GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:03:20

Sequence gi568815591f:5780890_5983999 : 203110 bp : 47.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +     73    816  744  0  0   41   49   274 0.541  12.26
 1.02 PlyA +   1303   1308    6                               1.05

 2.04 PlyA -   3561   3556    6                               1.05
 2.03 Term -  12977  12841  137  0  2   65   41    79 0.135  -0.92
 2.02 Intr -  30268  30209   60  2  0   52   72    76 0.095   1.11
 2.01 Init -  39829  39772   58  1  1   93   74    13 0.348   1.91
 2.00 Prom -  40763  40724   40                              -2.46

 3.00 Prom +  40857  40896   40                              -5.86
 3.01 Init +  42227  42637  411  1  0  102   99   191 0.631  16.14
 3.02 Intr +  52638  52679   42  2  0  111  109    21 0.042   4.94
 3.03 Intr +  59060  59214  155  1  2   66   -2   267 0.420  14.37
 3.04 Intr +  59801  59967  167  2  2  107   99    35 0.516   6.10
 3.05 Term +  66191  66747  557  0  2   47   46   357 0.293  21.89
 3.06 PlyA +  70074  70079    6                               1.05

 4.00 Prom +  98971  99010   40                              -3.86
 4.01 Init + 100001 100061   61  1  1   49   65   113 0.935   6.52
 4.02 Intr + 101604 101736  133  1  1   65   71   215 0.849  17.20
 4.03 Intr + 103001 103110  110  2  2   76   75   137 0.536  11.13
 4.04 Term + 105175 105200   26  2  2  130   42     2 0.367  -1.81
 4.05 PlyA + 105453 105458    6                               1.05

 5.00 Prom + 105704 105743   40                              -7.16
 5.01 Init + 117911 118030  120  1  0   89   85   173 0.999  15.55
 5.02 Intr + 119966 120043   78  1  0   57   23   106 0.625   0.75
 5.03 Intr + 120768 120815   48  2  0  128  121    82 0.997  14.38
 5.04 Intr + 121772 121855   84  1  0   56  114    70 0.986   6.42
 5.05 Intr + 124205 124380  176  1  2   99   82    41 0.637   3.34
 5.06 Intr + 129146 129227   82  2  1  109   64   -12 0.032  -1.86
 5.07 Intr + 137978 138015   38  1  2  123   67    49 0.340   3.36
 5.08 Intr + 138874 139077  204  1  0   80   13   106 0.341   0.62
 5.09 Intr + 142498 142656  159  1  0   70   60   188 0.884  13.30
 5.10 Intr + 142946 143073  128  2  2   58  115   180 0.987  18.02
 5.11 Term + 144743 144798   56  0  2  101   49    67 0.966   1.82
 5.12 PlyA + 145061 145066    6                               1.05

 6.23 PlyA - 145279 145274    6                              -1.75
 6.22 Term - 145659 145479  181  2  1   86   44   268 0.995  19.28
 6.21 Intr - 147503 147307  197  2  2   -5   88   268 0.326  15.71
 6.20 Intr - 154259 154131  129  2  0   95   68    54 0.542   4.99
 6.19 Intr - 157012 156869  144  1  0   93   92    -4 0.366   0.98
 6.18 Intr - 157940 157833  108  2  0   87   68    52 0.338   3.58
 6.17 Intr - 162583 162435  149  2  2   89   25    37 0.361  -2.55
 6.16 Intr - 163101 163022   80  2  2   35   94    51 0.549  -0.41
 6.15 Intr - 164289 164175  115  1  1   60  100    45 0.604   2.41
 6.14 Intr - 167520 167331  190  0  1  139   89   -15 0.899   2.86
 6.13 Intr - 170527 170406  122  2  2   47   98   118 0.998   8.91
 6.12 Intr - 172330 172186  145  1  1   92   74    99 0.999   8.76
 6.11 Intr - 175292 175116  177  2  0   85  101    61 0.856   7.22
 6.10 Intr - 177138 177018  121  2  1   83  101    50 0.858   6.30
 6.09 Intr - 178189 178104   86  1  2   69   78    19 0.749  -2.38
 6.08 Intr - 179975 179802  174  2  0   80   86   306 0.706  29.74
 6.07 Intr - 184823 184748   76  1  1  103   86    76 0.863   8.42
 6.06 Intr - 186148 185974  175  2  1   62   55   173 0.612  10.40
 6.05 Intr - 189900 189729  172  0  1   78   83    93 0.830   7.32
 6.04 Intr - 196868 196699  170  0  2   57  123   197 0.949  19.77
 6.03 Intr - 197807 197707  101  1  2  105  115    61 0.999  10.25
 6.02 Intr - 199122 199018  105  2  0   66   46    99 0.850   2.83
 6.01 Intr - 202102 201935  168  0  0   77   75   205 0.858  17.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:5780890_5983999|GENSCAN_predicted_peptide_1|247_aa
RPDTRAGPAPSAPQKGLTHLRRPRECRVTVANFRGTRAPDVREEEEKRRPPGLGFTGTAR
LPPLLQAALGCTDTASAAASGPGEGSAVSRAVALAQQTRGAGPRNFAKWREGATRPLSAF
VAPASPPHRARDAQPSPLARSRPGLGPRPSARRPSRPAPPPPPPELHRGAPQRGRVASQT
RPGARARPAADTHSSLKSPASQAGSAAFATAPLTPQKPQLRAPWQPLHSFRPCRGVTSRL
RTAPPPD

