GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:35:39

Sequence gi568815591r:132934610_133135920 : 201311 bp : 39.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4010   4304  295  2  1   40   43   309 0.533  15.39
 1.02 PlyA +   5151   5156    6                               1.05

 2.00 Prom +  10763  10802   40                              -6.55
 2.01 Sngl +  19954  20205  252  0  0  117   42   165 0.126   9.64
 2.02 PlyA +  20978  20983    6                               1.05

 3.04 PlyA -  21066  21061    6                               1.05
 3.03 Term -  39346  39248   99  1  0   82   43    80 0.912   0.05
 3.02 Intr -  40677  40560  118  2  1   69  105   142 0.981  13.55
 3.01 Init -  49530  49316  215  0  2   97   63    96 0.642   6.26
 3.00 Prom -  56606  56567   40                              -6.65

 4.00 Prom +  56761  56800   40                              -3.35
 4.01 Init +  59763  59865  103  2  1   74   82    72 0.490   5.65
 4.02 Term +  62055  62311  257  1  2   34   39   203 0.479   4.76
 4.03 PlyA +  62357  62362    6                               1.05

 5.00 Prom +  67999  68038   40                              -4.75
 5.01 Init +  72591  72645   55  2  1   48  116    21 0.410   2.40
 5.02 Term +  76417  76544  128  2  2   39   54   156 0.947   4.76
 5.03 PlyA +  77179  77184    6                               1.05

 6.00 Prom +  77597  77636   40                              -4.55
 6.01 Init +  81910  81957   48  0  0   56   74    32 0.621  -0.40
 6.02 Term +  82066  82239  174  0  0   71   48   146 0.928   5.68
 6.03 PlyA +  82769  82774    6                               1.05

 7.00 Prom +  83570  83609   40                              -6.25
 7.01 Init +  85338  85419   82  2  1   58   84    39 0.807   1.68
 7.02 Term +  86031  86140  110  1  2   32   49   156 0.765   3.79
 7.03 PlyA +  86957  86962    6                               1.05

 8.02 PlyA -  88178  88173    6                               1.05
 8.01 Sngl - 101311  99998 1314  1  0  108   47  1538 0.999 147.50
 8.00 Prom - 118546 118507   40                              -4.75

 9.00 Prom + 121231 121270   40                              -5.25
 9.01 Init + 125765 125930  166  1  1   71  110    76 0.531   7.94
 9.02 Term + 133957 134108  152  2  2   88   44    96 0.450   2.29
 9.03 PlyA + 134251 134256    6                               1.05

10.09 PlyA - 135061 135056    6                               1.05
10.08 Term - 135620 135516  105  2  0   84   28   184 0.770   9.43
10.07 Intr - 147355 147248  108  1  0   65  100   144 0.117  12.86
10.06 Intr - 153547 153490   58  0  1  132   85    -2 0.004   1.87
10.05 Intr - 162097 162070   28  2  1   97   87    36 0.050   0.66
10.04 Intr - 164236 164203   34  1  1   78   64    46 0.007  -1.92
10.03 Intr - 183155 182884  272  0  2   58   57   189 0.687   9.14
10.02 Intr - 183600 183450  151  0  1  -11   91   159 0.414   5.11
10.01 Intr - 198335 198103  233  0  2  117   27   126 0.100   5.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 155319 155191  129  0  0   86   11   135 0.950   5.80
S.002 Term - 198335 198079  257  0  2  117   49   143 0.830   8.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_1|98_aa
XKSAYRMEIGMQESYPHKPQSKLTALLHWAHTLNLQCVPDTGNKQTGKEKVPRTFRSLSP
GEMRRRVLQEEMRLRGLHNPLTPLGVKLSACLGAGDTW

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_1|297_bp
nngaaaagtgcctatcgaatggaaattggaatgcaagaaagctatccccataagccacag
tccaaactgacagctctcctccactgggctcacactttaaacctgcagtgtgtccccgac
accggcaacaagcaaacaggaaaggagaaggttcccaggacgtttagatctctgagccct
ggggagatgaggagaagagtgctccaagaggagatgcggctgcgaggtctacacaaccca
ctgaccccactgggtgtgaagttgagtgcatgtttgggagcaggggacacttggtag

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_2|83_aa
MGPPQPSTWAVFSISTKDGLYNVQRQGEPTAAGPIPQMVQFPTFHKILPRKATRTAAVPL
RGQVEQISPFCMHSTSLAICLYL

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_2|252_bp
atggggccaccacagccctcaacctgggctgtcttcagcatctcaacaaaagacggactc
tacaatgttcagagacaaggggagcccacagcagcaggcccaattcctcagatggtacaa
ttcccaacattccacaaaatcctgcccagaaaagccaccaggacagcagcagtcccactg
aggggccaagtagagcagatatctccattctgtatgcactcgacgtccctcgccatctgc
ctgtacctctag

