GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:00:27

Sequence gi568815591f:104567749_104769570 : 201822 bp : 39.50% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   2968   2853  116  2  2   56   84   101 0.028   5.75
 1.01 Init -  19679  19565  115  2  1   83   35    97 0.151   4.32
 1.00 Prom -  19856  19817   40                              -3.65

 2.02 PlyA -  21024  21019    6                               1.05
 2.01 Sngl -  22980  22555  426  0  0   49   43   209 0.878   8.54
 2.00 Prom -  23073  23034   40                              -7.55

 3.02 PlyA -  23609  23604    6                               1.05
 3.01 Sngl -  24496  24188  309  1  0   98   44   356 0.989  27.85
 3.00 Prom -  25999  25960   40                              -6.15

 4.05 PlyA -  26173  26168    6                               1.05
 4.04 Term -  42843  42702  142  2  1   75   38   131 0.900   3.22
 4.03 Intr -  47014  46721  294  0  0    9   50   237 0.782   7.20
 4.02 Intr -  48087  47937  151  1  1  125   23   117 0.660   7.20
 4.01 Init -  61910  61736  175  2  1   75   48   123 0.130   6.56
 4.00 Prom -  69763  69724   40                              -1.95

 5.00 Prom +  77266  77305   40                              -5.75
 5.01 Init + 100001 100967  967  1  1  125   15  1397 0.021 129.64
 5.02 Intr + 121418 122197  780  0  0   92   91   295 0.165  20.72
 5.03 Term + 122302 122717  416  2  2   -3   44   259 0.617   6.84
 5.04 PlyA + 122831 122836    6                               1.05

 6.00 Prom + 131591 131630   40                              -4.85
 6.01 Init + 131975 132082  108  1  0   88   32    88 0.324   3.47
 6.02 Intr + 138512 138647  136  1  1   -3   86   129 0.604   2.82
 6.03 Intr + 140016 140099   84  1  0   55   83    59 0.426   0.97
 6.04 Intr + 168927 169163  237  1  0   78  116   197 0.450  18.16
 6.05 Term + 169448 169473   26  0  2  108   44    26 0.915  -2.39
 6.06 PlyA + 169552 169557    6                               1.05

 7.05 PlyA - 169598 169593    6                               1.05
 7.04 Term - 171207 171133   75  0  0   94   36    93 0.370   1.56
 7.03 Intr - 174909 174762  148  2  1   80   46   107 0.458   5.02
 7.02 Intr - 177566 177283  284  2  2   91  102    72 0.474   4.19
 7.01 Init - 181832 181095  738  2  0   82   70   209 0.257  13.29
 7.00 Prom - 182765 182726   40                              -5.65

 8.07 PlyA - 183246 183241    6                               1.05
 8.06 Term - 184237 183342  896  2  2  -29   42   509 0.293  26.17
 8.05 Intr - 184780 184256  525  2  0   34   30   444 0.481  25.19
 8.04 Intr - 185043 184967   77  2  2   31  115   137 0.739   8.94
 8.03 Intr - 186162 186108   55  1  1   63   51    45 0.420  -4.58
 8.02 Intr - 192074 191955  120  0  0  103   94   110 0.913  12.65
 8.01 Init - 194034 193896  139  0  1   72   55    71 0.725   2.55
 8.00 Prom - 197073 197034   40                              -6.15

 9.02 PlyA - 197125 197120    6                               1.05
 9.01 Term - 198431 198258  174  2  0   93   42   121 0.671   4.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  25906  25319  588  1  0   49   48   257 0.977  13.73
S.002 Sngl + 100001 100996  996  1  0  125   41  1380 0.966 133.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_1|77_aa
MDEAGNHHSQQTIAGTENQTLHVLTHTSELNNENTWTQGTPEPKIKVKKEKEQSLGGWTL
MIAETAARHLFQDKQRQ

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_1|231_bp
atggatgaagctggaaaccatcactctcagcaaactatcgcagggacagaaaaccaaaca
ctgcatgttctcactcatacgtcggaattgaacaatgagaacacttggacacagggtacc
cccgaacctaaaataaaagttaaaaaagaaaaagaacagtctcttggtggatggacactg
atgatagcagagacagctgctaggcatttgttccaagacaaacagcgacag

