GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:16:22

Sequence gi568815591r:121250464_121479016 : 228553 bp : 37.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    192    422  231  1  0   56   82   107 0.227   3.72
 1.02 Intr +   6720   6871  152  1  2   40   48   104 0.248   0.56
 1.03 Intr +  15764  15984  221  1  2   82   82    97 0.464   4.68
 1.04 Intr +  16244  16345  102  2  0   55   84    61 0.401   0.77
 1.05 Term +  25844  26000  157  2  1   78   41    60 0.033  -3.28
 1.06 PlyA +  26017  26022    6                               1.05

 2.03 PlyA -  28535  28530    6                               1.05
 2.02 Term -  34598  34172  427  1  1   12   42   208 0.115   2.39
 2.01 Init -  42180  42035  146  0  2   78   98   150 0.596  14.64
 2.00 Prom -  46547  46508   40                              -5.15

 3.00 Prom +  65217  65256   40                              -4.45
 3.01 Init +  65445  65502   58  2  1   42  131    23 0.970   3.52
 3.02 Intr +  65633  65895  263  0  2   82  110   144 0.941  12.28
 3.03 Term +  67370  67564  195  1  0   59   40   148 0.452   3.53
 3.04 PlyA +  69989  69994    6                               1.05

 4.00 Prom +  70691  70730   40                              -4.45
 4.01 Init +  78830  78924   95  1  2   92   76   249 0.986  22.00
 4.02 Intr +  79104  79354  251  0  2   87  101   293 0.983  26.66
 4.03 Intr +  81215  81501  287  0  2   72   91   165 0.031  11.34
 4.04 Intr +  88418  88808  391  1  1   59   84   223 0.301  12.37
 4.05 Term +  96558  96685  128  1  2   68   38   123 0.493   2.76
 4.06 PlyA +  97895  97900    6                               1.05

 5.07 PlyA -  98416  98411    6                               1.05
 5.06 Term - 100087  99998   90  1  0   47   39    74 0.123  -4.86
 5.05 Intr - 100806 100680  127  2  1   80   92    37 0.189   3.06
 5.04 Intr - 109664 109580   85  0  1  119   55    76 0.653   5.36
 5.03 Intr - 112484 112434   51  0  0   93   99    30 0.718   2.56
 5.02 Intr - 113725 113667   59  0  2   96   95    33 0.747   2.41
 5.01 Init - 120892 120837   56  1  2   47   75    66 0.554   2.01
 5.00 Prom - 121338 121299   40                              -5.85

 6.00 Prom + 121520 121559   40                              -5.05
 6.01 Init + 129935 130132  198  1  0   85   79   102 0.733   7.95
 6.02 Term + 147964 148233  270  0  0   60   39   266 0.786  13.40
 6.03 PlyA + 148892 148897    6                               1.05

 7.05 PlyA - 151595 151590    6                               1.05
 7.04 Term - 170526 170339  188  1  2   37   48   167 0.451   4.27
 7.03 Intr - 171765 171460  306  1  0   43   68   187 0.099   7.70
 7.02 Intr - 179739 179644   96  1  0   20   66   124 0.048   2.46
 7.01 Init - 181412 181346   67  2  1   21  116    37 0.789   1.09
 7.00 Prom - 183824 183785   40                              -5.35

 8.00 Prom + 184102 184141   40                              -5.45
 8.01 Sngl + 188191 188565  375  0  0   71   48   219 0.948  10.14
 8.02 PlyA + 188675 188680    6                               1.05

 9.02 PlyA - 189888 189883    6                               1.05
 9.01 Sngl - 190730 190371  360  2  0   75   40   303 0.770  20.02
 9.00 Prom - 214937 214898   40                              -3.35


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  79668  79834  167  1  2   61   48   163 0.952   6.70
S.002 Term + 193019 193453  435  1  0    2   39   321 0.873  12.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_1|287_aa
XIQTTIREYYKHLYANKLENLEEMDKFLNTYTLPRLNQEEVESLNRPITGSEIEAIINSL
PTKKSPRQMDSQQNSTQANLHTYAISAIKVEVWGKKDNRRAMNQAQDPSKHVALQDRPGH
MPMKPAWVILFIGDSTNRGIMYYLIERLNETLQEWQKVHGTKFYHNVNGGKTLISYSYYP
QFWISPSLRPTFENALEHLLQRSRPLENTGQTVLVVGGVQWLNSNHLQIIHKVLKSPFTT
LNQPVTKSCLQAIYFPRLSPTLHSNCLDLVYSFTKSFNIYFVVQFLN

