GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:05:45

Sequence gi568815590r:78660145_78862431 : 202287 bp : 35.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1425   1479   55  2  1   57   80    64 0.044   4.00
 1.02 Intr +   3293   3448  156  0  0   19   86    87 0.003   0.66
 1.03 Intr +   5882   5922   41  0  2  102   64    52 0.005   1.22
 1.04 Intr +   6491   6649  159  1  0   90  -51   184 0.001   3.96
 1.05 Intr +  18419  18535  117  1  0   60   55    81 0.042   1.74
 1.06 Intr +  26323  26464  142  0  1   65   28   194 0.079  10.11
 1.07 Intr +  29078  29229  152  0  2   82  103    50 0.075   4.86
 1.08 Intr +  37263  37362  100  2  1   70   63    73 0.037   1.76
 1.09 Intr +  38282  38369   88  0  1   65  110    52 0.019   3.21
 1.10 Intr +  45766  46027  262  1  1   53   96   157 0.033   9.57
 1.11 Term +  46159  46332  174  0  0   44   46   136 0.943   1.78
 1.12 PlyA +  47872  47877    6                               1.05

 2.00 Prom +  51787  51826   40                              -5.65
 2.01 Init +  51850  51962  113  0  2   51  108    66 0.988   4.63
 2.02 Intr +  55077  55184  108  0  0   98   91    43 0.940   4.08
 2.03 Term +  57184  57349  166  1  1   99   42   142 0.999   7.11
 2.04 PlyA +  57537  57542    6                               1.05

 3.05 PlyA -  58806  58801    6                               1.05
 3.04 Term -  63910  63779  132  1  0   46   51   121 0.248   1.31
 3.03 Intr -  78491  78360  132  2  0   79  115    21 0.274   3.82
 3.02 Intr -  83775  83629  147  0  0   67   71    48 0.018   0.51
 3.01 Init -  84737  84222  516  2  0    2  -11   316 0.118   8.03
 3.00 Prom -  92119  92080   40                              -5.15

 4.06 PlyA -  92469  92464    6                               1.05
 4.05 Term -  92762  92668   95  0  2  108   47    35 0.090  -1.59
 4.04 Intr -  98323  98149  175  1  1   14   86   118 0.110   2.79
 4.03 Intr - 102214 100237 1978  0  1   52   29  1425 0.072 119.37
 4.02 Intr - 119601 119427  175  1  1  -13   67   142 0.253   0.08
 4.01 Init - 119850 119688  163  0  1   70   72   127 0.742   9.24
 4.00 Prom - 124068 124029   40                              -5.25

 5.04 PlyA - 125130 125125    6                               1.05
 5.03 Term - 134039 133753  287  0  2   32   48   218 0.531   6.78
 5.02 Intr - 138054 137984   71  2  2   61   98    59 0.352   2.11
 5.01 Init - 141393 141371   23  0  2   98  107    30 0.835   5.15
 5.00 Prom - 142230 142191   40                              -8.95

 6.04 PlyA - 142809 142804    6                               1.05
 6.03 Term - 144548 144363  186  2  0   62   37   168 0.768   5.61
 6.02 Intr - 146682 146506  177  0  0   80   81   163 0.892  13.99
 6.01 Init - 177787 177695   93  1  0   58  109    65 0.305   6.03
 6.00 Prom - 180037 179998   40                              -6.75

 7.00 Prom + 180955 180994   40                              -3.05
 7.01 Init + 183265 183340   76  0  1   76   82    51 0.211   4.60
 7.02 Intr + 191314 191490  177  2  0   51   75   113 0.137   5.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -   6773   6596  178  2  1  107   56   196 0.958  16.87
S.002 Term +  26323  26511  189  0  0   65   39   220 0.850  11.27
S.003 Init +  45806  46027  222  1  0   74   96   142 0.818  12.20
S.004 Sngl + 108846 109673  828  2  0   33   43   309 0.930  16.38