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_2|141_aa
MGDFNTPLSTLDRSMRQKVNRDIQELNSALHQADLIDNYRTLHPRSTEYTFFSAPHHTYS
KTDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNRSTTSKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTT

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_2|426_bp
atgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagttaac
agggatatccaggaactgaactcagctctgcaccaagcggacctaatagacaattacaga
actctccaccccagatcaacagaatatacattcttctcagcaccacatcacacttattcc
aaaactgaccacatagttggaagtaaagcactcctcagtaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccgctcaactacatcgaaactgaacaacctgctcctgaatgactactgggta
cataatgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acatag

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_3|102_aa
MGRNQSRKAENSRNQNTSSPPKESSSSPAMEQSWMENDFDELREEGSRRSVITNFSELKE
DVRTHRKEAKNVEKRLDEWLTRINSVEKTLNDLMELKTVARE

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_3|309_bp
atggggagaaaccagagcagaaaagctgaaaattctagaaatcagaatacctcttctcct
ccaaaggaaagcagctcctcaccagcaatggaacaaagctggatggagaatgactttgac
gagttgagagaagaaggctctagacgatcagtaataacaaacttctctgagctaaaggag
gatgttcgaacccatcgcaaagaagctaaaaacgttgaaaaaagattagacgaatggcta
actagaataaacagtgtagagaagaccttaaatgacctgatggagctgaaaaccgtggca
cgagaatga

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_4|253_aa
MSSELEHRHSICTEARLGVALALQGWKQMTDNRRPANQLPFPGEKGIKRNVDFLRKIEGT
WMKLETIIRQTNTGTENQTPHVLTHKWELNKENTWTPGGEHYTLGPVRGKKRKERKRKKE
RKKERKKERKKERKKEGRKEGRKEGEKRREEKRREEKRREEKRREEREEKRRLFGQYRTV
VLEEFGRKWAYSELSPHSTHTQCVFTRLRFELEVTLVALLVLKPVDPHRNYITISLGLQF
ANQLEKSWISQPP

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_4|762_bp
atgagcagtgagctggaacacagacactctatctgcactgaagccaggcttggtgtagca
ttagctctgcagggttggaaacaaatgacagataacagaaggcctgctaaccagcttcca
tttccgggtgaaaagggcatcaagagaaatgtggacttcttgaggaagatagaagggaca
tggatgaagctggaaaccatcattcggcaaactaacacaggaaccgaaaaccaaacaccg
catgttctcactcataagtgggagttgaacaaagagaacacatggacaccgggaggggaa
cattacacactggggcctgtcaggggaaagaaaagaaaagagagaaagagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaggaaggaaggaa
ggaaggaaggaaggagagaagagaagagaagagaagagaagagaagagaagagaagagaa
gagaagagaagagaagagagagaagagaagaggaggctctttggacagtaccgtactgta
gtcctggaggaatttggaagaaagtgggcctattcagaactttctcctcattccacacat
actcagtgtgtgtttaccagactcagatttgaactggaagttacactagtggctctcctg
gttctcaagcctgtggacccacacaggaactatatcaccatctctcttgggctccagttt
gccaaccagctggagaaatcttggatttctcaacctccatga

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_5|720_aa
MAASAKKKNKKGKTISLTDFLAEDGGTGGGSTYVSKPVSWADETDDLEGDVSTTWHSNDD
DVYRAPPIDRSILPTAPRAAREPNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFFRGLN
ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLSNRRIRVDVADQALDKDRD
DPPFGRDRNRDSDKTDTDWRARPATDTFDDYPPRRGDDSFGDKYRDRYDSDRYRDGYRDG
PRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRAFGSGYRRDDDYREGRDCYEDQYDR
RDDRSWSSRDDYSRDDYRRDDREFRVGTALTQLENLNAMGIIGSQGGSVQVVALNCQRQG
GCSYHSGQQRQSSNQNSLTPVELRHWLINHGVPRSEIDRKPTAFLLNLYNQETSRLSGQK
TNLNYKNREPQPLSQFPDLNQFTDPEPLEWRGHWVPLRRDPTTLLTIYTVNLSPILPQQD
LQPFSRVTVHWEKGNHQTFWGLLDTGSELMLIPGDPKYHCGPPVTVEAYGGQVINEVLAQ
VQLTVGPFGPRTHSVMISPGPECIIGTGILSSWQNPHIGCLTGIAEISATIKDLKDAGVV
IPNTSPFNSPIWPVPKTDGSWRTTVGYCKLTQVVAPVAAAVPDVVSLLKQINTSPGTWCA
ATDLANVFFSIPIYKAHQKQFAFSWQGQQYTFTILPQGYINSPTLCHNLVRKDLDHFSLP