>gi568815591f:5780890_5983999|GENSCAN_predicted_CDS_1|744_bp
cgcccggacacccgagccgggccagcccccagcgccccgcagaagggtttgacgcacttg
cggcgccctcgcgagtgccgggtgacagtcgccaactttcgcggaacacgcgctccagat
gtgagggaagaggaggaaaaacgccgcccgcctgggctggggttcacaggcacggcccgc
ctcccgccgctcctccaggccgcgctcgggtgcacggacaccgcctccgcggcggcctcg
ggcccgggggagggaagcgcggtctcccgggctgttgccctcgcgcagcagacccgaggg
gccggcccgcgaaacttcgcgaagtggcgagagggggccacccggccgctcagcgccttt
gtcgctccagcctcgccaccgcaccgggctcgagacgcccagcccagccccttggcccga
tcccgcccgggcctcggcccgcgcccctcagctcggcggccctcacggcccgcgcccccg
cccccacccccggagctccacagaggcgcccctcagagaggccgcgtcgcctcacagacc
cgcccaggagctcgagcgcgccccgcagccgacactcactcgtcactcaagtcgccggct
agccaggcaggttcggcggccttcgctaccgcgccgcttactcctcagaagccgcagctg
cgagctccgtggcagccgctgcactccttccggccctgccgcggcgtcacctcgcgcctg
cgcacagcgccccctcccgactaa

>gi568815591f:5780890_5983999|GENSCAN_predicted_peptide_2|84_aa
MTVSFLRPPQPRFLYRLQNYLTLSLSMAKIYGKASPDQEALGRSMGSGAEEQGTALVGEA
QAAQEPTVPVGRHCWGSRHTLLSC

>gi568815591f:5780890_5983999|GENSCAN_predicted_CDS_2|255_bp
atgactgtcagtttcctgaggcctccccagccacgcttcctgtacaggctgcagaactac
ctcacgctcagtttatccatggctaaaatctatggcaaagccagccctgatcaagaggcc
cttgggcggtcaatgggatccggcgccgaggagcaggggacggcactcgtcggggaggct
caggctgcgcaggagcccacagtgccggtgggccggcactgctggggttcccggcacacc
ctccttagctgctag

>gi568815591f:5780890_5983999|GENSCAN_predicted_peptide_3|443_aa
MASWGVLGVVVPGGAAFTQCFEVQDCNARTSGPQTLPTATDTSDTRCGGRRSGSGAVPSA
SVAGTHLLQSRHCTGVLGGGSSRRLCGLSGAAELGWGTLQVVGPEQRLAPHLTALPRTPP
SSGSLCRAPATVTTWTQIPAFPQQQGRTMAQGSLSFGDVAVGFTRKEWQQLDLEQRTLYQ
DVMLENYSHLLSVGEEDFPVVLGLNCLLAWKAQLAQHKSFNRFSPRGCQVSKPAVISSLE
QGKEPWMEEEEIRTWSFPGANPRGGHQCGSALSCDEGVPAAQGASSEKPHECTKCGKALC
CRSDLRVHHGVHAGEKSSACSERGSGFREKLCPDKQGTHTKEKPARDSRSGKTIFRKTRL
CVPGTVHAGAKPYKCWECEKTSHKSRLIEHLRSHTGEKPCGCRECGKAFFQKSHLILRQR
THTGEKPCDCAECGKAAPRTPAS