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_1|864_bp
naaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaat
ctagaagaaatggataaattcctcaacacatacaccctcccaagactaaaccaggaagaa
gttgaatctctgaatagaccaataacaggatctgaaattgaggcaataattaatagctta
ccaaccaaaaaaagtccaagacagatggattcacagcaaaattctacccaagcaaacctg
cacacatacgccatatctgcaataaaagttgaagtttggggaaaaaaagacaatagaaga
gcaatgaaccaagcacaagacccttcaaagcatgtggccctgcaagaccgtccaggtcac
atgcccatgaagccagcttgggtgattctgttcattggagattcaaccaacagagggatc
atgtactatcttattgaaaggctgaatgaaacgttgcaggaatggcagaaagtacatggc
actaaattctatcacaacgtcaatggtgggaagactttgatcagttattcctactatccc
cagttctggataagcccttcattgagaccaacatttgaaaatgcacttgaacacctcttg
caaagatcacgtcccctagagaatactggccagactgtattggttgttggtggtgttcag
tggcttaattccaatcacctgcaaattattcacaaagttttgaagagccctttcacgacc
cttaaccagccagttaccaaatcctgtttacaagctatatattttccacgtctttctcct
acactacattccaactgccttgaccttgtttattcttttactaaatcattcaacatttat
tttgtggtccagttcttgaactaa

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_2|190_aa
MRKSQHKKAENSKNQNASSPPNDRNSSPAREQNWMENQFDKLTEVGFRRFQRMYGNAWMS
RQKFAAGAETSWRSSARTVQKGNVGSEPPHSDPTGALLNEAVRRRALSSKPQNGRSTNSL
HCVPGKATDTQRHPVKAAGREAVPCKATGELPKAGGDHLLHQHDLDVRPSVKGDHFVTLR
FNDCPAGFWV

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_2|573_bp
atgaggaaaagccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaacgatcgcaactcctcgccagcaagggaacaaaactggatggagaatcagtttgac
aaattgacagaagtaggcttcagaagatttcagaggatgtatggaaacgcctggatgtcc
aggcagaagtttgctgcaggggcggaaacttcatggagaagctctgctaggacagtgcag
aagggaaatgtggggtcagagcccccacacagtgaccccactggggcactgctgaatgaa
gctgtgagaagaagggcactgtcctccaaaccccagaatggtagatccaccaacagcttg
cactgtgtgcctggaaaagccacagacactcaacgccatcctgtaaaagcagctgggagg
gaggctgtaccctgcaaagccacaggggagctgcccaaggctgggggagaccacctcttg
catcagcatgacttggatgtgagacctagtgtcaaaggagatcattttgtaactttaagg
tttaatgattgccccgctggattttgggtttga

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_3|171_aa
MTSGPQTDQPKKHLTNFKSETKETRFICGPKTPAPVTDWEGSLLLVFNHCRDTSLIIHPR
FKGVRPRRDACLSPSPLAASPAFLGKGQVPQPLLSLSLPLPCFSGDRELATSARNLSDHQ
AKECLQPRIPPKPCPIFAGPHWKSDCSTHLADTPRAPGTLAQGFLTDSFSA

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_3|516_bp
atgacctcaggtcctcagaccgaccagcccaagaaacatctcaccaatttcaaatccgag
acaaaagagacacgttttatctgtggacccaaaactccggcaccggtcacggactgggaa
ggcagccttctcttggtgtttaatcattgcagggacacctctctgattatacacccacgt
ttcaagggtgtcagaccacgcagggacgcctgcctcagtccttcacccttagcggcaagt
cccgcttttctggggaaggggcaagtaccccaaccccttctctccttgtctctacccctt
ccctgcttttccggggacagggagcttgctacaagtgccagaaatctatctgaccaccag
gccaaggaatgcctgcagcccaggattcctcctaagccgtgtcccatctttgcgggaccc
cactggaaatcggactgttcaactcacctggcagacactcccagagcccctggaactctg
gcccaaggctttctgaccgactccttctcggcttag