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_5|2163_bp
atggcggcctcagcaaaaaagaagaataagaaggggaagactatctccctaacagacttt
ctggctgaggatgggggtactggtggaggaagcacctatgtttccaaaccagtcagctgg
gctgatgaaacggatgacctggaaggagatgtttctacaacttggcacagtaacgatgac
gatgtgtacagggcgcctccaattgaccgttccatccttcccactgctccacgggctgct
cgggaacccaatatcgaccggagccgtcttcccaaatcgccaccctacactgcttttcta
ggaaacctaccctatgatgttacagaagagtcaattaaggaattctttcgaggattaaat
atcagtgcagtgcgtttaccacgtgaacccagcaatccagagaggctgaaaggttttggt
tatgctgaatttgaggacctggattccctgctcagtgccctgagtctcaatgaagagtct
ctaagtaacaggagaattcgagtggacgttgctgatcaagcactggataaagacagggat
gatcctccttttggccgtgatagaaatcgggattctgacaaaacagatacagactggagg
gctcgtcctgctacagacacctttgatgactacccacctagaagaggtgatgatagcttt
ggagacaagtatcgagatcgttatgattcagaccggtatcgggatgggtatcgggatggc
ccacgccgggatatggatcgatatggtggccgggatcgctatgatgaccgaggcagcaga
gactatgatagaggctatgattcccggataggcagtggcagaagagcatttggcagtggg
tatcgcagggatgatgactacagagaaggcagggactgctatgaagaccaatatgacaga
cgggatgatcggtcgtggagctccagagatgattactctcgggatgattataggcgtgat
gatagagagtttagagtgggaactgcactcactcaattagaaaatttaaatgccatggga
ataattggatcccaaggtggcagtgtccaagtagtggcactcaactgtcaaaggcaaggt
gggtgtagttaccacagtggacagcagaggcaaagcagcaatcagaatagtctgactcct
gtagagctcaggcattggttaattaatcatggtgttcctagaagtgaaattgataggaag
cctactgcattcttacttaatttgtataaccaggaaacttccaggttgagtggacaaaag
actaatttgaattataaaaatagagaaccacagcccctcagtcaatttccagacttgaac
cagtttacagacccagaaccccttgaatggaggggacactgggtccccttaaggagggac
cccactacactactgacaatttatactgttaatctttctcccatccttccccaacaagac
ctccagccttttagcagagtaactgtgcattgggaaaaggggaatcatcagactttttgg
ggactactggacactggctctgagctgatgttgattccaggggacccaaagtatcattgt
ggtcctccagttacagtagaggcttatggaggtcaggtaattaatgaagttttagctcag
gtccaacttacagtgggtccatttggtccccggactcattctgtgatgatttccccaggg
ccagaatgcataattggcacaggcatacttagcagctggcagaatccccacattggctgc
ctgacagggattgcagagattagtgccaccatcaaggacttaaaagatgcaggggtggtg
attcccaacacatccccattcaactctcctatttggcctgtgccaaagacagatggatct
tggagaacgacagtgggttattgtaagcttacccaagtggtggccccagttgcagctgct
gtaccagatgtggtttcattgcttaaacaaattaacacatctcctggtacctggtgtgca
gccactgatttggcaaatgtctttttctccattcctatttataaggcccaccagaagcaa
tttgccttcagctggcaaggccagcaatataccttcactatcctacctcaggggtatatc
aactctccgactttgtgtcataatcttgttcgcaaagatcttgatcacttttcccttcca
taa

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_6|196_aa
MTLSKQFSPASPRRTEFSYPHSFGARPLVYTLTSAGGITCCQPVSPPRGEPEKDITHKPL
TRTLTIWCLALADDSASLISLECKEPLRFPIQCRKEDALEEKRYVFGNWTACLVLGCMIF
PDGWDSDEVKRMCGEKTDKYTLGACSVRWAYILAIIGILDALILSFLAFVLGNRQDSLMA
EELKAENKGLPSELNG

