GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:09:16

Sequence gi568815591r:112667200_112884825 : 217626 bp : 37.20% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    249    244    6                               1.05
 1.01 Sngl -  20049  19537  513  0  0   60   42   330 0.999  21.39
 1.00 Prom -  20561  20522   40                              -6.15

 2.03 PlyA -  20849  20844    6                               1.05
 2.02 Term -  21596  21059  538  1  1    1   48   254 0.631   5.43
 2.01 Init -  22095  21875  221  0  2   68   72   186 0.406  13.15
 2.00 Prom -  29315  29276   40                              -4.65

 3.00 Prom +  36235  36274   40                              -2.85
 3.01 Init +  40579  40662   84  0  0   36  106    61 0.351   3.57
 3.02 Intr +  41203  41430  228  0  0  -28   77   182 0.157   2.64
 3.03 Term +  45535  45663  129  0  0   21   40   150 0.300   0.70
 3.04 PlyA +  45704  45709    6                               1.05

 4.00 Prom +  47332  47371   40                              -3.95
 4.01 Init +  48394  48454   61  0  1   88  116    45 0.698   8.76
 4.02 Term +  48824  48990  167  0  2   44   54    86 0.634  -2.10
 4.03 PlyA +  49522  49527    6                               1.05

 5.02 PlyA -  50315  50310    6                               1.05
 5.01 Sngl -  51506  50694  813  2  0   43   37   252 0.878  11.12
 5.00 Prom -  64476  64437   40                              -2.75

 6.03 PlyA -  65241  65236    6                               1.05
 6.02 Term -  65990  65740  251  0  2   52   48   144 0.472   1.68
 6.01 Init -  68128  68062   67  1  1  123   75    34 0.433   6.89
 6.00 Prom -  69600  69561   40                              -3.95

 7.05 PlyA -  70365  70360    6                               1.05
 7.04 Term -  85664  85567   98  0  2   62   37   127 0.418   2.15
 7.03 Intr - 100545 100243  303  1  0  116   66   225 0.049  18.74
 7.02 Intr - 105856 105582  275  0  2   82   97   110 0.935   7.56
 7.01 Init - 108065 107977   89  2  2   64   92    50 0.486   3.17
 7.00 Prom - 111214 111175   40                              -5.65

 8.00 Prom + 114812 114851   40                              -2.85
 8.01 Init + 116700 116799  100  2  1   28   75    78 0.326   0.97
 8.02 Intr + 122673 122841  169  1  1   97   68   145 0.983  11.48
 8.03 Intr + 123005 123216  212  2  2  -30    0   208 0.520  -2.17
 8.04 Intr + 123294 123481  188  1  2   56    5   146 0.054   1.59
 8.05 Intr + 134234 134496  263  1  2   43   59   202 0.567   8.16
 8.06 Term + 135387 135579  193  0  1   39   43   162 0.053   2.71
 8.07 PlyA + 136095 136100    6                               1.05

 9.04 PlyA - 137085 137080    6                               1.05
 9.03 Term - 155174 154545  630  2  0  104   34   334 0.984  22.93
 9.02 Intr - 165476 165362  115  1  1   71   69   124 0.963   8.33
 9.01 Init - 170727 170633   95  0  2   63   95    25 0.667   0.60
 9.00 Prom - 193126 193087   40                              -3.65

10.02 PlyA - 194376 194371    6                               1.05
10.01 Sngl - 202176 201724  453  0  0   47   46   318 0.908  19.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100545  99998  548  1  2  116   28   288 0.942  19.05
S.002 Sngl - 217574 217236  339  2  0   48   32   190 0.874   5.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_1|170_aa
MCQKHWDTAKAVFSRKFIALNAHRNKRERSKIDTLTPQLKEQEKQEQTNSKASRKQEITK
IRAELKEIETRKTLQKISEFRSWFFEKIKKMDRPPARLMKKKKKKNQMDTVKNDKGDSTT
DATEIQTTIREYYKYLYANKLENLEEMDKFLDTYILPRLNQEKVKSLIDQ

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_1|513_bp
atgtgccagaaacactgggacacagctaaagcagtatttagcaggaaatttatagcacta
aatgcccacaggaataagcgggaaagatctaaaattgacaccctaacaccacaattgaaa
gaacaagagaagcaagagcaaacaaattcaaaagctagcagaaaacaagaaataaccaag
atcagagcagaactgaaagagatagagacacgaaaaacccttcaaaaaatcagtgaattc
agaagctggttttttgagaagattaagaaaatggatagaccaccagccagattaatgaag
aagaaaaaaaagaagaatcaaatggacacggtaaaaaatgacaaaggggatagcaccact
gatgccacagaaatacaaactaccatcagagaatactataaatacctctatgcaaataaa
ctagaaaatcttgaagaaatggataaattcctggacacatacatcctcccaagactaaac
caggaaaaagtcaaatccctgatagaccaataa

