GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:17:40

Sequence gi568815591f:137621987_137822850 : 200864 bp : 40.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4424   4524  101  1  2   77   69    88 0.316   3.79
 1.02 Term +   9469   9613  145  1  1   55   48   151 0.362   4.20
 1.03 PlyA +  10277  10282    6                               1.05

 2.12 PlyA -  12169  12164    6                               1.05
 2.11 Term -  14983  14560  424  0  1  -22   50   231 0.013   2.08
 2.10 Intr -  15638  15592   47  2  2  111  111    27 0.016   3.59
 2.09 Intr -  17727  17529  199  2  1   54   86   180 0.004  12.83
 2.08 Intr -  23551  23424  128  1  2  102   61    46 0.006   1.86
 2.07 Intr -  30665  30552  114  2  0   73   86    57 0.030   3.72
 2.06 Intr -  34554  34480   75  0  0   21  116    57 0.018   0.59
 2.05 Intr -  36051  35997   55  2  1  101   15    82 0.019   0.26
 2.04 Intr -  36676  36539  138  0  0  102   95    59 0.847   6.66
 2.03 Intr -  43565  43471   95  2  2   51   85    61 0.033  -0.06
 2.02 Intr -  56666  56571   96  2  0   86   73    70 0.119   4.59
 2.01 Init -  66681  66580  102  0  0   76   78    57 0.103   3.79
 2.00 Prom -  69570  69531   40                              -5.75

 3.00 Prom +  71528  71567   40                              -4.15
 3.01 Sngl + 100001 100816  816  1  0   94   39  1081 0.999  99.30
 3.02 PlyA + 101416 101421    6                               1.05

 4.03 PlyA - 103884 103879    6                               1.05
 4.02 Term - 104437 104255  183  1  0   48   42   172 0.446   5.16
 4.01 Init - 130912 130781  132  1  0   47   63   119 0.241   5.49
 4.00 Prom - 131289 131250   40                              -7.25

 5.00 Prom + 131887 131926   40                              -7.55
 5.01 Init + 131938 132115  178  0  1   62   81   173 0.747  13.47
 5.02 Intr + 144094 144166   73  2  1  116   69    78 0.540   6.25
 5.03 Intr + 144663 144760   98  0  2   66   65     9 0.454  -4.87
 5.04 Term + 144878 145269  392  0  2   30   48   259 0.541  10.26
 5.05 PlyA + 145272 145277    6                               1.05

 6.00 Prom + 148015 148054   40                              -3.65
 6.01 Init + 149705 149784   80  1  2   86   92    16 0.613   2.38
 6.02 Term + 152834 152957  124  2  1   82   48   107 0.715   2.98
 6.03 PlyA + 153820 153825    6                               1.05

 7.00 Prom + 155239 155278   40                              -4.05
 7.01 Init + 155949 156018   70  2  1   75  110    58 0.758   7.96
 7.02 Intr + 164117 164266  150  0  0   24   59   108 0.081   0.71
 7.03 Intr + 198409 198511  103  2  1   66   66   127 0.288   6.61
 7.04 Intr + 198702 198895  194  0  2   40   72    78 0.137  -0.39
 7.05 Term + 198978 199099  122  1  2   37   44   119 0.249   0.06
 7.06 PlyA + 199646 199651    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  14961  14560  402  0  0   76   50   227 0.933  13.72
S.002 Intr +  22302  22388   87  2  0  126   93    77 0.823  11.25
S.003 Term +  50362  50459   98  2  2  114   53    86 0.837   4.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_1|81_aa
GQQQPPQSPTPESCNRLNRTAYKRTQSLVGQRVRAMCLIREGEEAAKSEKNYISKELAAG
PNHYVLAGMGESGGLDPEGEG

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_1|246_bp
ggccagcaacaacccccacagtccccaacacctgagagttgcaaccgcctaaacagaaca
gcttacaagaggacacagagtctagtgggccaaagggtgagagcaatgtgcctgatcagg
gaaggtgaagaggctgctaagagtgaaaaaaactacatctcaaaagaactagctgcagga
cctaatcactatgtactagcaggaatgggagagagtgggggactggatcctgagggtgaa
ggatga

>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_2|490_aa
MMRVYYVSRNRKSWFDIHDVPNNPVVCSSRAFFEENAVNGEHLWLETNVSGDLCYLGEEN
CQVRFANRTKHAVRRASSEFSCGTREAIPTIIEHETVSDFRNRLRNPWNSIELNAERSVK
HEARLGQELLARREAFQASLNHSLKRKSESDKSICKQNKGISKSALRRKCAVCKIVVHTA
CIEQLEKHGSNRKVVGHAQGEESRRRMIGLWCLSATQSADSVGQKNFVRHHWVHRRRQEG
KCKQCGKVRAQPPHGLAGGSPGLCKQLSKYSALVTLGPFVLSSVVPAHLSTFFWLLLLGL
LVLVNPDDLHGEQRPKPQARVAMRTLPVMVFRSQGRINPKVHPQLIKQVSSAGCTRSMAP
ASGEGFRKLLLVVQGEGGALSVEITWQERKKRGASVTQQSDVTGTNREFTHCCECSTKPL
IGDLPPSPKHLLTVPTSNTGDQISAGDSRGDRYPSCISSSDSFRLRAIPEDGRVTHLKTF
SFQDSSQLRE

