GENSCAN 1.0	Date run:  6-Nov-116	Time: 10:39:05

Sequence gi568815591f:128376766_128601913 : 225148 bp : 46.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3325   3515  191  2  2   91  103    45 0.529   5.60
 1.02 Intr +  13055  13277  223  1  1   59   57   216 0.580  13.30
 1.03 Term +  15136  15359  224  2  2  111   44   143 0.894   9.28
 1.04 PlyA +  15499  15504    6                              -8.39

 2.19 PlyA -  15543  15538    6                               1.05
 2.18 Term -  16263  16242   22  2  1  105   55    40 0.926   0.18
 2.17 Intr -  17596  17513   84  0  0  117   99   141 0.976  17.04
 2.16 Intr -  17834  17691  144  1  0   77  109   183 0.999  18.70
 2.15 Intr -  18268  18124  145  2  1   16   19   275 0.960  12.74
 2.14 Intr -  18509  18366  144  0  0   84   94   253 0.968  25.75
 2.13 Intr -  19930  19835   96  2  0   76   98   190 0.959  18.78
 2.12 Intr -  20257  20167   91  1  1  119  113    76 0.984  12.77
 2.11 Intr -  21848  21649  200  0  2   69   87   410 0.968  38.07
 2.10 Intr -  23417  23330   88  2  1   71   76    73 0.956   3.94
 2.09 Intr -  23774  23568  207  2  0  113   67   348 0.990  34.47
 2.08 Intr -  24126  24058   69  0  0   97   48    54 0.612   1.68
 2.07 Intr -  24351  24250  102  0  0   88   68    98 0.835   8.17
 2.06 Intr -  26989  26941   49  0  1  136   89    34 0.638   6.98
 2.05 Intr -  29432  29002  431  2  2  114   82   309 0.368  25.41
 2.04 Intr -  30056  29978   79  1  1  128   89    -4 0.738   3.25
 2.03 Intr -  32601  32524   78  2  0   87   66    40 0.513   0.37
 2.02 Intr -  33189  32991  199  1  1   49   51   206 0.607  11.41
 2.01 Init -  42749  42599  151  2  1   58   21   157 0.004   4.21
 2.00 Prom -  75079  75040   40                              -2.96

 3.00 Prom +  89310  89349   40                              -3.26
 3.01 Init +  89807  89920  114  1  0   75   84    99 0.977   8.41
 3.02 Term +  92080  92406  327  0  0  108   44    92 0.921   1.51
 3.03 PlyA +  93036  93041    6                               1.05

 4.00 Prom +  97822  97861   40                              -3.26
 4.01 Init + 100001 100110  110  1  2   84   49   121 0.953   7.49
 4.02 Intr + 100275 100408  134  0  2   39   91   102 0.604   5.89
 4.03 Intr + 102393 102748  356  1  2   57   76   332 0.829  23.91
 4.04 Intr + 103882 103931   50  0  2   97  108     3 0.587   0.68
 4.05 Intr + 111336 111396   61  0  1   91  109    -3 0.595   0.84
 4.06 Intr + 117039 117178  140  2  2   98  108   145 0.999  16.76
 4.07 Intr + 121271 121377  107  2  2  121   63    89 0.995   9.56
 4.08 Term + 124997 125151  155  0  2   57   48   184 0.987   9.38
 4.09 PlyA + 125345 125350    6                               1.05

 5.04 PlyA - 125554 125549    6                               1.05
 5.03 Term - 145639 145428  212  2  2   85   47    74 0.147   0.46
 5.02 Intr - 155203 155124   80  0  2   80   19    82 0.006  -0.31
 5.01 Init - 193868 193540  329  2  2   64   40   307 0.104  20.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:128376766_128601913|GENSCAN_predicted_peptide_1|212_aa
XLGFQGVKDEAAGCSGGGGEIWVSEQERLVVGDTRTGPGARKRCKRPGEESYQWLGHKVY
SHQQWPGAGCLNANVAARTLGHWLVARWQCTLSLGGYTFAQMPLPMSWNLGHHSSVVQRL
WGHIFHNLVVSSLDHMVLGVFRQMRPQALAMLYFHLCPGCTMWHDEAAEGVFRQLGVRPR
CWNSTAMMTPQQCCLAAGVAEWLAVGEAWETS