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_1|481_aa
MFIVAAVRTNSVPITTEMRDLNFVWDLRDWSFETRSYMQLAQLFGMCRIDVDLLKGMVVE
SNIMQSGKNQVAEPMGARNVSGWEVTGFLHFDSIFCRRDVRASPKEVSLASFRAGTIDYP
EDLMTYSRPLCEEEPVLKKHGPICQKTATKKRKTFDSSRQRAEGTDIPTVKPLKPRPEPP
KKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAA
DRHINFCKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSPGTASSGSSRLPQPS
GAGKTVVGKVSSSSSSLGNKLQTLSPSHKGIAAPHAGWLWLSVGQRIPAGMVGGPSCEVL
LCDEEWIGNLLNQQSDHILVKKSCYAGESSLPLVGLYSPKPAEQLSHPNSKDGSLSLPLG
VPSQGMYGGLTSCFAGVAVTFAGKFGVPGSLPVPEQLLCQDSPYLYVRLKALVEWLHKGV
S

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_1|1446_bp
atgttcattgtagcagcagttagaaccaactcagtgcccatcactacagaaatgagggac
ttgaacttcgtgtgggatttaagagactggagctttgaaacaagaagctatatgcagctt
gctcagctttttgggatgtgcagaatagatgtggatctgcttaagggaatggtggttgaa
agcaatataatgcaaagtggaaagaatcaagttgcggaaccaatgggagctcggaatgtt
agcgggtgggaggtaaccggctttttacatttcgacagcatcttctgtcggagggatgtc
agagcatctcctaaggaagtgtcactggccagctttagagccggtacaatagattacccg
gaggatttgatgacttattcacggccgctgtgtgaggaagagcctgtattgaaaaaacat
ggacccatttgccagaagactgcaactaaaaaacggaagacttttgattcaagcagacag
agagctgaaggaactgatattccaacagtaaaacctctcaaaccgaggccagaaccacca
aagaaaccatctaattggagaaggaaacatgaagaattcattgctaccataagagcagct
aaaggccttgatcaggccctcaaagagggtggcaaacttcctcctcctcctccaccttct
tatgatcctgattatattcaatgtccatattgtcagaggagattcaatgaaaatgcagct
gatagacatataaatttctgtaaagaacaggcagcacgtattagtaataaagggaaattt
tctacagataccaaaggaaaaccaacttctcggacacaggtgtataagccacccgcactt
aaaaagtcaaattctcctggaactgcatcatcaggatcttcacgattaccgcagccaagt
ggcgctggcaaaactgttgtaggtaaagtgtcttcaagtagcagctctttgggaaacaaa
cttcagaccttatctccctctcataaagggatagcagcccctcatgcaggttggctttgg
ctctctgtgggccagagaataccagcagggatggttggaggtcccagttgtgaggtcctg
ctctgtgatgaggaatggattgggaacctgcttaaccagcagtctgaccacattttggta
aagaagtcatgctatgctggggaatcctctctgcctctggttggtttgtactctccaaag
cctgcagaacagctgagtcacccaaacagcaaagatggcagcctgtcccttcccctggga
gttccatcccagggtatgtacgggggtctaacatcctgctttgctggagttgcagttact
tttgctgggaagtttggagttcctgggtctttgcctgtgccggagcagctgctctgccaa
gactccccatatctgtatgtcagactgaaggctctagtggagtggcttcacaagggcgtc
tcttga

>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_2|128_aa
MDKLGPPLRTGRLVQRLYDSDTKSDSAIKRHELLPIYKANVKPRNSTPPSLARNPAPGVL
TNKRKTYTESYIARPDGDCASSLNGGNIKGIEGHSPGNLPKFCHECGTKYPVEWAKFCCE
CGIRRMIL

