAHR
MLKLYNGLSEGEAVGLPAGPDPLDPTDLNGAHFDPEVYLDKLPRECSLAQLMDSETDMVQ
QIRALDSDMQTLVYENYDKFIPATEIDKQHKTL

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_3|1542_bp
atgcgggcagtaatatcgcccccctctcccaccctggatattacgatccacatcgcaggg
gggcgagggtgcccaccgagatgcgatgatattcggatcaatatcaccgggtgggtgtac
acctactgcgatattgaacgtcatatcatgctctctccctccctggacattaggaacaat
atcactgagagccctgtcgagcatgattgtgtaaaattgttggactcagttgactctagc
agacctgacatccgggaccagccttgggcatcagtagactgggaactatacgtgcatggg
agcagcttcttcaacccccaaggagagagagttgcagggtatgcagtgataaccctggac
actgttgttgaagccagatcgttgccccaggccacttcagcccagaaagctgaactcatt
gctttcattcgggccttagaactcagtgaggcacctgatcttagacctgcttattctaaa
gaagaaaaggactttctccaggtagagggacaagtgatggaagaaggatggattcggtta
ccagatgggagagtagctgtgccacagctgcgaggagctgcagttgtactggctgtgcaa
gaaaccacccatcgagatattaggaaaaatgtcactggggatgtgaacacctctgcgata
ttgagagtagtatcatcctctccccccttgcatattgggaacaatatcacaggcattggc
atgtacctgacttcagctgtgtcaccaccccccagcaatggtgtagtggcgtcagtgatg
tatgctgcggtcactcccatgctgaaccctttcatctacagcctgagaaacagggacata
caaagtgccctgcggagggtgctcagcagaacagtcgaatttcatgatctgttccatcct
ttttcttgtgtggaaatttgtttcaatgaagaaactgtggtatacacacccaatgaagta
ttattcagcctaaaaaggaagaaactcctctccgctgcagacaaaatggatgagattgca
ggttgcagtaaaaacaggggtaccataagcaaccacctctttcctcaacgatgtgatgaa
agcaaaagccaagtagctccatatatccaacttaaaaatataaaaagttacgcccgtggg
ctgcagttggagctatggcggcggcagctgtcactgggcctagcccggggtgtggacctg
gggactccccaaaagggcccgatgtggaggctcacggagcgtcggcagaaggcgcacagg
atgctaaagctttacaacggcctctcggaaggggaggcggtgggactccccgcggggccc
gaccccctggaccccactgatctgaacggggcgcatttcgacccggaagtttacctagac
aagctgcctagagagtgctctctggcccagctgatggacagtgagacggacatggtgcag
cagatccgggctctagacagcgacatgcaaaccctggtctatgagaactacgataagttc
atcccagccacagaaattgacaaacagcataaaactctatga

>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_4|195_aa
MAAAAAGAGSGPSAAQEKQFLPALLSFFIYNPRFWPREGEDKVYSSVLQQCYSMYKPYSR
NVSPLMKKQRCPNYADPQNLTDVSIFLLLEVSGDPELQPVLAGLFLSMCLVTVLGNLLII
LAISPDSHLHTPMYFFLSNLSLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLFAI
FGGMEERHAPECDGL

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_4|588_bp
atggctgcagcggcggccggggctgggagcgggccctcggcggcccaggagaagcagttc
ctgccggcgctgctgagtttcttcatctacaacccgcgcttctggccgcgggaaggagag
gacaaggtttatagctcggtgctgcagcagtgctacagcatgtacaagccttatagtagg
aatgtgtccccattgatgaaaaagcaaaggtgtccaaattatgcagacccacagaatcta
acagatgtctctatattcctcctcctagaagtctcaggggatccagaactgcagccagtc
cttgctgggctgttcctgtccatgtgcctggtcacggtgctggggaacctgctcatcatc
ctggccatcagccctgactcccacctccacacccccatgtacttcttcctctccaacctg
tccttgcctgacatcggtttcacctccaccacggtccccaagatgattgtggacatccag
tctcacagcagagtcatctcctatgcaggctgcctgactcagatgtctctctttgccatt
tttggaggcatggaagagagacatgctcctgagtgtgatggcctatga

>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_5|109_aa
MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD
EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_5|330_bp
atgagcatcacggacgtgctcagtgctgatgacattgcagcagcgctccaggaatgccaa
gacccagacacttttgaaccccaaaaattcttccagacgtcaggcctctccaagatgtca
gccagtcaggtgaaggatgttttccggttcatagacaacgaccagagcgggtatctggat
gaagaagagcttaagtttttcctccagaagtttgagagtggtgccagagaactgaccgag
tcagaaaccaagtccttgatggctgcggcggataatgatggagatgggaaaattggagca
gaggaattccaggaaatggtgcattcttaa

>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_6|157_aa
MRLWFTAVLTSWAQAILPSWPPNVVVLQAGPPLSHVTHSAITPCSHPSYVLTFTQDEKVP
HRVQATSPCPMTYVPSLPKGSFSPYLAPFTRPKGSPCAGKADLTLHVDGVTVLNVGKESL
SSQLRQQKPETGAKKKDPAGLGWKVLDAQLFTPTQCM

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_6|474_bp
atgcgattgtggttcaccgcagtcttgacctcctgggctcaagccatcctcccttcttgg
cctcccaatgtggtggtattacaggccgggcctccactttctcatgtcacccactctgct
attactccatgctcccatccttcctacgtccttactttcacccaggatgagaaagtgccc
caccgtgtccaggccacatcaccttgtcccatgacctatgtcccttccctccccaaggga
agcttcagcccataccttgcgccatttacccggcccaagggctctccctgcgcaggaaag
gccgacctcacactgcatgtggatggcgtgacagtcctgaatgtggggaaagagagcttg
tcctcgcagctacgtcaacagaagccagagactggggccaagaagaaagaccctgcgggg
ttgggctggaaagtcctggacgcccagctcttcacacccactcagtgcatgtga

>gi568815591r:97887047_98090104|GENSCAN_predicted_peptide_7|122_aa
XTLLATRLLPQAHKTEGVTCCVSFYQASWNRLGELVPDWHMGRVADAVTRDPVGQDNAVL
YIQEVPPLIHSWGPLAERAIREATGGAPELVVATGPALRRRPGYHGYSRAGAEPNRIPEV
GN

>gi568815591r:97887047_98090104|GENSCAN_predicted_CDS_7|369_bp
nccactctgctggccacacgacttttgccccaagcccataaaaccgagggagtcacctgc
tgcgtcagtttctaccaggccagctggaacaggctgggcgagttggtgccagactggcac
atgggcagggtggcagatgcagttacaagggacccagtgggacaggacaacgctgttctt
tatattcaagaagtgccccctttgattcatagctggggacccctcgccgagcgggccatc
agagaggccaccggtggcgccccggagctcgtcgtggcgactggtccagccttgcgaagg
agacctggttaccatggatacagcagggcgggggcggagccaaaccggatcccggaagtg
ggtaattag