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_6|591_bp
atgaccctatcaaagcagttttccccagcatcccctcgcaggacagaatttagttatcct
catagctttggtgcaaggcccttggtttacacgctgacatcagctgggggcatcacctgc
tgccagccagtgtcaccaccgagaggtgaaccagaaaaggatattactcacaagcctctg
acaaggacactgactatatggtgtctagctctggccgatgactcagcatccctcatatca
ctggaatgtaaagaaccattacgattccctatccagtgcaggaaggaggatgcattagag
gagaagagatacgtgtttggaaactggactgcctgccttgtgcttggctgtatgattttc
cctgatggctgggactcagatgaagtaaaacggatgtgtggagaaaagacagacaagtac
actcttggggcttgctcagtccgctgggcatacatcctggctattattggaattttggat
gccctgatcctctcatttctagcatttgtgcttggtaatcgacaagacagcttgatggca
gaggaactgaaggcagaaaacaaaggtttgccatcagaacttaatggctaa

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_7|414_aa
MIPKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPT
ICQTFVGRALQPVRDKFSDCYIIHYIDDILCATETRDKLIDCYTFLQAEVANAGLAIASD
KIQTSTPFHYLGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMS
NLFSILRGNSDLNSKRMLTPEATKEIKLVEEKIQSAQINRIDPLAPRWAPDVGVGCPSTP
VGVSRKSLDGGCSSCYLFYVPLGRRRKRKGQLLYQESKSFPGTLQPTPADNLLAREEREL
GSVSQPPGSALAWIFCGEYQKLSFGNTKFEKLIRYSKKGIGPGSLILELLRYWPKAPQLV
SETGLALGSLIQVDNLSTTPHRHSQCGHSMNKMEETTVTYANGEDDEHRKIMQR

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_7|1245_bp
atgatcccaaaagattggcctttaattataattgatctaaaggattgcttttttaccatc
cctctggcggagcaggattgcgaaaaatttgcctttactataccagccataaataataaa
gaaccagccaccaggtttcagtggaaagtgttacctcagggaatgcttaatagtccaact
atttgtcagacttttgtaggtcgagctcttcaaccagttagagacaagttttcagactgt
tatattattcattatattgatgatattttatgtgctacagaaacgagagataaattaatt
gactgttatacatttctgcaagcagaggttgccaatgcaggactggcaatagcatctgat
aagatccaaacctctactccttttcattatttagggatgcagatagaaaatagaaaaatt
aagccacaaaaaatagaaataagaaaagacacattaaaaacactaaatgattttcaaaaa
ttgctgggagatattaattggattcggccaactctaggcattcctacttatgccatgtca
aatttgttctctatcttaagaggaaactcagacttaaatagtaaaagaatgttaacccca
gaggcaacaaaagaaattaaattagtggaagaaaaaattcagtcagcgcaaataaataga
atagatcccttagccccacgttgggcgccagatgtaggggtgggttgcccctccacacct
gtgggtgtttctcgtaagtcattggatggtggctgcagttcctgctatctcttttatgtt
cctttaggaagaaggagaaagaggaaggggcagcttctgtatcaggaaagcaaaagtttc
ccaggaaccctgcagccgactcctgcggacaatttgttggccagagaggaaagggagttg
ggaagtgtcagccaaccaccagggtctgctttggcttggatattttgtggggagtatcag
aagctcagttttggaaatactaagtttgagaagctaattagatattcaaaaaagggtatc
gggccaggaagcttaattttggaactattaagatattggcccaaggctcctcagctggtg
tcagagacaggactagcactgggcagcttgatccaagtggacaatctttccactacacca
caccgccactcccagtgtggccatagcatgaacaagatggaagaaactacggtcacatat
gcaaatggagaagatgatgaacacagaaaaattatgcaaagataa

