GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:44:19

Sequence gi568815591r:129310116_129510370 : 200255 bp : 41.73% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  35933  35979   47  1  2   69  116    34 0.733   4.51
 1.02 Term +  42081  42291  211  0  1  107   49   111 0.620   4.88
 1.03 PlyA +  42761  42766    6                               1.05

 2.00 Prom +  46852  46891   40                              -5.15
 2.01 Init +  65755  65811   57  0  0   69   94    31 0.805   3.16
 2.02 Intr +  69526  69634  109  0  1   78  109   103 0.839  10.34
 2.03 Intr +  78941  79084  144  0  0   64   98   179 0.649  15.83
 2.04 Intr +  79519  79619  101  2  2   75   68    75 0.979   3.11
 2.05 Intr +  87107  87209  103  1  1   97   83   160 0.722  15.23
 2.06 Intr +  90175  90269   95  2  2  115   64    54 0.816   4.46
 2.07 Intr +  93264  93370  107  2  2   66  110    86 0.978   6.69
 2.08 Intr +  94982  95098  117  2  0  103   30   110 0.968   5.36
 2.09 Intr +  95721  95784   64  0  1  104   57    52 0.982   1.50
 2.10 Intr +  96263  96351   89  1  2  138  107   113 0.915  16.05
 2.11 Intr +  99361  99431   71  1  2   44   80   117 0.175   4.41
 2.12 Term +  99592  99617   26  2  2   78   39    31 0.182  -5.39
 2.13 PlyA +  99710  99715    6                              -3.94

 3.02 PlyA -  99723  99718    6                               1.05
 3.01 Sngl - 100255  99998  258  1  0   39   44   401 0.595  25.68
 3.00 Prom - 107347 107308   40                              -6.15

 4.00 Prom + 107874 107913   40                              -6.95
 4.01 Init + 108824 108883   60  1  0   46  111    36 0.613   3.00
 4.02 Intr + 112680 112823  144  2  0  108   94    77 0.535   9.86
 4.03 Intr + 114948 115026   79  2  1  102  106   102 0.996  11.61
 4.04 Term + 116328 116560  233  1  2   68   46   149 0.886   4.35
 4.05 PlyA + 116685 116690    6                               1.05

 5.00 Prom + 117460 117499   40                              -8.75
 5.01 Init + 124358 124551  194  1  2   93   45   152 0.601   9.75
 5.02 Intr + 124788 125003  216  0  0   43  105    88 0.404   2.70
 5.03 Intr + 125993 126144  152  2  2  106   68    10 0.893  -0.31
 5.04 Intr + 126227 126530  304  0  1   53   50   177 0.333   5.12
 5.05 Intr + 133554 133716  163  0  1   73   36    83 0.111   0.66
 5.06 Intr + 133909 133983   75  0  0  108   86    57 0.114   6.29
 5.07 Intr + 135295 135390   96  0  0   54  101    66 0.110   3.79
 5.08 Intr + 135590 135787  198  1  0   53   83   101 0.097   4.73
 5.09 Term + 135836 136087  252  1  0   57   38   134 0.093  -0.05
 5.10 PlyA + 136126 136131    6                              -1.95

 6.03 PlyA - 136244 136239    6                              -0.45
 6.02 Term - 137088 136759  330  0  0    9   48   336 0.955  15.37
 6.01 Init - 137732 137352  381  2  0   31   77   336 0.031  23.72
 6.00 Prom - 138420 138381   40                              -3.45