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_2|252_aa
MRKNQRKKDENSKNREASSPPKDHSSLPAREQNWTENEFDELAEVGFRRWVINSSELKEH
VLTQCKEAKNLEQSDRENGTKLENTLQDIIQENFPHLVRQVNIQIQETQRTPQRHSSRRG
TPRHRIIRFTKVEMNEKMLRAAREKGWVTHKGKSIRLTADFSAETLQARREWRPIFNILK
EKTFQPRISHPAKLSFISEGEIKSFTDKQMLTDFAITRPALQELLKEALDVKRKSQYQPL
QKHTKLESPSTL

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_2|759_bp
atgaggaaaaaccagcgcaaaaaggatgaaaattccaaaaaccgggaggcttcttctcct
ccgaaggatcacagttccttaccagcaagggaacaaaactggacggagaatgagtttgat
gaattggcagaagtaggcttcagaagatgggtaataaactcttctgagctaaaggagcat
gttctaacccaatgcaaggaagctaagaaccttgaacaaagtgacagggagaatggaacc
aagttggaaaacactcttcaggatattatccaggagaatttcccccacctggtgagacaa
gtcaacattcaaattcaggaaacacagagaacaccacaaagacactcctcgagaagagga
accccaagacacagaatcatcagattcaccaaagttgaaatgaatgaaaaaatgttaagg
gcagccagagagaaaggttgggttacccacaaagggaagtccatcagactaacagcggat
ttctcagcagaaaccttacaagccagaagagagtggcggccaatattcaacattcttaaa
gaaaagacttttcaacccagaatttcacatccagccaaactaagcttcataagtgaagga
gaaataaaatcctttacagataagcaaatgctgacagattttgccatcaccaggcctgcc
ttacaagagctcctgaaggaagcactagatgtgaaaaggaaaagccagtaccagccactg
caaaaacataccaagttggaaagcccatcaacactatga

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_3|146_aa
MALELHAENFIMKPENHRSINTAAYAYKVNHSGNLVAHKGQRSIQEAQKAHCWLIGGISA
FGIPQHKKISDEIENEPGKTLVLGLEYKDSATGTGAISRTSRHEPHGDISDCIEVVLVLK
QRPCFAVGKLAGLRWSYGTEFAVSVV

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_3|441_bp
atggctcttgaattgcatgctgaaaacttcataatgaaaccagaaaatcacagaagcata
aacacagctgcttatgcctataaagtgaaccattcagggaatcttgtagcacacaaaggt
cagaggtcaattcaggaagctcagaaggcccactgctggctcattggtggaatttcagcc
tttgggattccacaacacaaaaagatcagtgatgaaattgaaaacgaaccaggaaagacc
cttgtgctgggactggagtacaaagattctgctactggaactggggccatttccaggaca
tccagacatgagcctcacggggatatttcagattgcattgaagtggtcctggtgctaaag
cagaggccatgctttgctgtgggaaagctggctggacttcggtggtcctatgggacagag
ttcgctgtttcagtggtgtag

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_4|75_aa
MEDHKGEKGAGEAACDHVRKAMIPTLIIANADKQELCLSAAKAAIAAKMNLACYMPETIL
TAFQTLIHLILTTVL

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_4|228_bp
atggaggatcataagggtgagaaaggagctggagaagcagcatgtgaccatgtcaggaaa
gccatgatccccactctgatcatcgcaaatgcagataagcaggaattatgtttgtcagca
gcaaaagcagcaatagcagccaaaatgaatttggcttgctatatgccagagactattctg
acagcatttcaaacattaattcatttaattctcaccacagtcttatga

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_5|270_aa
MNIHAKILNEILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSLNIIQSINRTKDKNHM
IISIDAEKAFDKIQQLFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEASPLKT
GSRQGCPLSPILFNIVLEVLTRAIRQEKERKGIQLGKEEVKLSLFADDMIVNLENPIVSA
QSLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTNASKRIKYLGIQLTR
HVKDLFKENYKPLLNEIKEDTNKWKNIPCS