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_2|387_bp
atggacaagttaggccctccacttcgaacgggaagacttgtgcaaaggttgtatgacagt
gatacaaaatcagacagtgccatcaaaagacatgagttattacctatttacaaagctaat
gtcaaaccccgaaattccacaccacctagtttggcaagaaatcctgccccaggtgtgctt
acaaacaaaagaaaaacatatactgagagctacatagccaggccagatggggactgtgca
tcttcccttaatggtggaaatattaaaggcattgaaggacattcacctggaaacttacca
aaattctgccatgagtgtgggactaaataccctgtagaatgggccaaattttgctgtgaa
tgtggcattcgaagaatgattctatga

>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_3|308_aa
MCDPGNHTLPTNLCNLELGDPLLNPLHQGFQSNTQRYGSLGREAAQAHVGEPGTVDIPPS
GFPAKVTATPEKQEIRSLCIPLGKRLNPVGQAAMVCRPYFHGASKDKTHWLGIPASHQQQ
CCAYLGQSSQGEGKATIFTVWASHLFQPADFEESKPIGQKGSPNTAQLLYQHPSLVIPSA
TGKSKATRDWSRPPANHSSPMENWPNCARGKKKGRQRRTLKEGMFLFRAARKLRQFLKMN
STGDFDLHLLKVSEGTTILLNCTGQHLSHATSEFGLASSEQEQGPNGRPAGESGDADQRC
SIFINQIS

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_3|927_bp
atgtgtgaccctggaaaccacactcttcccacgaatctttgcaacctcgagttgggagat
cccctcttgaacccactccatcagggctttcagtctaatacacagagatacgggagtctt
ggcagagaagctgctcaggcacatgttggagaaccaggaactgtagatattccaccttca
ggcttcccggcaaaagtaactgcaactccagaaaagcaggagattagatccttgtgcata
cccttaggaaagaggctgaatccagtgggccaagcagcgatggtctgtaggccctacttc
catggtgcctcaaaggataagacacattggcttggaattccagccagccaccagcagcag
tgttgtgcctacctgggacagagttcccagggagaggggaaggccaccatcttcactgtt
tgggcaagtcacctttttcagcctgcagactttgaagagtccaaaccgatcgggcagaag
ggatcccccaacacagcacaattgctctaccaacacccttcactggtgataccttcagct
accggaaaatccaaggcaactagggactggagtagacccccagcaaaccacagcagccct
atggaaaattggccaaattgtgccagggggaaaaaaaaaggtaggcaacgtcgaacattg
aaggaaggtatgtttttattccgtgctgctcgcaagttgaggcaatttcttaaaatgaat
agcactggtgattttgatctccacttattaaaagtttcagaaggcacaacaatactgttg
aactgcactggccagcatctttcccacgcaaccagtgagtttgggctggccagttctgag
caggaacaagggccaaatggtagacctgctggagaaagtggagatgcagatcagagatgc
agcattttcattaaccaaatttcttga

>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_4|861_aa
MDKFLDRYILPRLNQEEVESLNRRITSSEIEAVINSLPTKKTRDQTDLELNSTRASIILT
PKPGRDTTKKENFRPTSLMNVNTKIFGKILPNQIQEHIEKLIHHDQVGFISGIFPRDPAR
CQKWVENCRRADLEDKTPDQLNKHYRLCAKHFETSMICRTGPYRTVLRDNAIPTIFDLNS
HLNNPHSRHRKRIKELSEDEIRTLKQKKIDETSEQEQKHKETNNSNAQNPSEEEGEGQDE
DILPLTLEEKENKEYLKYLLEILILMGRQNIPLDGHEADEIPEGLFTPDNFQALLECRIN
SGEEVLRKRFETTAVNTLFCSKTQQRQMLEICESCIREETLREVRDSHVFSIITDDVVDI
AGEEHLPVLVRFVDESHNLREEFIGFLPYEADAEILAVKFHTMITEKWGLNMEYCRGQAY
IVSSGFSSKMKVVASRLLEKYPQAIYTLCSFCALNMWLAKSVPVMGVSVALGTIEEVCSF
FHRSPQLLLELDNVISVLFQNSKERGKELKEICHSQWTGRHDAFEILVELLQALVLCLDG
INSDTNIRWNNCIAGRAFVLCSAVTDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFA
AGSLTAVLHSLNEVMENIEVYNEFWFEEATNLATKLDIQMKLPGKFRRAHQGNLESQLTF
ESYYKETLSVPTVEHIIQELKDIFSEQHLKALKCLSLVPSVMGQLKFNTLEEHHADMYRS
DLPNPDTLSAELHCWGIKWKHRGKDIELPSTIYEALQLPDIKFFPNVYALLKKAQERIKL
TGRADTLMKARKKSKLVTTENDQTVKINIKRGKRNKGYTEHSENSYQNDSRTWMKQETII
LSKLTQEQKTKDRTFSLLSGS