 7.00 Prom + 138898 138937   40                              -9.75
 7.01 Init + 139410 139473   64  2  1   94   22    61 0.114   1.46
 7.02 Intr + 141498 141632  135  1  0   59  113   148 0.142  14.02
 7.03 Intr + 143112 143232  121  1  1  101   24   105 0.587   4.03
 7.04 Intr + 144027 144095   69  0  0   94  109    71 0.988   7.18
 7.05 Intr + 144306 144412  107  0  2   79   60   103 0.986   5.54
 7.06 Intr + 145129 145256  128  2  2  130  101    71 0.989  12.08
 7.07 Intr + 146324 146527  204  1  0  116   51   212 0.998  18.77
 7.08 Intr + 148100 148335  236  1  2  116   96   295 0.963  28.66
 7.09 Intr + 148597 148662   66  1  0   59   92    84 0.859   3.00
 7.10 Intr + 149402 149654  253  2  1   79   76    64 0.561   0.81
 7.11 Intr + 150186 150257   72  2  0   80   85   104 0.905   7.98
 7.12 Intr + 152851 152925   75  0  0   46   91    61 0.449   0.99
 7.13 Intr + 153929 154026   98  1  2   91   78    50 0.529   2.19
 7.14 Intr + 154176 154252   77  0  2  117   68    56 0.713   4.74
 7.15 Intr + 154513 154835  323  2  2   83   89   163 0.466  10.55
 7.16 Intr + 155752 155880  129  0  0   53   71    69 0.733   1.67
 7.17 Intr + 160472 160600  129  1  0   42  107   121 0.844   9.37
 7.18 Intr + 170670 170774  105  2  0   58  101    56 0.856   3.39
 7.19 Intr + 172727 172931  205  1  1   48  101   181 0.939  13.25
 7.20 Intr + 175464 175666  203  1  2   97   22   200 0.426  12.38
 7.21 Term + 186053 186103   51  1  0  113   44    82 0.622   2.75
 7.22 PlyA + 186376 186381    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 134281 134176  106  2  1   53   75    84 0.811   1.95
S.002 Intr - 137753 137352  402  2  0   53   77   349 0.961  24.00
S.003 Intr - 138256 138096  161  2  2   50   93    92 0.809   4.69
S.004 Intr + 141503 141632  130  1  1   48  113   150 0.826  12.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_1|85_aa
MVTEKIIREDLWDKRRETMVIQVWASGRYFLENERSEPVSRKLTVFVVNDKIQAFKWKLE
FWKTQTRHHELDSFQSSCPRCRPRI

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_1|258_bp
atggtaacagaaaagattatcagagaggatttgtgggataagagaagagagaccatggtt
attcaggtttgggcatctggcagatattttcttgaaaatgaacgaagtgagcctgtctca
aggaaactgacagtatttgttgtcaatgataaaattcaagctttcaaatggaaattagaa
ttttggaaaacccaaacccgccaccatgagcttgacagcttccagtcaagctgtccccgg
tgtagacctcgtatttga

>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_2|360_aa
MLGSKKKYIVNGNSGIKAQIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSAASYT
DSSDDETSPRDKQQKNSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKP
LAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKG
ESEDDFWWCIDRCVNVEGWQPNMILDDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRL
YQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDMMFGGKQVVVCGYGEV
GKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTELRPKVYD

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_2|1083_bp
atgctgggcagcaagaagaaatacattgttaatggcaactctgggattaaggcccagatc
cagtttgctgaccagaagcaagaattcaacaaacgtcccaccaaaattggacgtcgctct
ttgtctcgttccatttctcagtcatctactgacagctacagctcagcggcttcatataca
gatagctctgatgatgagacatcgcccagggacaagcagcaaaagaactctaagggaagc
agtgacttctgtgttaagaacatcaaacaggcagagtttggacgaagagaaattgaaatt
gctgaacaagaaatgcctgcattgatggctttgaggaagagagctcaaggagaaaagcct
ttggctggagccaaaatcgtgggttgcacacacatcactgctcagactgctgtgcttatg
gaaactctgggtgctctgggggcccagtgccgatgggctgcctgcaacatctattccact
ctcaatgaagtggctgctgctctagcagaaagtggatttcctgtttttgcctggaaggga
gagtcagaagatgacttttggtggtgtatcgatagatgtgtgaatgtggagggctggcag
ccaaacatgatcttggatgatggaggggatcttacccactggatttataaaaagtatccc
aacatgtttaagaaaatcaagggcatagtagaggagagtgttactggagttcacaggctg
taccaactgtccaaagctgggaagctgtgtgttccagccatgaatgtcaatgactcagtc
accaaacagaaatttgacaacctctactgttgccgtgaatcaattcttgatggacttaaa
aggacaacagacatgatgtttggtggaaagcaagtggtagtctgtggctatggagaggtg
gggaaagggtgctgtgctgccctgaaagccatgggctccattgtgtatgtaactgaaatt
gaccccatctgtgccctgcaagcctgtatggatggatttcgactggtgaaattaaatgag
gtcatccgacaagtggacattgttattacctgtacagagctccgaccaaaggtatacgat
tag

>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_3|85_aa
MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM
INDRIGYKPQPKPNNRSSQFGSLEF

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_3|258_bp
atgctgagacggaaaccaacacgcctagagctaaagcttgatgacattgaagagtttgag
aacattcgaaaggacctggagacccgtaagaaacagaaggaagatgtggaagttgtagga
ggcagtgatggagaaggagccattgggcttagcagtgatcccaagagccgggaacaaatg
atcaatgatcggattggttataaaccccaacccaagcccaataatcgttcatctcaattt
ggaagtcttgaattttag