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_5|813_bp
atgaacatccatgcaaaaattctcaatgaaatattggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcactaaatataatccagtctataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaactcttcatgctaaaa
actctcaataaattaggtattgatgggacatatctcaaaataataagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcatcccctttgaaaact
ggctcaagacagggatgccctctctcaccaatcctattcaacatagtgctggaagttcta
accagggcaatcaggcaggagaaagaaagaaagggtattcaattaggaaaagaggaagtc
aaattgtctctgtttgcagatgatatgattgtaaatctagaaaaccccatcgtctcagcc
caaagtctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaaatgcttcaaagagaataaaatacctaggaatccaacttacaagg
catgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatag

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_6|105_aa
MECYCREMLAHSGGKKPMLMVEVLEVLAKTIRQEKEIKGIQIGKEEVKLSLFADDMIVYL
EKPIVSASNLLKLKSNFSKVSGYKINVQNHKHSYTSITDKQRAKS

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_6|318_bp
atggagtgctattgcagggagatgctggcccacagtggaggcaagaagcccatgctcatg
gttgaagtattggaagttctagccaagacaatcaggcaagagaaagaaataaagggtatt
caaataggaaaagaggaagtcaaattgtctctgtttgcagatgacatgattgtataccta
gaaaaacccatcgtctcagcctcaaatctccttaagctgaaaagcaacttcagcaaagtc
tcaggatacaaaattaatgtgcaaaatcacaagcattcttatacatcaataacagacaaa
cagagagccaaatcatga

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_7|254_aa
MAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRF
FAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYILYYSGHTHGTGEWAL
AGGDTLRLDTLIEWWREKNGSFCSRLIIVLDSENSTPWVKEVRKINDQYIAVQGAELIKT
VDIEEADPPQLGDFTKDWVEYNCNSSNNICWTEKGRTVKAVYDIANKETPPYDTVRSCET
YTLSQEQHGKELPS

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_7|765_bp
atggctcatgggctcttccatgaattgggtaactgtttaggaggaacatctgttggatat
gctattgtgattcccaccaacttctgcagtcctgatggtcagccaacactgcttccccca
gaacatgtacaggagttaaatttgaggtctactggcatgctcaatgctatccaaagattt
tttgcatatcatatgattgagacctatggatgtgactattccacaagtggactgtcattt
gatactctgcattccaaactaaaagctttcctcgaacttcggacagtggatggacccaga
catgatacgtatattttgtattacagtgggcacacccatggtacaggagagtgggctcta
gcaggtggagatacactacgccttgacacacttatagaatggtggagagaaaagaatggt
tccttttgttcccggcttattatcgtattagacagcgaaaattcaaccccttgggtgaaa
gaagtgaggaaaattaatgaccagtatattgcagtgcaaggagcagagttgataaaaaca
gtagatattgaagaagctgacccgccacagctaggtgactttacaaaagactgggtagaa
tataactgcaactccagtaataacatctgctggactgaaaagggacgcacagtgaaagca
gtatatgatattgccaacaaggaaactcccccttatgataccgtcagatcttgtgagact
tatacgctatcacaagaacagcatggaaaagagctgccctcatga

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_8|374_aa
MTNHPENSKNGKARYYKIPEVSVSKFECGKNKKSRCGRSDKELGCSPPSSASENATTTWR
PVEGEPLRNTERRSHTLQSPTTTVNSSRGSQFQNQTKKEESRQGFSLRLRTGRRHALGNE
GPRPYALIQASVGVNFLRYRPGRDRHVSAAEIRDGTERRRGEQGAARVSTAPPKAPAFLK
PKSTPGTWNQQLRTDSGKTTKDQADSAHQASRPPPRAGPNGDRALPPWSGKTKASGTGLP
FPRPHNDVLPSGQVLWQGQSQVILSLRMGQRSIVPYLVHLDPESGITFLHRKDIGTGDEN
AMFIQGADNCWPVSSQILSVDSWMAAAVHVQGLPHSKLSVYQIWSRIGPCPSCTKEEICG
GSAASFKDCLSDVT