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_4|2586_bp
atggataaattcctggacagatatatactcccaagactgaaccaggaagaagttgaatcc
ttgaataggcgaataacaagttctgaaattgaggcagtaataaatagcctgccaaccaag
aaaacccgcgaccagacagatttagagctgaattctaccagagccagcatcattctcaca
ccaaaacctggcagagatactacaaaaaaagaaaacttcaggccaacatctctgatgaac
gtcaatacaaaaatcttcggtaaaatactgccaaaccaaatccaggagcacatcgaaaag
cttatccaccatgatcaagttggcttcatctctgggatcttcccgcgggaccctgccaga
tgccagaagtgggtggagaactgtaggagagcagacttagaagataaaacacctgatcag
ctaaataaacattatcgattatgtgccaaacattttgagacctctatgatctgtagaact
ggtccttataggacagttcttcgagataatgcaataccaacaatatttgatcttaacagt
catttgaacaacccacatagtagacacagaaaacgaataaaagaactgagtgaagatgaa
atcaggacactgaaacagaaaaaaattgatgaaacttctgagcaggaacaaaaacataaa
gaaaccaacaatagcaatgctcagaaccccagcgaagaagagggtgaagggcaagatgag
gacattttacctctaacccttgaagagaaggaaaacaaagaatacctcaaatatctactt
gaaatcttgattctgatgggaaggcaaaacatacctctggacggacatgaggctgatgaa
atcccagaaggtctctttactccagataactttcaggcactactggagtgtcggataaat
tctggtgaagaggttctgagaaagcggtttgagacaacagcagttaacacgttgttttgt
tcaaaaacacagcagaggcagatgctagagatctgtgagagctgtattcgagaagaaact
ctcagggaagtgagagactcacacgtcttttccattatcactgacgatgtagtggacata
gcaggggaagagcacctacctgtgttggtgaggtttgttgatgaatctcataacctaaga
gaggaatttataggcttcctgccttatgaagctgatgcagaaattttggctgtgaaattt
cacactatgataactgagaagtggggattaaatatggagtattgtcgtggccaggcttac
attgtctctagtggattttcttccaaaatgaaagttgttgcttctagacttttagagaaa
tatccccaagctatctacacactctgctctttctgtgccttaaatatgtggttggcaaaa
tcagtacctgttatgggagtatctgttgcattaggaacaatcgaggaagtttgttctttt
ttccatcgatcaccacaactgcttttagaacttgacaacgtaatttctgttctttttcag
aacagtaaagaaaggggtaaagaactgaaggaaatctgccattctcagtggacagggagg
catgatgcttttgaaattttagtggaactcctgcaagcacttgttttatgtttagatggt
ataaatagtgacacaaatattagatggaataactgtatagctggccgagcatttgtactc
tgcagtgcagtaacagattttgatttcattgttactattgttgttcttaaaaatgtccta
tcttttacaagagcctttgggaaaaacctccaggggcaaacctctgatgtcttctttgca
gccggtagcttgactgcagtactgcattcactcaacgaagtgatggaaaatattgaagtt
tataatgaattttggtttgaggaagccacaaatttggcaaccaaacttgatattcaaatg
aaactccctgggaaattccgcagagctcaccagggtaacttggaatctcagctaaccttt
gagagttactataaagaaaccctaagtgtcccaacagtggagcacattattcaggaactt
aaagatatattctcagaacagcacctcaaagctcttaaatgcttatctctggtaccctca
gtcatgggacaactcaaattcaatactttggaggaacaccatgctgacatgtatagaagt
gacttacccaatcctgacacgctgtcagctgagcttcattgttggggaatcaaatggaaa
cacagggggaaagatatagagcttccgtccaccatctatgaagccctccaactgcctgac
atcaagttttttcctaatgtgtatgcattgctgaagaaagcacaagaaagaattaaactc
acgggtagagcagatacactaatgaaagcaagaaagaaatcaaagcttgtcactacagaa
aatgaccaaactgtaaagataaatattaaaagaggaaagagaaacaaaggatatacagaa
cattcagaaaacagctatcaaaatgacagtaggacatggatgaagcaggaaaccatcatt
ctcagcaaactaacacaggaacagaaaaccaaagaccgcacgttctcactcctaagtggg
agttga