>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_4|171_aa
MRKRGKSVPVNSVKLWENDLWGLLWLMLYLLYVFQASLRTPELTWERVRSQVDHVIWPDG
KRIVLLAEALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKY
LGLNKNGPFKPNYYRCLGLPRNQGHLGSDELPALELVFASPTTYAYMNSEK

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_4|516_bp
atgagaaaaagagggaaatcagtaccagtcaactcagtgaaactgtgggagaatgatttg
tggggcttgctatggctaatgctgtacttgctgtatgtgttccaggcgagtctgcggaca
ccagaactgacctgggagcgagtgagatctcaagttgaccatgtgatatggcctgatggc
aagaggatagtactgctggcagaggctcttgccttgatagagctttacaatgctcctgag
ggtcgctataagcaggatgtctacctgttgcccaagaagatggatgagtatgtggccagc
ctacacctgcctacctttgatgcccacttgacagagctgacagatgaacaggccaagtat
ctgggactcaacaagaatgggcccttcaagcctaattactacaggtgccttgggctcccc
agaaatcagggacacctgggcagtgatgagcttcctgcactggaattggtctttgcatcc
ccaaccacatatgcttacatgaactcagaaaaatga

>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_5|549_aa
MEDPAAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRESEVRSPESFGWGPETPAGG
KRRLSPLKQKFRSQFIDGGTGAERLSDWLEGWEAGAQPQESRIGEWGNRSPPPRLPAAGP
WASRGTSARSLPVPFPPDIVLVQMFFWGDEPFINSTIIYRGLSASHCFRCQGYISEQDRV
FAHGETNFAICSPPVKSSSGKGSESTVLCFCQYFAVSRDSKAFHLHRGLPADCLQLHSSC
LEMNNCCDHLYLGSLPAKSLAGKISFPLPSAAAGLLLPASTSPITTVPRDGIVPGWVDKA
GVAALRNRSDEIKLSVLQSSSWPSPNVEGCLLCCSSQLAGRGQNCIVTLRTWNSPITGGA
LKKISRLKFPPSGAKTSRPAERNVTGTGSKNFATRSLGVMLLQDDGEHGKTMSMSPLPHF
FSHEMSALVRGNALWNTMTVDEAFHESMDGSLGRSIACRIGKPLSGKRSNTINLPPGSWL
ITLRNGALSRAQCWSLLLANWALSSGRSQVNLGEWKSMLLSPCVTSVPATVATLLMGPLD
NDRGAGERG

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_5|1650_bp
atggaggaccccgccgcgcctgggaccgggggcccgcccgcaaatggcaatggcaacggc
ggcggcaaagggaagcaggcggcgcccaagggccgcgaagcgttccgaagccagcggcgg
gagtcagaggtgaggagcccggaaagcttcggctggggcccggagacgcccgccggcggg
aagcggcggctgagccccctgaagcagaaattccgatcccagtttatagacgggggaaca
ggagcggagaggttaagtgactggcttgaggggtgggaggctggagctcagccgcaggaa
agcaggattggcgagtggggcaaccgcagtccccctcccaggctgcctgcggcgggcccc
tgggccagccgagggacttctgcccgttccctgcccgtccccttccccccagacattgtt
ctcgttcaaatgtttttttggggagatgagccattcattaattcaacaattatttatcga
ggactttctgccagccactgttttaggtgccagggatatatcagtgaacaagatagggtc
ttcgcccatggggagacaaattttgcaatctgttccccacctgtcaagtcttcttcaggc
aaaggctctgagagtacagtcctttgcttttgccagtactttgcagtgtccagagactcg
aaagctttccacctgcaccgcggtttacctgctgattgtctgcagctgcactcttcatgc
ctggaaatgaacaactgctgcgatcatctctatctgggctcattgcctgccaaaagcctg
gctggaaagattagctttcctctaccttctgctgcagcaggactccttttacctgccagt
acatcccctattaccacagtacccagagatgggatagttcctggttgggttgacaaagca
ggagttgcagccctgagaaacaggagtgatgagattaagctctctgtgctgcagtcctcc
tcttggccctcaccaaatgttgaaggctgccttctctgctgcagcagccagctggcagga
agaggacagaattgtatagttacactgagaacctggaattcaccaataacaggaggtgct
ttgaagaagatttcaagactcaagtttcctccctctggagctaaaacctctaggccagca
gaacgtaatgtcacgggaacaggaagcaaaaattttgctactagatcactaggggtgatg
ctgcttcaggatgatggggaacatggtaagaccatgagcatgagcccactgccacacttc
tttagccatgaaatgagtgccttggtcagaggcaatgctttgtggaataccatgacggtg
gatgaggcattccatgagtccatggatggtagtcttggcagaagcattgcttgcaggata
ggcaaacccttatctggaaagaggtccaatacaatcaacctgccaccaggtagctggctg
atcaccctgaggaatggtgccttatccagggctcagtgttggtctctgctgctagcaaat
tgggcactcagcagtggccgtagccaggtcaaccttggtgagtggaagtccatgttactg
agcccatgcgtaacttccgtccctgccacagtggccactttgctcatgggcccattggac
aatgacagaggtgctggggaaagaggctga