>gi568815591f:128376766_128601913|GENSCAN_predicted_CDS_1|639_bp
ngactaggattccaaggagtgaaagatgaagccgctgggtgcagcggagggggtggagaa
atctgggtcagtgaacaggagagactggtagtgggggacaccaggacagggccgggggca
aggaagagatgcaagcggccaggagaggagtcttaccagtggctgggccacaaggtgtac
tctcaccagcagtggcctggtgcaggctgcctgaatgctaatgttgctgcaaggaccctg
gggcactggctggttgcacgctggcagtgcaccctctccctgggtggctacacctttgcg
cagatgccgctgcccatgagctggaacctgggtcaccacagcagcgtggttcagcgcctg
tggggccacatcttccacaatctggtggtgagcagcctggatcacatggtgctgggtgtg
tttcggcagatgagaccacaggcgctggccatgctgtacttccacctgtgccctggctgc
accatgtggcatgatgaggctgcggagggcgttttccggcagctgggtgtgaggccccga
tgctggaattctacagccatgatgacccctcaacaatgctgcctggctgcaggagttgct
gagtggcttgcagtaggtgaagcctgggagacctcctga

>gi568815591f:128376766_128601913|GENSCAN_predicted_peptide_2|792_aa
MLNTHLLPLLLSPTLPRLLASPFTVTVPHRPEAVPWLLYQQILFLTGIPYSGAPGASRLP
PALSCGLRMEGPLTPPPLQGGGAAAVPEPGARQHPGHETAAQRYSARLLQAGYEPESCFL
LELSSVVLLAGVGVQMDRLRRARTLPNNKPLSEIKSPGTNTIFSAGDRAPHTSYPVRACG
VAAPLQAAGGVRAARLSPLCGAGGGGGFRGRGEKGGRGGRTGRRPGPPCRCRSPRPRPRP
ARPAAAAWPRRGVSSSSSSSGGSGGRPRGCLCRVAGSRGSMADYLISGGTGYVPEDGLTA
QQLFASADGLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVTEADMAI
AMALMGGIGFIHHNCTPEFQANEVRKKFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGI
PITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQ
RSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDL
LTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLR
VGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGAS
TVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQG
VSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSGELKFEKRTMSAQIEGG
VHGLHSYEKRLY