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_3|143_aa
MAAVQSSFGSASGGDRGKRGRGRPWGEGDHGERETVGRGRPWGEGDRGERERRERERRSL
SEKLYFQYKIKRLKQAKELDRERAAANEQLTRAILRERICSEEERAKAKHLKPRCYSSEP
LVLIGAQLGTHWTGKMGPWNGEL

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_3|432_bp
atggcagcagtacagtccagctttggctcggcatcagggggagaccgtggaaagagaggg
agagggagaccgtggggagagggagaccatggggagagggagaccgtggggagagggaga
ccgtggggagagggagaccgtggggagagggagaggagggagagggagaggaggagcctt
tccgagaagttgtattttcaatacaagattaaaagactaaagcaagccaaagagctggac
cgagagagggctgctgccaatgagcagttaaccagagccatccttcgggagaggatatgt
agcgaggaggaacgcgctaaggcaaagcacctgaaacccagatgttactcctcggaacct
ttagtcctcattggagcacagttgggaactcactggacagggaaaatgggaccatggaat
ggagaactttga

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_4|119_aa
MALSKHYTEVSSRLNFMASTYSMMLEKDTANCCKELAILPSPVANQQPNVEEISKGKRQR
CDAEGVCSPGFRNGPFTTEQPFKKKNTVGWDAKQGEGTARLTIVKNIFGILPTCYTNVS

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_4|360_bp
atggctttgagtaaacattacacagaagtaagttcaagattaaacttcatggccagcacc
tattctatgatgttagagaaagacaccgccaattgctgtaaagaattggcaatccttcca
agccctgtcgctaatcagcaacctaatgtggaagagataagcaaagggaagaggcagcgg
tgcgatgctgagggagtgtgctcaccaggctttcgaaacggaccatttactacagagcag
cctttcaagaagaaaaacaccgtggggtgggacgcaaagcaaggggaagggactgcaaga
ttaactatcgttaaaaacatcttcggcatactgcctacatgctacacaaatgtttcataa

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_5|60_aa
MIKHRRADQANKELTMAQGLFGKNCDSKRESAMQNMKCKYSGQGAIGTNRFGSRCGRSVQ

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_5|183_bp
atgataaaacacagaagagcagaccaggctaataaagaattgacaatggcacaagggtta
tttgggaaaaactgtgatagtaagagggagtcagccatgcaaaatatgaagtgcaaatat
tctggacaaggagctataggcacaaacaggtttggcagccgatgtggccgaagtgttcaa
tga

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_6|73_aa
MGYSCLTVCSNQEKKGLEAILAKLWRSGGETGTLSEYSPVFPDPAQKDLTLFSSVPNTAL
PTGSTDGFQKAQD

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_6|222_bp
atgggctactcctgtttaacagtttgctccaaccaagaaaagaaggggctcgaggctata
ttggcaaagctatggaggtcaggaggggaaacagggactctctctgaatattctccagta
tttccagatcctgcacagaaggacctcacactcttctccagtgttcctaacacagcatta
ccaacaggatcaacagatggcttccagaaggcccaggactaa

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_7|63_aa
MVSYNPNTPLSITAKTDCRQRHLLWILGGSPAAVVIACTEASKFAELLSAARKNSRNKSG
AIF

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_7|192_bp
atggtcagctataatccaaacacaccattgagtatcacagcaaaaacagactgccgacag
aggcatttactctggattctcggcggcagtcctgctgctgttgtcattgcttgcacagaa
gcatcaaaatttgcagaactgctgtcagcagctcggaaaaattccaggaataagagtgga
gcaatcttttaa

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_8|437_aa
MAAGTLYTYPENWRAFKALIAAQYSGAQIRVLSAPPHFHFGQTNRTSEFLRKFPAGKVPA
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
MHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
RRAFRNTNRWFLTCINQPQFRAVLGELKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE
KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE
DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGREETQTLVREYFSWE
GAFQHVGKAFNHGKIFK

