GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:12:08

Sequence gi568815590r:7871664_7976395 : 104732 bp : 41.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9759   9816   58  2  1   74  110    43 0.875   4.85
 1.02 Term +  10760  10905  146  0  2  107   42   162 0.684  10.59
 1.03 PlyA +  12660  12665    6                               1.05

 2.06 PlyA -  15679  15674    6                               1.05
 2.05 Term -  17153  16981  173  0  2   75   39   130 0.941   3.81
 2.04 Intr -  19674  19348  327  1  0   38   22   289 0.561  12.05
 2.03 Intr -  20008  19829  180  2  0   -3   81   174 0.811   6.52
 2.02 Intr -  20334  20071  264  1  0    9   37   335 0.557  17.06
 2.01 Init -  20603  20489  115  2  1   28   20   188 0.098   6.42
 2.00 Prom -  20732  20693   40                             -10.84

 3.00 Prom +  21663  21702   40                              -8.45
 3.01 Init +  22488  22674  187  2  1   92  109   179 0.594  19.82
 3.02 Intr +  24887  25006  120  0  0   51   11   134 0.223   1.55
 3.03 Intr +  25324  25460  137  2  2   24   92    48 0.088  -1.83
 3.04 Intr +  34994  35112  119  1  2    3  109   157 0.962   7.64
 3.05 Intr +  36609  36714  106  0  1   70   65    72 0.466   2.40
 3.06 Term +  36932  37006   75  1  0  108   54    65 0.548   1.96
 3.07 PlyA +  39267  39272    6                               1.05

 4.02 PlyA -  42189  42184    6                               1.05
 4.01 Sngl -  43893  43582  312  0  0   84   53   297 0.950  21.48
 4.00 Prom -  45032  44993   40                              -6.45

 5.00 Prom +  45539  45578   40                             -11.44
 5.01 Init +  47035  47255  221  0  2   92   58   127 0.646   7.46
 5.02 Intr +  50064  50253  190  0  1   15  113    93 0.336   3.17
 5.03 Intr +  54672  54734   63  2  0   59   98    51 0.133   1.20
 5.04 Intr +  59901  59987   87  2  0   16  109    63 0.304   0.45
 5.05 Intr +  60649  60705   57  0  0   82   86    67 0.318   4.06
 5.06 Intr +  77466  77592  127  2  1   51  109   147 0.472  12.43
 5.07 Intr +  78370  78465   96  2  0   84  115    34 0.963   4.76
 5.08 Intr +  79002  79084   83  1  2   64  115    34 0.995   2.14
 5.09 Term +  80144  80728  585  1  0   55   44   375 0.996  23.32
 5.10 PlyA +  81029  81034    6                               1.05

 6.04 PlyA -  81228  81223    6                               1.05
 6.03 Term -  83655  83083  573  0  0   47   42   236 0.404   8.36
 6.02 Intr -  90475  90106  370  0  1   81   74   147 0.553   6.78
 6.01 Init -  92108  92053   56  2  2   86   39    43 0.522   0.01
 6.00 Prom -  92733  92694   40                              -7.15

 7.03 PlyA -  93102  93097    6                               1.05
 7.02 Term -  96103  95681  423  1  0   50   38   396 0.866  25.11
 7.01 Init -  96881  96651  231  2  0  111   44   237 0.964  19.91
 7.00 Prom -  98299  98260   40                             -12.72

 8.02 PlyA -  99220  99215    6                               1.05
 8.01 Sngl - 101590  99998 1593  1  0  111   43  1245 0.992 117.39
 8.00 Prom - 101715 101676   40                              -4.65

 9.03 PlyA - 102615 102610    6                               1.05
 9.02 Term - 103346 103205  142  1  1   96   48    95 0.626   2.72
 9.01 Intr - 103733 103598  136  0  1   63   33   149 0.504   5.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_1|67_aa
MRIHYLLFALLFLFLVPVPGHGGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGR
KCCRRKK

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_1|204_bp
atgaggatccattatcttctgtttgctttgctcttcctgtttttggtgcctgttccaggt
catggaggaatcataaacacattacagaaatattattgcagagtcagaggcggccggtgt
gctgtgctcagctgccttccaaaggaggaacagatcggcaagtgctcgacgcgtggccga
aaatgctgccgaagaaagaaataa