>gi568815591f:128376766_128601913|GENSCAN_predicted_CDS_2|2379_bp
atgctgaacacccatctgctcccgctcctcctttcccccactctcccacgcttgctggca
tctccattcacagtgactgtgcctcaccggccagaagctgttccgtggcttctgtaccag
cagattctcttcttaactggtattccatactccggggccccgggagcctccaggctcccg
cccgccctgagctgcggcctccgcatggaggggccactcactccaccaccgctgcaggga
ggcggagccgccgctgttccggagcccggagcccggcaacacccgggacacgagacggcg
gcgcagcggtacagcgcccgactgctgcaggccggctacgagcccgagagctgtttcctc
ctagaactatcttcagtggtcttactggcaggtgttggtgtccagatggatcgccttcgc
agggctaggaccctcccaaataacaaaccgctctctgagattaaaagccctggtaccaac
accattttctcagccggagatagggcgccccacacctcctacccggtccgggcttgcggg
gtcgcagcgccgctgcaggcagctgggggcgtgcgcgcggcgcggctgagccctttgtgc
ggcgcgggcggaggcggcggtttccgcgggaggggcgagaagggcgggaggggcgggagg
acagggcggcgccctggcccgccctgccgctgccgcagcccccgcccccgcccccggccc
gcccggcccgcggcagcagcgtggccgcggcgcggcgtcagcagtagcagcagcagcagc
ggcggcagcggcgggcggccgcgcgggtgtttatgtcgggtcgcggggtctcgcggcagc
atggcggactacctgatcagcggcggcaccggctacgtgcccgaggatgggctcaccgcg
cagcagctcttcgccagcgccgacggcctcacctacaacgacttcctgattctcccagga
ttcatagacttcatagctgatgaggtggacctgacctcagccctgacccggaagatcacg
ctgaagacgccactgatctcctcccccatggacactgtgacagaggctgacatggccatt
gccatggctctgatgggaggtattggtttcattcaccacaactgcaccccagagttccag
gccaacgaggtgcggaagaagtttgaacagggcttcatcacggaccctgtggtgctgagc
ccctcgcacactgtgggcgatgtgctggaggccaagatgcggcatggcttctctggcatc
cccatcactgagacgggcaccatgggcagcaagctggtgggcatcgtcacctcccgagac
atcgactttcttgctgagaaggaccacaccaccctcctcagtgaggtgatgacgccaagg
attgaactggtggtggctccagcaggtgtgacgttgaaagaggcaaatgagatcctgcag
cgtagcaagaaagggaagctgcctatcgtcaatgattgcgatgagctggtggccatcatc
gcccgcaccgacctgaagaagaaccgagactaccctctggcctccaaggattcccagaag
cagctgctctgtggggcagctgtgggcacccgtgaggatgacaaataccgtctggacctg
ctcacccaggcgggcgtcgacgtcatagtcttggactcgtcccaagggaattcggtgtat
cagatcgccatggtgcattacatcaaacagaagtacccccacctccaggtgattgggggg
aacgtggtgacagcagcccaggccaagaacctgattgatgctggtgtggacgggctgcgc
gtgggcatgggctgcggctccatctgcatcacccaggaagtgatggcctgtggtcggccc
cagggcactgctgtgtacaaggtggctgagtatgcccggcgctttggtgtgcccatcata
gccgatggcggcatccagaccgtgggacacgtggtcaaggccctggcccttggagcctcc
acagtgatgatgggctccctgctggccgccactacggaggcccctggcgagtacttcttc
tcagacggggtgcggctcaagaagtaccggggcatgggctcactggatgccatggagaag
agcagcagcagccagaaacgatacttcagcgagggggataaagtgaagatcgcgcagggt
gtctcgggctccatccaggacaaaggatccattcagaagttcgtgccctacctcatagca
ggcatccaacacggctgccaggatatcggggcccgcagcctgtctgtccttcggtccatg
atgtactcaggagagctcaagtttgagaagcggaccatgtcggcccagattgagggtggt
gtccatggcctgcactcttacgaaaagcggctgtactga

>gi568815591f:128376766_128601913|GENSCAN_predicted_peptide_3|146_aa
MKSMDPASGYSNNILTIDQMLKKKQTCIVADATTIKQHVKRATDTYNLGIALEHRKEMLN
LWQKIRGDLIGIDSRNEAFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNCRSS
SSSDTSECDTDSGRKRKQKGLKGFQQ

>gi568815591f:128376766_128601913|GENSCAN_predicted_CDS_3|441_bp
atgaagtctatggaccctgcctcaggttattcaaataacatcctcaccattgatcaaatg
ctcaagaaaaagcagacttgtatagtggccgatgcaactactattaaacaacatgtgaag
agagctactgatacctataatttgggaattgcccttgaacaccgaaaagaaatgctaaac
ctctggcagaagatccgaggggatttgattgggatagactctagaaatgaggccttttat
gacaccttttctacttatacatggtcctggaatgtttgccaagaattactttctcctaag
gacttaaggttatatgatgcctatgtgaatagaaattcctcccataactgcagatcctct
tcctcatcagataccagtgaatgtgacacagactcaggaagaaaaagaaaacagaaaggt
ttaaagggatttcaacaatga