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_2|1473_bp
atgatgagagtgtattatgtatcaaggaaccgaaagagttggtttgatattcacgatgtt
ccaaacaaccctgtagtctgcagcagcagggccttctttgaggagaatgccgtgaatgga
gaacacctgtggctggagaccaacgtctcgggagacctctgctaccttggagaggagaac
tgccaagtcagatttgcaaacagaacaaaacacgctgttcgaagagcatcaagtgagttt
tcctgcggtactcgagaggcaattccaaccataatagagcatgagactgtcagtgacttt
cgtaacagactaagaaatccctggaactccatagaacttaatgcagagcgtagtgtcaag
cacgaagctagactaggacaggagttattggcaaggagggaggcttttcaggcatcctta
aatcacagcctgaagaggaaatccgagagtgataaaagcatctgcaagcagaataaagga
atctcaaaatcagctctcaggaggaagtgtgcagtctgtaaaatcgtcgtccacaccgcc
tgcattgagcagctagaaaagcatggcagcaataggaaggttgtgggccatgcgcagggt
gaggaaagcaggagaagaatgatagggctgtggtgcctcagtgccacccagagtgcagac
agtgtgggccagaagaattttgtacgtcatcactgggtgcacaggcgtcggcaggagggg
aaatgtaagcagtgtggtaaggtaagagcccagccacctcatggcctcgcaggaggctcc
ccaggcctctgcaagcaactgagcaaatacagtgccctggtcaccctggggccctttgtt
ctttcttcagtagttcccgcccacttgtctaccttcttctggctgctgctgttgggcctg
ctggtacttgtgaacccagatgacctgcacggggagcagaggcccaaacctcaggccagg
gtggcaatgaggacacttcctgtcatggtgttcaggtcccagggcaggattaatccaaaa
gtacatccacagttgattaaacaagtcagttctgcaggctgtacaagaagcatggcacca
gcatctggtgagggcttcaggaaacttctgctcgtggtgcagggggaaggaggagccctg
agtgtagagatcacatggcaagagagaaagaaaaggggtgccagtgtcacccaacaatca
gatgtcactggaactaatagagaattcactcattgctgtgaatgcagcaccaagccactc
ataggggatctgcctccatcacccaaacacctcctaacggttcccacttccaacactggg
gatcaaatttcagcaggagattctagaggggacagatatccaagctgcatcagctcaagt
gactcttttaggctcagggcaattcctgaagatgggagggtgactcatttgaagaccttc
agcttccaagactcttctcaactgagggaatga

>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_3|271_aa
MAGEKVEKPDTKEKKPEAKKADAGGKVKKGNLKAKKPKKGKPHCSRNPVIVRGIGRYSRS
AMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGSTRVVKLRKMPRYYPTED
VPRKLLSHSKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLV
LNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKY
EITEQCKIEQKAVDSQILPKIKAIPQLQGYL

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_3|816_bp
atggcgggtgaaaaagttgagaagccagatactaaagagaagaaacctgaagccaagaag
gctgatgctggtggcaaggtgaaaaagggtaacctcaaggctaaaaagcccaagaagggg
aagccccattgcagccgcaaccctgtcattgtcagaggaattggcaggtattcccgatct
gctatgtattccagaaaggccatgtacaagaggaagtactcagccgctaaatccaaggtt
gaaaagaaaaagaaggagaaggttcttgcaactgttacaaaaccagttggtggtgacaag
aacggcagtacccgggtggttaaacttcgcaaaatgcctagatattatcctactgaagat
gtgcctcgaaagctgttgagccacagcaaaaaacccttcagtcagcacgtgagaaaactg
cgagccagcattacccccgggaccattctgatcatcctcactggacgccacaggggcaag
agggtggttttcctgaagcagctggctagtggcttgttacttgtgactggacctctggtc
ctcaatcgagttcctctacgaagaacacaccagaaatttgtcattgccacctcaaccaaa
atcgatatcagcaatgtaaaaatcccaaaacatcttactgatgcttacttcaagaagaag
aagctgcggaagcccagacaccaggaaggtgagatcttcgacacagaaaaagagaaatat
gagattacggagcagtgcaagattgagcagaaagctgtggactcacaaattttaccaaaa
atcaaagctattcctcagctccagggctacctgtga