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_8|1314_bp
atggcggctgggaccctgtacacgtatcctgaaaactggagggccttcaaggctctcatc
gctgctcagtacagcggggctcagatccgcgtgctctccgcaccaccccacttccatttt
ggccaaaccaaccgcacctctgaatttcttcgcaaatttcctgccggcaaggtcccagca
tttgagggtgatgatggattctgtgtgtttgagagcaacgccattgcctactatgtgagc
aatgaggagctgcggggaagtactccagaggcagcagcccaggtggtgcagtgggtgagc
tttgctgattccgatatagtgcccccagccagtacctgggtgttccccaccttgggcatc
atgcaccacaacaaacaggccactgagaatgcaaaggaggaagtgaggcgaattctgggg
ctgctggatgcttacttgaagacgaggacttttctggtgggcgaacgagtgacattggct
gacatcacagttgtctgcaccctgttgtggctctataagcaggttctagagccttctttc
cgccgggcctttcgcaataccaaccgctggttcctcacctgcattaaccagccccagttc
cgggctgtcttgggggaactgaaactgtgtgagaagatggcccagtttgatgctaaaaag
tttgcagagacccagcctaaaaaggacacaccacggaaagagaagggttcacgggaagag
aagcagaagccccaggctgagcggaaggaggagaaaaaggcggctgcccctgctcctgag
gaggagatggatgaatgtgagcaggcgctggctgctgagcccaaggccaaggaccccttc
gctcacctgcccaagagtacctttgtgttggatgaatttaagcgcaagtactccaatgag
gacacactctctgtggcactgccatatttctgggagcactttgataaggacggctggtcc
ctgtggtactcagagtatcgcttccctgaagaactcactcagaccttcatgagctgcaat
ctcatcactggaatgttccagcgactggacaagctgaggaagaatgccttcgccagtgtc
atcctttttggaaccaacaatagcagctccatttctggagtctgggtcttccgaggccag
gagcttgcctttccgctgagtccagattggcaggtggactacgagtcatacacatggcgg
aaactggatcctggcagagaggagacccagacgctggttcgagagtacttttcctgggag
ggggccttccagcatgtgggcaaagccttcaatcacggcaagatcttcaagtga

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_9|105_aa
MAEPRDVCYERRAQVPQAHTGGASHQDWVSLKVSWGKWFLGRDLNNEQEFARQKADCEDF
CVHSTGGKSEAGSQLRDFHRRRQLSIWIGDIAEETDAKGTYLDMF

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_9|318_bp
atggcagaaccacgtgacgtgtgctacgagagacgtgcacaggtaccacaggcccacaca
ggtggggcatctcaccaggactgggtgtcattaaaagtttcctggggtaagtggtttcta
ggcagggatctgaacaatgagcaggagtttgctagacaaaaggcagattgtgaggacttc
tgtgtgcacagcacagggggaaagagtgaagcagggagccagttaagagacttccacaga
agacgacagttatctatctggattggagatatagcagaggagacagatgcaaaaggaaca
tatttagacatgttttag

>gi568815591r:132934610_133135920|GENSCAN_predicted_peptide_10|329_aa
XMPYTVKQFVHCTAPGLYLHRPQCDRLSNPSHASSGRSFLILSQSTGLSLQWTLKDATRR
ASDPSLQKGPRPPEEFSLWKGLGKGVNAKKCESLRPFRILTIKVEVKQGWMKTQDKEECT
SGDWHGDTAHGFPGKTFLLNRYTVYCVMQGIVANATLAGTGAGGYWHVILQKGHLAIVTD
GFVCWHVVESTGPLSMKVISWEGISELIPNPRTFSGIVEAALSIEEALGPGSISVENPDS
IHCKDLTWWKREKEQRSWKVSAGAGTGIMGGTTSTRRVTFEADENENITVVKGIRLSENV
IDRMKESSPSGSKSQRYSGAYGASGIAEF

>gi568815591r:132934610_133135920|GENSCAN_predicted_CDS_10|990_bp
nggatgccgtatacagttaaacagtttgtgcactgcacagctccagggctgtatttacac
agaccacaatgtgatcggctatctaatccctcacatgcttcctctgggaggtcttttctg
atcctctcacagtccacgggactctcccttcagtggacactcaaagatgctaccagacgc
gcctctgaccccagtctccagaaaggaccacgccctccagaagaattctcactgtggaag
ggattaggcaagggtgtgaatgccaagaagtgtgaatccctgaggccatttcggatcctt
accataaaagtggaagtgaaacaaggttggatgaagacacaggacaaggaggaatgtacc
agtggggactggcatggggatacagctcatggcttccctgggaagaccttcttgctgaat
cggtacacagtttattgtgtcatgcagggcattgttgctaatgccacattggctggcact
ggggctggtggctattggcatgtcatcctacagaaagggcaccttgccattgtgacagat
ggattcgtgtgctggcatgttgtggaatcaacaggtccattaagtatgaaagtgataagc
tgggaagggatttcagaactaataccgaatcctaggacatttagcggtattgttgaggct
gccctctctatagaagaggccctggggccaggttcaatttctgtggagaaccctgacagc
attcattgcaaagatttgacgtggtggaaaagggaaaaagaacaaaggagttggaaggtc
tccgctggggcaggaaccggaatcatgggtgggaccaccagcacccgccgggtcaccttc
gaggcggacgagaatgagaacatcaccgtggtgaagggcatccggctttcggaaaatgtg
attgatcgaatgaaggaatcctctccatctggttcgaagtctcagcggtattctggtgct
tatggtgcctcaggtattgctgaattttaa