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_4|383_aa
MDRAALLGLARLCALWAALLVLFPYGAQGNWMWLGIASFGVPEKLGCANLPLNSRQKELC
KRKPYLLPSIREGARLGIQECGSQFRHERWNCMITAAATTAPMGASPLFGYELSSGTKET
AFIYAVMAAGLVHSVTRSCSAGNMTECSCDTTLQNGGSASEGWHWGGCSDDVQYGMWFSR
KFLDFPIGNTTGKENKVLLAMNLHNNEAGRQAVAKLMSVDCRCHGVSGSCAVKTCWKTMS
SFEKIGHLLKDKYENSIQISDKTKRKMRRREKDQRKIPIHKDDLLYVNKSPNYCVEDKKL
GIPGTQGRECNRTSEGADGCNLLCCGRGYNTHVVRHVERCECFSDPFLFGYQVKEIWADY
TEHYELAGYKSIFPDQREYLLSI

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_4|1152_bp
atggacagggcggcgctcctgggactggcccgcttgtgcgcgctgtgggcagccctgctc
gtgctgttcccctacggagcccaaggaaactggatgtggttgggcattgcctccttcggg
gttccagagaagctgggctgcgccaatttgccgctgaacagccgccagaaggagctgtgc
aagaggaaaccgtacctgctgccgagcatccgagagggcgcccggctgggcattcaggag
tgcgggagccagttcagacacgagagatggaactgcatgatcaccgccgccgccactacc
gccccgatgggcgccagccccctctttggctacgagctgagcagcggcaccaaagagaca
gcatttatttatgctgtgatggctgcaggcctggtgcattctgtgaccaggtcatgcagt
gcaggcaacatgacagagtgttcctgtgacaccaccttgcagaacggcggctcagcaagt
gaaggctggcactgggggggctgctccgatgatgtccagtatggcatgtggttcagcaga
aagttcctagatttccccatcggaaacaccacgggcaaagaaaacaaagtactattagca
atgaacctacataacaatgaagctggaaggcaggctgtcgccaagttgatgtcagtagac
tgccgctgccacggagtttccggctcctgtgctgtgaaaacatgctggaaaaccatgtct
tcttttgaaaagattggccatttgttgaaggataaatatgaaaacagtatccagatatca
gacaaaacaaagaggaaaatgcgcaggagagaaaaagatcagaggaaaataccaatccat
aaggatgatctgctctatgttaataagtctcccaactactgtgtagaagataagaaactg
ggaatcccagggacacaaggcagagaatgcaaccgtacatcagagggtgcagatggctgc
aacctcctctgctgtggccgaggttacaacacccatgtggtcaggcacgtggagaggtgt
gagtgtttttcagacccttttctctttggctatcaagtgaaggaaatatgggctgactat
acggaacattacgagcttgcaggttataagtcaattttccctgaccaaagggagtatctt
ttatcaatttag

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_5|155_aa
MASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTKYFDMWGGDVAPF
IEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRDNWVFCGGKGIKT
KSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_5|468_bp
atggcaagtggagcagccaacgtggtgggacccaaaatctgcctggaagataatgtttta
atgagtggtgttaagaataatgttggaagagggatcaatgttgccttggcaaatggaaaa
acaggagaagtattagacactaaatattttgacatgtggggaggagatgtggcaccattt
attgagtttctgaaggccatacaagatggaacaatagttttaatgggaacatacgatgat
ggagcaaccaaactcaatgatgaggcacggcggctcattgctgatttggggagcacatct
attactaatcttggttttagagacaactgggtcttctgtggtgggaagggcattaagaca
aaaagcccttttgaacagcacataaagaacaataaggatacaaacaaatatgaaggatgg
cctgaagttgtagaaatggaaggatgcatcccccagaagcaagactaa

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_6|155_aa
MDEAGGHYTKQTNTGTENQIVHVLIHKQKLNTEKGTYKHKEGKNRLWGLLEGGGWEENED
QKTTYQHKQQKRGLNMDDVEKGKKICIQKCAQCHTVEKAGKHRTGPNLHGLFGWKTGQAV
GLFYTDAIKNKGITWGEDTLMEYLENPKKHISGTK