>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_4|104_aa
MAGEWRCSRTSRRQNPSDTELKKEGLYSAGSFGKTHISKNQAPQNSDHEKNILELDLDWK
GKVEDRRNRSEAFAAIYVDMAQIGLWGRGDAVNGELQDIWEREN

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_4|315_bp
atggctggtgagtggaggtgtagcaggacaagccgcagacaaaacccctcagacactgag
ttaaagaaggaagggctttattcggccgggagcttcggcaagactcacatctccaaaaac
caagctccccaaaatagtgaccatgagaaaaatattttggaattggacttggattggaag
ggaaaagtggaggacaggagaaatcgatcagaagcatttgcagcaatctatgtggacatg
gctcagattggcctgtggggcagaggggatgcagtgaatggagagcttcaagacatatgg
gagagagagaattga

>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_5|246_aa
MGNQCFYYNIKKEEEEEERGGGGEEEVVVPLTGNYVVSEEEQKQGSLESKRGHGGLCKED
EDKRRKELEQDCSGLTILRGKEESTPRAGQEEFLFLEKLKEGSSGTRDSNREGLQGAGAQ
PQEQVWVVLLWRFWPAQGKSFQMLTSEDPPSEQICDPRPLCSGGPLPDEPGPPTEGVLSA
LQSLIHVCDLMGGPLPDEPGPPTEVILSALQSLVHVCDLMAADLLPLQESHQYERQGQST
QLGRKN

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_5|741_bp
atgggcaatcaatgtttctattacaacattaaaaaagaggaggaggaggaggagcgtgga
gggggaggagaagaagaagtagtagttcccctaactgggaactatgttgtcagtgaggag
gagcaaaaacagggtagtctagaatccaagaggggtcatggggggttatgtaaagaagat
gaagataagaggagaaaagagctagaacaagattgttcaggacttacgatcctaagagga
aaggaagaaagcacacccagggcaggacaggaggaatttctttttctagagaaactgaaa
gagggatcctcaggaactagggactcaaatagggagggcttgcagggtgcaggtgcacag
ccccaggaacaagtctgggtggttctattatggagattctggccagcccaagggaaaagc
ttccagatgctgacatctgaggatcctccaagtgaacagatctgtgatcctaggccactc
tgcagtggggggccactaccagacgagccggggccacccacagaaggtgtcctgtcagct
cttcagagccttattcatgtctgtgacctgatgggggggccactaccagatgagcctggg
ccacccacggaagttatcctgtcagctcttcagagccttgttcatgtatgtgacctgatg
gctgcagatctcctgccattgcaggaaagccaccagtatgaaagacagggccaaagtact
caattaggaagaaagaactga

>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_6|67_aa
MVFMESVTSLTTEQSDRFIQICLTDPGSYMKRRREGLKGERERQAGVKISVTSQDCYEWL
LTISEKT

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_6|204_bp
atggtcttcatggaaagtgtgacctcattaacgactgaacaatctgacagattcattcaa
atatgtctaacagaccctgggtcctatatgaaaaggaggagggaagggcttaaaggagaa
cgagaaagacaagcaggagtcaagatttctgtgacgtcacaggactgttatgagtggctg
ctaaccatttctgaaaagacatga

>gi568815591f:137621987_137822850|GENSCAN_predicted_peptide_7|212_aa
MWLFSPFTFPYFLNKNTRRLAITVLEVLARAIRQEKEIKGIQIGKEEVKLLLCADDIIVY
LENPRVIQKAPRTENSATALAETLADENGCESPAPCRSREAQLVGALSCLSNVWENPVSD
HGLSCLQVKPARKGSQEISQLAATLEVGLCETRPASQQDARASPSRHQALLKALEGESSS
SPAAANLHLISNSLSPVTVPQKSQTEHLVGAK

>gi568815591f:137621987_137822850|GENSCAN_predicted_CDS_7|639_bp
atgtggctattcagtccgttcaccttcccttatttcctcaacaagaatactaggcgattg
gcaatcacagtactagaagtcctggctagagcaatcaggcaagagaaagaaataaagggc
atccaaattggtaaagaggaagtcaaactgttgctgtgtgctgatgatatcattgtatac
ctagaaaaccctagagttatccagaaagctcctagaactgaaaactctgccacagctctg
gcagagacccttgcagatgaaaatggctgtgagagccctgcaccttgcagaagcagagaa
gcgcagctggtgggagcactcagctgtctctccaatgtctgggaaaaccccgtgtctgat
catggcctctcctgcttgcaagtaaagccagccagaaaaggcagccaagaaattagccag
ctggcagcaactctggaggtggggctgtgtgagaccagaccagcctctcagcaagacgca
agggcctcccccagccggcatcaggccttgctaaaggccctagagggggagagcagctcc
tccccagctgctgccaatttgcacctcattagcaacagcctctccccagtgacagtccct
cagaaatcccagactgagcacctcgttggtgctaaatga