>gi568815591f:128376766_128601913|GENSCAN_predicted_peptide_4|370_aa
MAGSYPEGAPAILADKRQQFGSRFLSDPARVFHHNACQDVKPLSCPFDFLRDNVEWSEEQ
AAAAERKVQENSIQRVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPS
QNQNHLKDWFLENKSEVCECRNNEDGPGLIMEEQHKCSSKSLEHKTQTPPVEENVTQKIS
DLEICADEFPGSSATYRILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNS
EYDPSRCFAFVHDLCDEEKSYPVPKGSLDIIILIFVLSAVVPDKMQKAINRLSRLLKPGG
MVLLRDYGRYDMAQLRFKKEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTMYRVWIQCK
YCKPLLSSTS

>gi568815591f:128376766_128601913|GENSCAN_predicted_CDS_4|1113_bp
atggccggctcctaccctgaaggtgcacctgcaatcctcgccgataagaggcagcagttc
ggaagccggttcctgagcgatccggcgcgcgtcttccaccacaatgcctgccaggacgtg
aagcccctaagctgcccgtttgattttctcagggacaatgtggagtggtcggaagagcaa
gccgcggcggcggagagaaaagtccaggagaacagtatccagcgggtgtgccaggagaaa
caagttgattatgagatcaatgcccacaaatactggaatgacttctacaaaatccacgaa
aatgggtttttcaaggatagacattggctttttaccgaattccctgagctggcacctagc
caaaatcaaaatcatttgaaggattggttcttggagaacaagagtgaagtatgtgaatgt
agaaacaatgaggatggacctggtttaataatggaagaacagcacaagtgttcttcgaag
agccttgaacataaaacacagacacctcctgtggaggagaatgtaactcagaaaattagt
gacctggaaatttgtgctgatgagtttcctggatcctcagccacctaccgaatactggag
gttggctgtggtgtgggaaacacagtctttccaattttacaaacgaacaatgacccagga
ctctttgtttattgctgtgatttttcttccacagctatagaactggtccagacaaattca
gaatatgatccttctcggtgttttgcctttgttcacgacctgtgtgatgaagagaagagt
tacccagtgcccaagggcagtcttgatattatcattctcatatttgttctttcagcagtt
gttccagacaagatgcagaaggctatcaacaggctgagcaggcttctgaaacctgggggg
atggtacttctgcgagattacggccgctatgacatggctcagcttcggtttaaaaaagag
gaactggacacgcttttcaccactgctggactggaaaaagttcagaatctggtggaccgc
cgactgcaggtgaaccgagggaagcaactgacaatgtaccgggtttggattcagtgcaaa
tactgcaagccccttctgtccagcaccagctaa

>gi568815591f:128376766_128601913|GENSCAN_predicted_peptide_5|206_aa
MVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEHFAWRHFYWYLTNEGIQY
LRDYLHLPPEIVPATLPRSRPETGRPWPKGLYVRSAVLPGADKKAEAGAGDPQPSGSPSR
LSAQELRSGADTELGPGFFSVNRVHHIDVLFHFMLCDVNFSQSKEKAVYTLKRTPHRVHP
NSTFSCISEPSASGPPPHSPRGALKP

>gi568815591f:128376766_128601913|GENSCAN_predicted_CDS_5|621_bp
atggtcatggtggccaagaaggatgtccacatgcctaagcacccagagctggcagacaag
aatgtgcccaaccttcatgtcatgaaggccatgcagtctctcaagtcccgaggctacgtg
aaggaacactttgcctggagacatttctactggtaccttaccaatgagggtatccagtat
ctccgtgattaccttcatctgcccccggagattgtgcctgccaccctaccccgtagccgt
ccagagactggcagaccttggcctaaaggtctgtatgtgaggagtgctgtgctacctggt
gccgacaagaaagccgaggctggggctggcgacccgcagccctcagggagcccctcccgc
ctcagcgcccaggagctgcggtccggagccgacaccgagctgggcccaggtttcttcagt
gttaaccgtgttcatcacattgatgtgctgtttcacttcatgctgtgtgatgtgaacttc
agccagagcaaggagaaagcagtatatactctgaaaaggaccccgcaccgtgttcaccca
aacagcaccttctcatgcatctcagagccttcggcctctgggccacctcctcactccccc
aggggtgctctgaagccttaa