>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_5|126_aa
MAYGHGSRYIFGLPPLILVLLPVASSDCDIEDVLKNICDSWEEVKISTLTGVRKKLIPTV
IDDFEGFKTSIEKVNADMVEIARELELEVEPEDVTEMLKSQDKTGMDDELLLRHEQRKWF
LEMILL

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_5|381_bp
atggcttacggccatggctcacggtatatctttggacttcctcccctgatccttgttctg
ttgccagtagcatcatctgattgtgatattgaagatgtccttaaaaacatttgtgattca
tgggaggaggtcaaaatatccacattaacaggagttcggaagaagttgattccaactgtc
atagatgactttgaggggttcaagacttcaatagagaaagtaaatgcagatatggtagaa
atagcaagagaattagaattagaagtggagcctgaagatgtgactgaaatgctgaaatct
caggataaaactggaatggatgatgagttgcttctcaggcatgagcaaagaaagtggttt
cttgaaatgattttactttga

>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_6|151_aa
MRELLENSQAVLTEAILYSQHPSNKAADCPQYLLNASHGLKTIVSGRWAGRERPLWLEDS
DVVPRNVREGSGAQITRALRAWYPVGSDQKAASNSPQRLLSVLRGNAAASAPLSGGSPQP
VSEAAKGSLSGALPVLLAAPSYSRRRPGFGE

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_6|456_bp
atgagagaacttctagagaacagccaagcagtcctaactgaggccatcttatactcccag
cacccatccaacaaggcagctgactgtccacagtacttactgaatgccagccatgggcta
aagaccatagtaagtggacgctgggcaggaagagaaaggccattgtggctggaggatagt
gatgtggtaccacgaaacgtcagagagggcagtggggcccagatcaccagggcactgagg
gcctggtacccagtgggaagtgaccagaaggctgcgagtaacagtccccaacgcctgctt
tctgtcctgagagggaacgctgcagcctccgcgccgctcagcggtggcagcccacagccg
gtctcagaagcagccaaaggctctctgtctggcgcccttcccgtgctcctggccgcccca
agttactcacgcaggcggcccgggttcggcgagtag

>gi568815590r:78660145_78862431|GENSCAN_predicted_peptide_7|85_aa
MEVTEDFDLAMVQQSDRSRRKGGYEGTRPRVQKSLQILAGNKVLGKGTGQTMEWKSAFQE
KIRSCAYRINHQGLAMAKHFLASLX

>gi568815590r:78660145_78862431|GENSCAN_predicted_CDS_7|255_bp
atggaggtcactgaagactttgatctagccatggttcagcagagtgacaggagtaggaga
aagggaggatatgaaggcacacgacccagagttcagaaaagccttcaaatcctagcggga
aacaaagtgttaggcaaagggacagggcagactatggagtggaagtcagcatttcaggag
aaaatcaggtcctgtgcttacaggatcaatcaccagggcttggccatggcaaagcacttc
ctggcatcattgtnn