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_2|352_aa
MLAVDAVIAELKKQSKPVTKPEEIAQVATISANGDKEIGEKCEFQDAYVLLHEKKISSVQ
SIVPALEIANAYCKPLVIIAEDIDGEALTTLILNRLKVGLQVVAVKAPGFGDNRKNQLKD
TVIATGGEVGEVTVIKDDAMLLKGKGNKSQIEKCVQEIIDQSDVTTSEYEKEKLNGETFR
WSSCAEANEDKIIGIEIIKRTLKIPAMTIAKNAGVDGFLIVEKIMQSSSEVGYDTMLGDV
VNMVEKDIIDPTKVVRTALLDAAGMASLLTTAAVVVTKIPKEGNSPGMGAMCGMGESSLE
LLHKDLPPDLSTRTGTIGAQIANWEERSTKQKCAHGHCNKVYQEVLGILQRV

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_2|1059_bp
atgttagctgttgatgctgtaattgctgaacttaaaaagcagtctaaacctgtgaccaaa
cctgaagaaattgcacaggttgctacaatttctgcaaatggagacaaagaaattggtgag
aaatgtgaattccaggatgcctatgttctgttgcatgaaaagaaaatttctagtgtccag
tccattgtacctgctcttgaaattgccaatgcttactgtaagcctttggtcataattgct
gaagacattgatggagaagctctaactacactcatcctgaataggctaaaggttggtctt
caggttgtggcagtcaaagctccagggtttggtgacaatagaaagaaccagcttaaagat
acggttattgctactggtggagaagttggagaggtcactgtgatcaaagatgatgccatg
ctcttaaaaggaaaaggtaacaagtctcaaattgaaaaatgtgttcaagaaatcattgac
cagtcagatgtcacaactagtgaatacgaaaaggaaaaactgaatggagaaactttcaga
tggagtagctgtgctgaagctaatgaagataaaataattggcatagaaattattaaaaga
acactcaaaattccagcaatgactattgctaagaatgcaggtgttgatggatttttgata
gttgagaaaattatgcaaagttcctcagaagttggttatgatactatgttaggagatgtc
gtgaatatggtggaaaaagacattattgacccaacaaaggttgtgagaactgctttattg
gatgctgctggcatggcctctctattaactacagcagctgttgtagtcacaaaaattcct
aaagaagggaacagccctggaatgggtgcaatgtgtggaatgggagagtcatccttggag
cttctgcacaaagatttaccccctgacctgagcaccaggacaggaaccataggtgctcag
atagcaaactgggaggagagaagcacaaaacaaaagtgtgcccatggacattgcaataaa
gtataccaggaagttcttggaattcttcagagagtttag

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_3|247_aa
MLPVLPEALSPSRVPGFEPALYHPQELNVRAMDRIRWKELSIWPETVPRYSGKTGRRTEW
AAEGINKLAPVVSLEQNAAKSHEEAKKLLWLMRIQKGLPHQRPSPTQRPVPSWNHSGSAK
GGDAQSSVLHKDSLLLAKVSYAIMPPTEGASEAIGQCQSSATKRRRSLKESVREPWARVP
GAVGMAARKAGLAAKGEGEGVEGYLPLSQKSREGVETRREGVEKMKGIEIKRRERLKSGK
EKVVEGQ

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_3|744_bp
atgctcccggtgctgccagaggccctgagcccctccagggtccctgggtttgagccagcc
ctgtatcatccccaggagctgaatgtccgagcaatggatagaattagatggaaagagctc
tcaatttggcctgagactgtccccagatactcaggaaaaacaggacgtcgcacagagtgg
gcagcagaaggtataaacaaattggcacctgtggtctccctggaacaaaatgctgcaaaa
agccatgaggaggccaagaagctgctgtggctgatgcggattcagaaagggctccctcat
cagagaccaagcccaactcaaagaccagttccctcatggaatcatagtggatctgccaag
ggaggggatgcccagtcctctgttcttcacaaggactcccttcttctggctaaggtttct
tatgcaattatgcctcctacagagggggcttctgaggcgatcgggcagtgtcagtcttca
gccactaagcggagaagatctctgaaggagtcagtcagagagccttgggccagagttcca
ggggctgtgggaatggctgccagaaaagcgggacttgccgctaagggtgaaggagaaggg
gttgaagggtacttgcccctctcccagaaaagcagagaaggggtagagacaaggcgagaa
ggagttgagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaag
gagaaagtggttgagggacagtga