>gi568815591f:5780890_5983999|GENSCAN_predicted_CDS_3|1332_bp
atggcgtcgtggggggttctgggagttgtagtccctgggggagctgcttttacgcagtgt
tttgaggtgcaggactgcaatgcccgcacttccggaccccagactcttcctacggcgact
gacacctcagacacgcgttgtggggggcggcgctctggctccggggctgtgcccagcgcg
agcgtggccggcacccacttgctgcagagccggcactgcactggggttcttgggggcggc
tcctccagacgtctctgcgggttgtcgggtgctgccgagttgggttgggggacgctacag
gtagtgggtccggagcagcggctggcccctcatctcactgcccttcctcggaccccaccg
tcctctggaagcttgtgcagggcacctgccactgtgaccacctggacgcagatacctgct
ttcccacaacagcaaggaagaaccatggcccaggggtcactgtcattcggggacgtggct
gtgggcttcacccggaaagagtggcagcagctggacctggagcagaggaccctgtaccag
gatgtgatgctggagaactacagccacctgctctctgtgggtgaggaagacttccccgtg
gtcctcgggctgaactgtctgcttgcttggaaggcccagctggctcagcacaaatccttt
aaccgtttctccccaagagggtgtcaagtcagcaaaccagctgtgatctccagtttggag
caggggaaggagccatggatggaggaggaagagataaggacgtggagcttcccaggagcg
aatccacgcggaggtcaccagtgtggaagtgctttaagctgtgacgagggagttcctgca
gctcagggagccagtagtgagaaaccccacgaatgcacgaagtgtgggaaagccttgtgc
tgcagatcggacctcagggtacatcacggggtccacgcgggggagaagtcctctgcgtgc
agtgaacgggggagtggtttcagggagaagctttgccctgacaaacagggaactcacaca
aaggagaaacccgctagagacagcagaagtggtaaaacgatcttccggaagacacgcctg
tgtgtcccgggcacagttcacgccggagcgaagccttacaagtgttgggagtgtgagaaa
acctcccacaagtcgcgcctcatcgagcaccttcgctcccacacgggggagaagccctgc
ggctgcagggaatgcggaaaggcctttttccagaagtcacacctcatcctgcgtcagagg
actcacacgggggagaagccctgcgactgcgcggagtgcgggaaagctgctcccaggact
cctgcctcctga

>gi568815591f:5780890_5983999|GENSCAN_predicted_peptide_4|109_aa
MSITDVLSADDIAAALQECRDPDTFEPQKFFQTSGLSKMSANQVKDVFRFIDNDQSGYLD
EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS

>gi568815591f:5780890_5983999|GENSCAN_predicted_CDS_4|330_bp
atgagcatcacggacgtgctcagtgctgacgacattgcagcagcgctccaggaatgccga
gacccagacacttttgaaccccaaaaattcttccagacatcaggcctctccaagatgtca
gccaatcaggtgaaggatgttttccggttcatagacaacgaccagagcgggtacctggat
gaagaagagcttaagtttttcctccagaagtttgagagtggtgccagagaactgaccgag
tcagaaaccaagtccttgatggctgcggcggataatgatggagatgggaaaattggagca
gaggaattccaggaaatggtgcattcttaa

>gi568815591f:5780890_5983999|GENSCAN_predicted_peptide_5|390_aa
MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQVVRNPIIEKQSKDGKPVIEY
QEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQSC
DLLDIFGGISFFPLDKMTYLKIQSFINRMEESLNIVKYTAFLYNDQLIWSGLEQDDMRIL
YKYLTTSLFPRHIEPEAMSAAVCFMIDGGPVKFSFEYCCSASHSKMNLTGIFCHDLPASV
HPTLDFCRRLDSIVGPQLTVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTV
HMRKTPSVSLTSVHPDLMKILGDINSDFTRVDEDEEIIVKAMSDYWVVGKKSDRRELYVI
LNQKNANLIEVNEEVKKLCATQFNNIFFLD