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_8|1125_bp
atgacaaatcatccagaaaattccaaaaatggaaaagccaggtattacaaaataccagag
gtgagtgtctctaagtttgaatgcggaaagaataaaaaatcgagatgtgggaggtccgac
aaggagcttggctgttctccaccatcctctgcctcggagaacgcgaccacaacgtggcgc
ccagttgagggggaacccttgcgaaatacggagaggcgctcccacaccctccaatctcca
accaccactgtcaactcctccagaggcagtcagttccaaaaccaaaccaaaaaggaggag
agcagacaaggcttcagcctgcgactgagaacagggaggcggcacgccttggggaacgag
ggcccgaggccatacgcgctaatacaggccagtgtcggcgtaaactttctccgttaccgg
cccggccgcgaccgccatgtttccgccgccgaaatccgcgacggtacggaacgccgccgg
ggtgagcaaggcgctgcgcgagtgtcaactgccccacctaaggcgcctgccttcctcaag
ccaaagtcgactcctgggacctggaatcagcagctgagaacagacagcgggaagaccacc
aaagatcaggctgacagtgcccatcaagcatctaggccaccgcctcgggctggaccgaac
ggggacagggcccttcccccatggagtggaaaaaccaaagcatcggggactggcttgcca
tttccaagaccacataatgatgtgctccccagtggacaggtcctgtggcaaggacaatca
caggttatcttgagtctcaggatgggacaaaggagtatcgtcccttaccttgtccacctg
gatcctgagagtggtatcacgttcttgcatcggaaggacataggcactggtgatgagaac
gccatgttcattcagggtgcagacaactgctggcctgtatcaagccagatcctgtcagtg
gacagctggatggctgcagctgtccatgtgcaaggattgcctcatagcaagctctctgtg
taccagatctggtcaagaattgggccctgtccctcctgtacaaaggaggaaatctgtgga
ggttcagcggcctctttcaaagactgtctttcagatgttacatag

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_9|279_aa
MSYSAVGHEFNVNASTIRIKYSAFKQKHINSRLLQASGKIRLLDVGSCFNPFLKFEEFLT
VGIDIVPAVESVYKCDFLNLQLQQPLQLAQDAIDAFLKQLKNPIDSLPGELFHVVVFSLL
LSYFPSPYQRWICCKKAHELLVLNGLLLIITPDSSHQNRHAMMMKSWKIAIESLGFKRFK
YSKFSHMHLMAFRKISLKTTSDLVSRNYPGMLYIPQDFNSIEDEEYSNPSCYVRSDIEDE
QLAYGFTELPDAPYDSDSGESQASSIPFYELEDPILLLS

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_9|840_bp
atgagttatagtgctgttggccacgagttcaatgttaatgcatcaacaatacgtattaaa
tacagtgcttttaaacagaaacatataaattcaaggttgctacaagcctcaggaaaaatc
agattacttgatgttggcagctgctttaacccatttctgaagtttgaagaatttctaact
gttggcatagatattgtacctgctgtagagagtgtctataaatgtgatttcctgaactta
cagcttcagcaaccactccagcttgcacaggatgctatagatgcttttttgaagcagctg
aaaaaccctattgattctcttcctggagagcttttccatgtggttgttttctctctcctt
ctttcttattttccatctccttaccagcgatggatttgctgcaagaaagcccatgaactg
ttagtgttaaatggtttattactaatcatcacacctgattcctcccatcagaaccgtcat
gctatgatgatgaaaagctggaagattgctatagagtccctgggctttaaacgcttcaag
tactcaaaattttcacatatgcatctgatggcatttaggaaaatctctctaaaaaccaca
agtgacttggttagtaggaactacccaggaatgttatatattcctcaagatttcaacagt
atagaagatgaggaatattctaacccttcctgctatgttcgatcagatatagaagatgaa
caactagcatatggtttcacagaactccctgatgcgccatatgactcagattctggagaa
agtcaagccagctctattcctttctatgagctagaagaccccatattacttttaagttaa

>gi568815591r:112667200_112884825|GENSCAN_predicted_peptide_10|150_aa
MALMSKSQQEATEAKEASLSRQCHWSSAGVELLERPAQHLSQPTRSGPQHVELLPHSSQC
TNERGWGREITPTLRIHSLALLLPPSVACASLLFPLTQGRLWQATFLLLLGQSTLKVKSP
GDWRLLPSLSLDWWATVPQPTKEAARDTQQ

>gi568815591r:112667200_112884825|GENSCAN_predicted_CDS_10|453_bp
atggcgcttatgagtaagagccagcaggaggcgacagaggcaaaagaagcatccttatcc
cgccagtgccactggtcttcagcgggagtggagctgctggagaggcctgcacagcacctc
tctcagcccacacgctctggtccccagcatgtagagctgctgccgcattcgtcccagtgc
actaatgagcggggctgggggcgagagattacccccactctccgaattcattccttggct
ttgctgttgcccccttcagtggcttgtgcttcacttttgtttcctttgacccaaggaagg
ctttggcaggccacgttcctccttctgttggggcagtccacactgaaggttaaatctcca
ggggactggagactgcttccctccctgtctttggactggtgggctactgtcccgcaacca
accaaggaagcagcccgggacacccagcagtga