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_4|103_aa
MEQAHEQSGYEGGQGGQAQAQGHEGHMLELAALSTGALERPRHISTGKEDGNGPGWEVAA
AAAGVLSPGVKGGSLCGRSTDTSVPVHSQSHPWSFCTNIYPLT

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_4|312_bp
atggagcaggcacatgagcagagtggctatgaggggggacaaggtgggcaggctcaggcc
cagggacatgaaggccacatgctggagcttgctgccctgagcacgggtgccttggagcgg
cccaggcacatctcgactgggaaggaagatggcaacggaccaggatgggaggtggcagca
gcagcagcaggtgtcctcagccctggggtgaaaggagggtctctgtgtggacgcagcact
gacacctctgtgcctgtgcattctcagagtcatccttggagcttctgcacgaatatttac
cccctgacctga

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_5|502_aa
MLLELPEAVSPSQVPGFEPALYHPQELNVPAMDRTRWNRLPVWPETVPRHSGKTGHPTER
AGDLQFTDPESVPLESLTSLECPSQLSRPGVRDGTGGVFWVAPPVTQNQQEQRDIRIQNP
MSERHKVCVSIILNKSTVSLSQGTYSTQPVEGGGTNCKRPGQRPWVVVVTAMGGMGLCSG
PGIVPRQRFLVNLLLNSSALFRALFKEKVTFEDVAIDFTQEEWDMMDTSKRKLYRDVMLE
NISHLVSLGYQISKSYIILQLEQGKELWWEGRVFLQDQNPDRESALKKKHMISMHPIIRK
DTSTSMTMENSLILEDPFEYNDSGEDCTHSSTITQCLLTHSGKKPCVSKQCGKSLRNLLS
PKPRKQIHTKGKSYQCNLCEKAYTNCFYLRRHKMTHTGERPYACHLCGKAFTQCSHLRRH
EKTHTGERPYKCHQCGKAFIQSFNLRRHERTHLGQKCYECDKSGKAFSQSSGFRGNKIIH
IGEKPPACLLCGKAFSLSSDLR

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_5|1509_bp
atgctcctggagctgccagaagccgtgagcccctcccaggtccctgggtttgagccagcc
ctgtatcatccccaggagctgaatgtcccagcaatggatagaactagatggaaccggctc
ccagtttggcctgagactgtccctagacattcaggaaaaacaggacatcccacagagcgg
gcaggtgatctccagttcacagaccctgagtctgttcccctcgaatctctgacatctttg
gaatgtccttcccagctctccagaccaggggtcagggatggcacaggaggagttttttgg
gttgctcctccagtaacccaaaaccaacaggagcaacgggatattagaattcaaaacccc
atgtcagaaagacacaaagtctgtgtcagtatcatcttgaataaatccacggtgtccttg
tcccaagggacatacagcacacagcctgtggagggtggaggaaccaactgcaagcgtcct
ggacaacgaccttgggtagtggtagtgacagcaatgggtgggatgggcctgtgctctggc
cctggaatagtgcccaggcagagattcctcgtcaatttgctgctgaattctagtgccctc
tttcgtgccctcttcaaggagaaagtgacttttgaagatgtagctattgacttcacccag
gaagagtgggacatgatggacacatccaaaagaaagctgtacagagatgtgatgctggaa
aatatcagtcacctggtgtccctcgggtaccagataagcaaatcctatataattttgcag
ctggagcaaggaaaagagctgtggtgggaaggaagagtatttcttcaagaccagaatcca
gacagggaaagtgcccttaagaaaaaacacatgatatccatgcatcctatcatcagaaaa
gacacatccaccagtatgacaatggagaactctctcattctggaggatccttttgaatat
aatgattcgggagaagattgcactcacagttccacaataactcagtgtttgttaactcac
agtggaaagaaaccctgtgtcagcaaacagtgtggaaaatcccttcgtaatcttttgtcc
cctaaaccacgtaaacaaattcatactaaaggtaaatcatatcaatgtaatctatgtgaa
aaggcctatactaattgcttttaccttagacggcacaagatgactcacactggagagagg
ccatatgcatgtcatctatgtggaaaagccttcactcagtgttctcaccttagaagacat
gagaaaactcacacgggagagagaccatataagtgtcatcaatgtgggaaagcctttatt
caatcctttaaccttcgaagacatgagagaactcaccttggacaaaagtgttatgaatgt
gataaaagtgggaaagcctttagtcaaagctctggctttagaggaaacaaaataattcac
attggagagaaaccacctgcttgtcttctatgtgggaaggccttcagtctgtcctccgac
cttagatga