>gi568815591f:5780890_5983999|GENSCAN_predicted_CDS_5|1173_bp
atggctgcagcggcggccggggccgggagcgggccctgggcggcccaggagaagcagttc
ccgccggcgctgctgagtttcttcatctacaacccgcgcttcgggccgcgcgaaggacag
gttgttcggaatcctataattgaaaaacagagtaaagatggaaaaccagttattgaatat
caagaggaggagttgttggacaaggtttatagctcggtgctgcggcagtgctacagcatg
tacaagctttttaatggtacatttctgaaagccatggaagacggaggcgtcaagcttctg
aaagaaagattagagaaattcttccatcggtatttgcaaacgctacatttgcagtcatgt
gacctacttgacatttttggtggaatcagcttcttcccgttggataaaatgacttatttg
aaaatccagtcctttattaatagaatggaggaaagcctgaatatagtcaaatacactgct
tttctctataacgatcagctcatctggagtggattagaacaagatgacatgagaatttta
tacaaataccttaccacctccctttttccaaggcacatcgaacctgaggccatgagtgcg
gctgtgtgctttatgatcgacggtggaccagtgaagttttcgtttgaatactgttgttca
gcgtcgcacagtaaaatgaatcttactggtattttttgtcatgacttgccagcctctgtc
cacccaacgttggatttttgccgaagactggacagcatcgttgggccccagctcacagtg
ctggcctctgacatctgtgaacagtttaacatcaacaagaggatgtccgggtctgagaaa
gaaccccagtttaagtttatctacttcaaccacatgaatctcgccgagaagagcacagtt
cacatgaggaaaacgcccagcgtgtcgctcacttccgtgcacccggatttaatgaagatt
ctcggtgacatcaacagtgactttaccagagtggatgaagatgaggagatcattgtgaag
gccatgagtgattactgggttgttggaaagaagtctgatcggcgggagctctatgttatt
ttgaatcaaaaaaatgcaaacctgattgaagtaaatgaagaggtcaagaaactttgtgca
acgcagttcaacaacatcttcttcttggattga

>gi568815591f:5780890_5983999|GENSCAN_predicted_peptide_6|1028_aa
XKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAVKS
LYDTGCFFFLTFLSFLIIIDLPEYLLNVFLPRPQTLNLTAVNEAVLIENLEIFRKNGFDF
VIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQMFASRACR
KSDQQGRDTCLALARGPFKSTGWAWRRPRLPGDRSRVWDAESPATPQPEPGEVSGLLERD
FSKQDGNTTRQEMSPAGVPLLGMQLNEVKPKKDRQNVQQNEDATQYEESILTKLIVESYE
GEKVRGLYEGEGFAAFQGGCTYRGDFVKNVPMNHGVYTWPDGSMYEGEVVNGMRNGFGMF
KCSTQPVSYIGHWCNGKRHGKGSIYYNQEGTCWYEGDWVQNIKKGWGIRCYKSGNIYEGQ
WEDNMRHGEGRMRWLTTNEEYTGRWERGIQNGFGTHTWFLKRIRSSQYPLRNEYIGEFVN
GYRHGRGKFYYASGAMYDGEWVSNKKHGMGRLTFKNGRVYEGAFSNDHIAGFPDLEVEFI
SCLDLSSGVAPRLSRSAELIRKLDGSESHSVLGSSIELDLNLLLDMYPETVQPEEKKQVE
YAVLRNITELRRIYSFYSSLGCGHSLDNTFLMTKLHFWRFLKDCKFHHHKLTLADMDRIL
SANNDIPVEEIHSPFTTILLRTFLNYLLHLAYHIYHEEFQKRSPSLFLCFTKLMTENIRP
NAFQIKGNLFREQQRTLYSMSYMNKCWEIYLAYCRPSAAPPHEPTMKMRHFLWMLKDFKM
INKELTAATFMEVIAEDNRFIYDGIDSNFEPELVFLEFFEALLSFAFICVTDQMTKSYTN
VPADDVSGNKHETIYTILNQDAQNKSPSAVMSHESDAAHSDSARSSSSKLELSPDVNKIR
KSEKYERPKDDREEEFNTWVNNMYVFFVNTLFHAYKREEAIKEKIRADRLRSTAQAQQRK
MEDDELEARLNIFILREEEAKRHDYEVDITVLKEPADVSSSHLILDPPKEDVTVSPSSKT
ITSKKKKK