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_6|468_bp
atggatgaagctggaggccattacactaagcaaactaacacaggaacagaaaaccaaata
gtgcatgttctcattcataagcaaaagctaaacactgagaagggaacatataaacataaa
gaagggaaaaacagactctggggcctacttgagggtggagggtgggaagagaatgaggat
caaaaaactacctatcagcacaagcaacaaaagagaggattaaatatggatgatgttgag
aaaggcaagaagatttgtattcagaagtgtgcccagtgccacactgtggaaaaggcaggc
aagcacaggactgggcctaatctccatggtctcttcggatggaagacaggtcaagccgtt
ggattattttacacagatgccattaagaacaaaggcatcacctggggagaggatacactg
atggagtatttggagaatcccaagaagcacatctctggaacaaagtga

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_7|218_aa
MCACWLEYPEKQRERETLVLQQDQGPILKREEEEEEEEERRKKKEQRRKKKYNNARHKGS
PSPHQSQEPSWLHPVDPALGPQVELPASPAPCTHTPQPLGGRWDWAPWSRGRCLSGRLRP
HRSPRKRGGSGMAGCSSQALPHGEAAKGRQEIERSAAQLRTEVLKRDTTTTLKASSKFFN
GPIFDISYTKCHQAPEESTRRKSEIQANTNKEGDSAKA

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_7|657_bp
atgtgtgcatgctggttggaatacccagagaaacagagagagagagagacactggtattg
caacaagaccaaggcccaatcttgaaaagagaagaagaagaggaagaggaagaagaaaga
agaaagaagaaagaacaaagaagaaagaagaaatacaataatgctagacataaaggttct
ccaagtcctcaccagagtcaggagcccagctggcttcacccagtggatcccgcactgggg
ccacaggtggagctgcctgccagtcccgcgccatgcacccacactcctcagcccttgggt
ggtcgatgggactgggcaccgtggagcagggggcggtgcttgtccgggaggctcaggcca
caccggagcccacggaagcggggaggctcaggcatggctggctgcagttcccaagccctg
ccccatggggaggcagctaagggccggcaagaaattgagcgcagcgccgctcaacttaga
acagaagtacttaaacgggacactacaactacacttaaagcttccagtaagtttttcaat
ggtcccatctttgacataagctacaccaagtgtcaccaggcacctgaggagagcactaga
agaaagtcagaaatccaagcaaatacaaacaaagaaggggacagtgcaaaagcatga

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_8|124_aa
MAGAPPPPSLPPCSSISVCCASNERGFVGVGPMPSLTSPIQHSVGSSGQGNQAGERNKDI
QLGKEEVKLSLFADDMIVYLENPIVSVQNLLKLISNLGKVSGYTINVEKSQAFLYTNNRQ
RAKS

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_8|375_bp
atggcaggcgcccctcccccaccctcgctgccgccttgcagttccatctcagtctgctgt
gctagcaatgagcgaggcttcgtgggtgtgggacccatgccctctctgacctctcctatt
caacatagtgttggaagttctggccagggcaatcaggcaggagaaagaaataaagatatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatattta
gaaaaccccatcgtttcagtccaaaatctccttaagctgataagcaacttaggcaaagtc
tcaggatacacaatcaatgtggaaaaatcacaagcattcttatacaccaataacagacag
agagccaaatcatga

>gi568815591r:121250464_121479016|GENSCAN_predicted_peptide_9|119_aa
MKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIFRVGGKNLTFDQLALD
SPKVCGTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRKFEYARGQGASQGYKN

>gi568815591r:121250464_121479016|GENSCAN_predicted_CDS_9|360_bp
atgaagcttcctggccaggaaaacaaaacggccgtggttgtgggaaccataacagatgac
gtgtgggttcaggaggtgcccaaactgaaggtgtgtgcactgggcgtgaccagccgggcc
cgcagccacatcttcagggtggggggcaagaacctcactttcgaccagctggccctggac
tcccccaaggtctgcggcaccgtcctgctctcaggtcctcgcaagggtcgagaggtgtac
tggcatttcgacaaggccctgggaaccccacacagccacaccaaaccctacgtccgctcc
aagggccggaagttcgagtatgccagaggccaaggggccagccaaggctacaaaaactaa