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_6|332_aa
MNSVKPEARTNIKFTVKLGKVTLNFNSYYSVPQGTRSTFKFSGLTTLSFGRKVLETFNVQ
WMKQPGPTAHNTLTGTQRKRLRICWVELRTDPETQGVGRGSNQEGSGPDLLLGPAPLELA
VFSDPEADFTDGKEVQYFWSSPPLRGSGRAAPEDAPGPAGASGPSGGIQPQADTDALRAR
NRAACAGPAVSGLAKRAASPTPLPEPPRRPQPQSQGDGASLTMGEENSGPPWRPGPPREA
DRACALHGRKGGFHCPLPAMRWQHRTFGLSGGPESESLKFRCGLFSTFFWKIKWKLSTIS
CALIKEDGNKEANSKISIQKSIDSLYVEGRRA

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_6|999_bp
atgaattctgtcaaacctgaagcaagaacaaacatcaaatttacggtgaagctggggaaa
gtgactttaaacttcaatagctattactctgttccacaaggaaccaggtcaacattcaaa
ttcagtggtctgacaactctaagctttggccggaaagtattggaaacatttaatgtgcag
tggatgaagcagcccggccccactgcacacaacacactcacggggactcaaaggaagaga
ctcaggatctgctgggtggaactgaggacagacccagaaacacagggggtggggaggggg
tcaaaccaggagggctcaggacctgacctcctcctaggccctgcccctctggaactcgca
gttttttctgacccagaagcggatttcactgatggaaaagaagttcagtatttctggtcc
agcccacctctgcggggctctgggagggcagcgccggaggatgctccgggcccagcgggg
gcatccgggcccagcgggggtatccagcctcaggctgatactgacgccctgagggcgcgg
aatagggcggcctgcgcagggcccgccgtctcgggccttgcaaaaagagcggcctctcca
acgcccctaccggaacctccccggaggccccagccccaaagccagggcgatggcgcctcc
ctgacaatgggtgaagaaaactcaggtcctccctggagacccggcccgccgcgggaggca
gaccgcgcatgcgccctgcatggccggaaaggtgggtttcattgccctctgccggccatg
aggtggcagcacaggacgtttggtcttagcggtggacctgagtctgaatcactgaaattc
aggtgtggattattcagtactttcttttggaagatcaaatggaaattgagtacgatatct
tgtgctttaattaaagaagatggaaataaagaagcaaattcaaaaatcagtatacaaaag
tcgattgattccctctatgtggagggaagacgagcttga

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_7|217_aa
MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVTR
QLAPREKLPPSSRRPAAKAPAAKTLTLHTSAKVLILVLKRFSDVTGNRLAKNVQYPECVD
MQPYMSQQNTGPLFYVLYAVLIVTGWSCHNGHYFSCVKAQEGQWYKMDDAEVTASGITSP
LSQQAYVLFYIQKNEFGRPSYRVSAGREPRALCAEDN

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_7|654_bp
atggaggacgactcactctacttgggaggtgagtggcagttcaaccacttttcaaaactc
acatcttctcggccagatgcagcttttgctgaaatccagcggacttctctccctgagaag
tcaccactctcatcggagacccgtgtcgacctctgtgacgatttggctcctgtgacaaga
cagcttgctcccagggagaagcttcctccgagtagcaggagacctgctgcgaaggcgcct
gccgccaagacgttaactttacacacttctgccaaggtcctcatccttgtcttgaagaga
ttctccgatgtcacaggcaacagacttgccaagaatgtgcaatatcctgagtgcgttgac
atgcagccatacatgtctcagcagaacacaggacctcttttctatgtcctctatgctgtt
ctcatcgtcaccgggtggagttgtcacaacggacattacttctcttgtgtcaaagctcaa
gaaggccagtggtataaaatggatgatgccgaggtcactgcctctggtatcacttctcct
ttgagtcaacaggcctatgtcctcttttacatccagaagaatgaatttggaagacccagt
tacagggtgtccgcaggcagggaaccaagagctctttgtgctgaagacaattga