>gi568815591f:5780890_5983999|GENSCAN_predicted_CDS_6|3087_bp
nntaaaacgatgtttgcagaaatggaaatcattggtcagtttaacctgggatttataata
accaaactgaatgaggatatcttcatagtggaccagcatgccacggacgagaagtataac
ttcgagatgctgcagcagcacaccgtgctccaggggcagaggctcatagcggtgaagtct
ctctatgacactggctgctttttcttcctgaccttcctgtcgtttctcatcataatcgac
ttgcctgagtatttgctcaacgtctttcttccccgacctcagactctcaacttaactgct
gttaatgaagctgttctgatagaaaatctggaaatatttagaaagaatggctttgatttt
gttatcgatgaaaatgctccagtcactgaaagggctaaactgatttccttgccaactagt
aaaaactggaccttcggaccccaggacgtcgatgaactgatcttcatgctgagcgacagc
cctggggtcatgtgccggccttcccgagtcaagcagatgtttgcctccagagcctgccgg
aagtcggaccagcaagggcgggacacctgcttggcgctggcgcgcggcccctttaagagc
acagggtgggcctggcggcgtccgcggttgcctggagaccggagccgggtctgggacgcc
gagagcccggcaacacctcagcccgagcccggcgaggtctctgggctcctggagcgagac
ttttccaaacaagatggcaacaccactaggcaagagatgtccccagctggtgtcccattg
ctgggaatgcagctcaacgaagtgaaacccaaaaaagaccgccaaaacgttcagcagaac
gaagatgccacccaatacgaagagtccattctgaccaaactcatagtggaaagctatgaa
ggggaaaaggttcgtgggctgtatgagggagaaggcttcgcagcctttcaaggcggttgt
acctatcgtggcgactttgtgaagaatgtcccgatgaaccacggcgtgtacacgtggccg
gacggcagcatgtatgaaggcgaagtggtcaacggcatgaggaacggattcgggatgttc
aagtgcagcacccagcctgtgtcctacatcggccactggtgcaatggcaagcggcacggg
aagggctccatttattacaatcaagagggtacgtgttggtacgagggagactgggtacaa
aacatcaaaaagggctggggaataagatgttataaatctggaaatatatacgaaggccag
tgggaagacaacatgcgccacggggaggggaggatgaggtggctgaccaccaacgaagag
tacaccgggcggtgggagaggggcatccagaatggctttggaacacacacatggtttcta
aagagaatccgcagttcccagtatcctttgagaaatgaatacataggggagtttgtaaat
ggatatcgtcacggacgtggcaagttttattatgccagtggagccatgtatgatggagaa
tgggtttccaataagaaacatggcatgggccgattaactttcaagaacgggcgtgtgtac
gaaggcgcattctccaatgaccacatagctgggtttccggatcttgaagttgaattcatc
agctgcctggacctgtcttcaggagttgccccaagactgtccaggagcgccgaactgatc
agaaagcttgatggcagtgaaagtcattctgtgttgggatcgagcattgagctggatcta
aatttgctcctggacatgtaccctgagacagtccaacctgaagaaaagaagcaggtggaa
tatgccgtcttaagaaatattacagaattaagaagaatttacagcttttacagcagcctg
ggatgcggccactctctggataatacctttctgatgacaaagcttcacttctggagattt
ctaaaagattgcaaatttcatcaccacaaactaactcttgctgatatggacaggatatta
agtgccaataatgacataccagttgaagaaatccattctccatttacaacaatacttttg
agaacatttttgaattacctcctgcatttggcgtaccacatttatcatgaagaattccaa
aagagaagcccatccctcttcttgtgttttacaaaactgatgaccgagaacattcgtcca
aatgccttccagataaaaggcaatttattccgtgagcaacagcggacgctctactctatg
agttacatgaataagtgctgggagatttatctcgcttactgcagacccagtgcagcgcct
ccccacgagcctacgatgaagatgagacacttcctctggatgctgaaagactttaaaatg
ataaataaagaattaacagcagctacatttatggaggtcatagcagaggataatcgtttc
atatatgatggaattgacagcaactttgaacctgagctggttttcctggaattctttgaa
gctctcttaagctttgcattcatctgtgttactgaccaaatgactaaatcctatacaaat
gttccagctgatgatgtgtctggaaataaacatgaaactatttatacaatactaaatcag
gacgcccagaacaagagtcccagcgcggtcatgagccacgaatcggatgctgctcactct
gacagtgccaggtcatcttccagcaagttagaactctcgcctgatgttaacaaaataagg
aaatcagagaaatatgagagacccaaggatgatcgagaggaagagttcaacacgtgggtc
aataatatgtacgtcttctttgtgaacacgctctttcatgcgtataaacgtgaagaagct
atcaaggagaaaataagggcagacaggttacgtagcacagcacaggcccagcagcggaag
atggaagatgacgaactggaagcaaggctgaacatcttcatcttgagagaggaagaggcc
aagagacatgactatgaggtggacatcacagtgctcaaggagccggcagacgtgtcatcc
tctcacctcatactggaccctcccaaggaggatgtgaccgtgtccccatccagcaagacc
atcaccagcaagaagaagaaaaagtag