>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_6|236_aa
MSVDYRKLNQVVTPIAAAVLDVVSLLEQINTSSGTWYVVIDLASAFFSIPVHKARQKQFA
CSWLGQQYTFTVLPQRYIYSLALSHNLIRRDLDRFLLPQDITLVHYIDDIMLIGSSEQEV
ANAVDLLWGPEQEKALQQAQAVVQAALPLGPYDPADPMVLEVSAADGDAVWCLWQAPRDE
SQWRPLGFWSKALPSSADNYFTFERQLLACYWSLVETERLTMGHQVTMRPQLPIMN

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_6|711_bp
atgtcagtggattatcgtaagcttaaccaagtggtgactccaattgcagctgctgtacta
gatgtggtttcattgctcgagcaaattaacacatcttctggtacctggtacgtggtcatt
gacttggcaagtgcctttttctccattcctgtccataaggcccgccagaagcaatttgcc
tgcagctggctgggacagcaatatacctttactgtcctaccccagaggtatatctattct
ctggctttgagtcataatcttattcggagagaccttgatcgctttttgcttccacaagat
atcacattggtccattacattgatgacattatgctgattggatccagtgagcaagaagta
gcaaatgcagtggacttattgtggggtccagaacaagagaaggctctgcaacaggcccag
gctgttgtgcaagctgctctgccacttgggccatatgacccagcagatccaatggtgctt
gaggtgtcagcggcagatggggatgctgtttggtgcctttggcaggctcccagagatgaa
tcacagtggaggcctttaggattttggagcaaggccctgccatcttctgcagataactac
tttacttttgagagacagctcttggcctgttactggtctttggtggaaactgaacgtttg
actatgggtcatcaagtcaccatgcgacctcaactgcctatcatgaactga

>gi568815591r:129310116_129510370|GENSCAN_predicted_peptide_7|949_aa
MGQGGDIATTGDGETVPPGKKVQGKEWLELEEDAQKAYIMGLLDRLEVVSRERRLKVARA
VLYLAQGTFGECDSEVDVLHWSRYNCFLLYQMGTFSTFLELLHMEIDNSQACSSALRKPA
VSIADSTELRVLLSVMYLMVENIRLERETDPCGWRTARETFRTELSFSMHNEEPFALLLF
SMVTKFCSGLAPHFPIKKVLLLLWKVVMFTLGGFEHLQTLKVQKRAELGLPPLAEDSIQV
VKSMRAASPPSYTLDLGESQLAPPPSKLRGRRGSRRQLLTKQDSLDIYNERDLFKTEEPA
TEEEEESAGDGERTLDGELDLLEQDPLVPPPPSQAPLSAERVAFPKGLPWAPKVRQKDIE
HFLEMSRNKFIGFTLGQDTDTLVGLPRPIHESVKTLKQVTGVGSQSSGIGSHQSRSDYQA
PGYWVGLLYQTLSGPSAFLLQSFGQIGKIRSLFTYSVSYIQHKYISIADVQIKNEEELEK
CPMSLGEEVVPETPCEILYQGMLYSLPQYMIALLKILLAAAPTSKAKTDSINILADVLPE
EMPAFCLALFSSELWIWRVTPVPATGCPEHEAGHRCEQAQGDYCKEYLYPASATPQTLQT
QPYLPGEQLGALLHRSWVFARPYLSKEGCKVPFNPDEHLSAFSLSSLRESSHPLHELEVG
LWSGNCPRKVQMSVSLKSESSLLVEEQVLRVQRGFCRVYVHGPINQGIFPLSYIRRHLWI
QPIPAVAIYLKPVLISASYSISVLDYPCCTIQDLPELTTESLEAGDNSQFCWRNLFSCIN
LLRLLNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMLQLYVLKLLKLQTKYLGRQWRK
SNMKTMSAIYQKVRHRMNDDWAYGNDIDARPWDFQAEECTLRANIEAFNSRRYDRPQDSE
FSPVDNCLQSVLGQRLDLPEDFHYSYELWLEREINAKAFFRAKAEDPFG