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_8|530_aa
MEDDSLYLGGEWQFNHFSKLTSPRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVAR
QLAPREKLPLSSRRPAAVGAGLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRP
KCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH
KQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQL
VKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPEC
LDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSIT
SVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPEL
DEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHP
EQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_8|1593_bp
atggaggacgactcactctacttgggaggtgagtggcagttcaaccacttttcaaaactc
acatctcctcggccagatgcagcttttgctgaaatccagcggacttctctccctgagaag
tcaccactctcatctgagacccgtgtcgacctctgtgatgatttggctcctgtggcaaga
cagcttgctcccagggagaagcttcctctgagtagcaggagacctgctgctgtgggggct
ggtctccagaatatgggaaatacctgctacttgaatgcttccctgcagtgcctgacatac
acaccgccccttgccaactacatgctgtcccgggagcactctcaaacatgtcagcgtccc
aagtgctgcatgctctgtactatgcaagctcacatcacatgggccctccacagtcctggc
catgtcatccagccctcacaggcattggctgctggcttccatagaggcaagcaggaagat
gcccatgaatttctcatgttcactgtggatgccatgaaaaaggcatgccttcccggccac
aagcaggtagatcatcactctaaggacaccaccctcatccaccaaatatttggaggctgc
tggagatctcaaatcaagtgtctccactgccacgggatttcagacacttttgacccttac
ctggacatcgccctggatatccaggcagctcagagtgtcaagcaagctttggaacagttg
gtgaagcccgaagaactcaatggagagaatgcctatccttgcggtctttgtctccagagg
gcgccggcctccaacacgttaactttacacacttctgccaaggtcctcatccttgtcttg
aagagattctgcgatgtcacaggcaacaaacttgccaagaatgtgcaatatcctgagtgc
cttgacatgcagccatacatgtctcagcagaacacaggacctcttgtctatgtcctctat
gctgtgctggtccacgctgggtggagttgtcacaacggatattacttctcttatgtcaaa
gctcaagaaggccagtggtataaaatggatgatgccgaggtcactgcctgtagcatcact
tctgtcctgagtcaacaggcctatgtcctcttttacatccagaagagtgaatgggaaaga
cacagtgagagtgtgtcaagaggcagggaaccaagagcccttggcgctgaagacacagac
aggccagcaacgcaaggagagctcaagagagaccacccttgcctccaggtacccgagttg
gacgagcacttggtggaaagagccactgaggaaagcaccttagaccactggaaattcccc
caagagcaaaacaaaatgaagcctgagttcaacgtcagaaaagttgaaggtaccctgcct
cccaacgtacttgtgattcatcaatcaaaatacaagtgtgggatgaaaaaccaccatcct
gaacagcaaagctccctgctaaacctctcttcgatgaactcgacagatcaggagtccatg
aacactggcacactcgcttctctgcaagggaggaccaggagatccaaagggaagaacaaa
cacagcaagagatctctgcttgtgtgccagtga

>gi568815590r:7871664_7976395|GENSCAN_predicted_peptide_9|92_aa
XAVIKVDQPQRKAAQGTTQGSIEPQNLGRNPAQAPKCAYEQGLRVTTLYIRRTKPSDGPH
LAHEKTRERNGAKGHSPLIPSSSLKSSEFHGP

>gi568815590r:7871664_7976395|GENSCAN_predicted_CDS_9|279_bp
ngtgcagtgatcaaagttgaccaaccccagaggaaagctgcccagggcaccactcagggc
tccatagaaccacagaatcttggacgcaaccctgctcaagcacccaaatgtgcatacgaa
cagggtctccgtgtgacgacactttacatcaggcgcacgaagccttctgatggaccacac
ctggcccatgaaaagacaagggaaagaaacggggccaaaggtcacagtcctctcattcca
tcatcctccttaaaatcatccgaatttcatgggccctga