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_8|603_aa
MKFRLVTSCSEMKIPAGYVFEEIHSTTVLLASESNQMKGSCVYELYGLLWGKSDDVSPCS
HSKCPENLGAFPLPFPEAELLRKNPRAREGKSMPMILSKFCQPERVKVHSSVVIEDKSTR
DPEYVYSQPYEQGTLDLKDWKRIGKELKQAGRKGNIIPLTVWNDWAIIKAALEPFQTEED
SVSVSDAPGSCLIDCNEKTRKKSQKETEGLHCEYVAEPVMAQSTQNVDYNQLQEVIYPET
LKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQPQTQVKENKTQPPVAYQYWPPAELQY
RPPPERMPPAPQGRAPYPQPPTRRLNPTAPPSRQGSELHEIIDKSRKEGDTEAWQFPVTL
EPMPPGEGAQEGEPLTVEARYKSFSIKMLKDMKERVKQYGPNSPYMRTLLDSIAHGHRLI
PYDWEILAKSSLSPSQFLQFKTWWIDGVQEQVRRNRAANPPVNIDADQLLGIGQNWSTIS
QQALMQNEAIEQVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVARLQDVAQKSI
ADEKACKVTVELMAYENANPECQSAIKPLKGKVPAGSDVISEYVKAWIESEELCIKLCLW
LKQ

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_8|1812_bp
atgaagttcaggcttgtgacaagctgcagtgaaatgaaaattccggcaggctatgtattt
gaagaaattcactctacgactgttctacttgcttctgagtcaaatcaaatgaagggatcc
tgcgtttatgaactgtacggtctgttgtggggaaagtcagatgatgtgagtccttgttca
cacagtaagtgcccagaaaaccttggtgcttttcctcttcccttccctgaagctgaactt
ctgcggaaaaatccaagagcacgtgaaggcaaatctatgcctatgatcctgtctaaattc
tgccagcctgaaagggtgaaggtacactcgagcgtggtcattgaggacaagtcgacgaga
gatcccgagtacgtctacagtcagccttacgaacaaggaactttagatctaaaagattgg
aaaagaattggtaaggaactaaaacaagcaggtaggaagggtaatatcattccacttaca
gtatggaatgattgggccattattaaagcagctttagaaccatttcaaacagaagaagat
agcgtttcagtttctgatgcccctggaagctgtttaatagattgtaatgaaaagacaagg
aaaaaatcccagaaagaaacagaaggtttacattgcgaatatgtagcagagccggtaatg
gctcagtcaacgcaaaatgttgactataatcaattacaggaggtgatatatcctgaaacg
ttaaaattagaaggaaaaggtcccgaattagtggggccatcagagtctaaaccacgaggc
acaagtcctcttccagcaggtcaggtgcctgtaacattacaacctcaaacgcaggttaaa
gaaaataagacccaaccgccagtagcctatcaatactggccgccggctgaacttcagtat
cggccacccccagaaagaatgcccccagcaccacagggcagggcgccataccctcagccg
cccactaggagacttaatcctacggcaccacctagtagacagggtagtgaattacatgaa
attattgataaatcaagaaaggaaggagatactgaggcatggcaattcccagtaacgtta
gaaccgatgccacctggagaaggagcccaagagggagagcctctcacagttgaggccaga
tacaagtctttttcgataaaaatgctaaaagatatgaaagagagagtaaaacagtatgga
cccaactccccttatatgaggacattattagattccattgctcatggacatagactcatt
ccttatgattgggagattctggcaaaatcgtctctctcaccctctcaatttttacaattt
aagacttggtggattgatggggttcaagaacaggtccgaagaaatagggctgccaatcct
ccagttaacatagatgcagatcaactattaggaataggtcaaaattggagtactattagt
caacaagcattaatgcaaaatgaggccattgagcaagttagagctatctgccttagagcc
tgggaaaaaatccaagacccaggaagtgcctgcccctcatttaatacagtaagacaaggt
tcaaaagagccctaccctgattttgtggcaaggctccaagatgttgctcaaaagtcaatt
gccgatgaaaaagcctgtaaggtcacagtggagttgatggcatatgaaaacgccaatcct
gagtgtcaatcagccattaagccattaaaaggaaaggttcctgcaggatcagatgtaatc
tcagaatatgtaaaagcctggattgaatcggaggagctatgcataaagctatgcttatgg
ctcaagcaataa

>gi568815591f:104567749_104769570|GENSCAN_predicted_peptide_9|57_aa
KAKIPTKLDITIHRNYFSIRIIPYHHMDFCANSGTNDGIAEKILKQAIQQGLANYES

>gi568815591f:104567749_104769570|GENSCAN_predicted_CDS_9|174_bp
aaagccaagataccaacaaagctcgacattaccatccacagaaactactttagcattagg
atcattccgtatcatcatatggatttctgtgccaactcaggaacaaatgatggtatagca
gaaaagatattgaaacaagccatacagcagggtttagcaaattatgagagctga