>gi568815591r:129310116_129510370|GENSCAN_predicted_CDS_7|2850_bp
atgggtcagggaggagatattgccactactggggatggggaaactgttcctcctggcaaa
aaagtgcagggcaaggaatggctggagttggaagaagatgcccaaaaggcctatataatg
ggactcttggaccggctagaggtggtcagtagggaacggcggctgaaggtggcccgggct
gttctctacctggcccaaggtacttttggggaatgtgattcagaggtcgatgtgctacac
tggtccaggtacaactgcttcctgctgtatcagatggggaccttctccaccttcctggag
ctactccacatggaaattgacaacagccaggcctgtagcagtgcccttcggaaaccagct
gtctccatagctgatagcacagagctcagggtgctgctgagtgttatgtacctaatggtg
gaaaatattcgcctggagcgagagacagacccctgtgggtggagaacagcccgggagacc
ttccgcactgaattaagcttctccatgcataatgaggagccttttgcccttttactcttc
tccatggttaccaagttctgcagtggcctggctcctcacttccccataaagaaggtcctg
ctcctgctctggaaggtggtcatgtttaccctcggtggatttgagcatctgcagactctc
aaagtacagaagcgggcagaattgggcctgcctccactggctgaagacagtatccaggtg
gtgaagagcatgcgtgctgcctccccgccctcttacactcttgacctgggagagtctcag
ctggcacccccaccctccaagctgcgaggccgccgtggctctcgaaggcaactcctcact
aagcaggacagcctggacatctacaatgaaagggatctcttcaagactgaggagcccgcc
acagaggaggaagaggagtctgctggtgatggagaacgaaccttggatggagagctagac
ctgctagagcaggaccctctggtgccacctccaccctcacaggcacccctctctgctgag
cgggtggcttttcccaagggcctgccctgggccccaaaggtcagacagaaggacattgag
cacttcttggagatgagcaggaacaagttcatcggattcaccctggggcaggacacagat
acattggttggattacccaggcccatccatgagagtgtgaagaccctaaagcaggtgact
ggggtgggctctcagtcttcagggatagggagccatcaaagcaggtcagattaccaggct
cctggatactgggtggggcttttataccagactctttctggaccttctgcattcctcctg
cagtcctttggccaaataggaaaaattaggtctctctttacttactcagtttcctatatt
cagcacaagtatatctccatcgcagatgtgcagatcaagaatgaagaggagctggagaag
tgccctatgtctttgggggaagaggtggtaccagagacgccatgtgaaatcctctaccag
ggaatgctgtacagccttccgcagtatatgatcgctctgcttaagattctgctggctgca
gctcccacctctaaggctaagacagactctatcaatatcctggcagatgtcctacctgag
gagatgccggctttctgcttggctctttttagctcagaactctggatctggagggtgaca
ccagtgccagcgactggctgcccagagcatgaagctgggcatcgatgtgaacaggcacaa
ggagattattgtaaagagtatctctaccctgcttctgctactcctcaaacacttcaaact
caaccatatctaccaggtgagcagctaggagcacttctccacaggtcttgggtgtttgcc
aggccctatctctcaaaggaaggatgcaaagtcccttttaatcctgatgagcatctttca
gccttttctttgtcctctctcagggaatccagccacccattgcatgagcttgaggtaggg
ttatggagtgggaactgtcctagaaaggtgcagatgtctgtgtcccttaagtcagaatca
agcttgctggtagaagagcaggtcctcagagtacagagaggcttctgtagggtctatgtc
catggccctatcaaccagggtatttttccactttcatacattcgaagacatctttggata
cagccaattcctgctgttgccatttacctaaagcctgtccttatctctgcatcttacagc
atctcagtcctggattatccttgctgtaccatccaggatttgccggagcttactactgaa
agtctggaagctggagacaacagccagttctgctggaggaacctcttttcctgcatcaac
ctcctgaggctgctcaataaactgaccaaatggaaacattcccggaccatgatgctggta
gtgtttaaatcggcaccaatcttaaagcgggccctcaaggtcaaacaggccatgctgcaa
ctttatgtcctaaagctactaaagttacagaccaagtacctggggcgccaatggaggaaa
agcaacatgaaaaccatgtcagccatttaccagaaagtgcgtcaccgcatgaacgatgac
tgggcttacgggaatgacatcgatgccagaccatgggacttccaagcagaagaatgtacc
ttgagggccaacattgaggcttttaacagccgtcgctatgacagaccccaggactctgag
ttttcacctgtggataactgcttgcagagcgtactggggcagaggttggatctgcctgaa
gatttccactattcatatgagctctggctcgagagagagatcaatgctaaggctttcttc
cgtgcaaaggctgaagatccatttggttga