GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:29:45

Sequence gi568815590r:121514112_121729340 : 215229 bp : 38.73% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10871  10932   62  1  2   76  111    -8 0.515   1.07
 1.02 Term +  16226  16331  106  2  1   48   47   162 0.705   5.00
 1.03 PlyA +  16590  16595    6                               1.05

 2.03 PlyA -  16892  16887    6                               1.05
 2.02 Term -  18144  17921  224  1  2   62   44    92 0.004  -1.70
 2.01 Init -  65114  65000  115  2  1   78   89    88 0.737   8.32
 2.00 Prom -  66554  66515   40                              -3.05

 3.04 PlyA -  67016  67011    6                               1.05
 3.03 Term -  80171  79925  247  1  1  101   40   128 0.452   3.58
 3.02 Intr -  85560  85446  115  1  1   81   72    60 0.405   2.29
 3.01 Init -  89657  89624   34  2  1   57  106     7 0.424  -0.52
 3.00 Prom -  94667  94628   40                              -4.05

 4.04 PlyA -  94795  94790    6                               1.05
 4.03 Term - 100927  99998  930  1  0  104   39   433 0.963  31.15
 4.02 Intr - 103095 102994  102  0  0  142   88    98 0.995  14.65
 4.01 Init - 115265 114603  663  2  0   78   96   376 0.801  32.68
 4.00 Prom - 115565 115526   40                              -7.35

 5.04 PlyA - 116135 116130    6                               1.05
 5.03 Term - 124407 124266  142  2  1   87   42   121 0.820   3.82
 5.02 Intr - 125969 125829  141  1  0   38   60   167 0.571   7.45
 5.01 Init - 126458 126388   71  2  2   22   73    73 0.213  -0.23
 5.00 Prom - 139931 139892   40                              -3.35

 6.00 Prom + 147052 147091   40                              -4.75
 6.01 Init + 148882 148943   62  0  2   86   81    34 0.444   3.27
 6.02 Term + 152545 152902  358  1  1   40   48   209 0.408   5.10
 6.03 PlyA + 155727 155732    6                               1.05

 7.00 Prom + 157514 157553   40                              -8.15
 7.01 Init + 162305 162444  140  1  2  117   29   141 0.437  10.76
 7.02 Intr + 198567 198646   80  0  2   43  103    59 0.062   1.18
 7.03 Term + 199050 199192  143  1  2   79   49    65 0.069  -1.19
 7.04 PlyA + 201264 201269    6                               1.05

 8.00 Prom + 203735 203774   40                              -7.35
 8.01 Init + 205085 205414  330  1  0   38   49   222 0.839  10.66
 8.02 Intr + 205468 205577  110  0  2   80   24   100 0.525   0.96
 8.03 Term + 205766 206087  322  2  1  113   50   123 0.488   4.31
 8.04 PlyA + 206873 206878    6                               1.05

 9.02 PlyA - 208096 208091    6                               1.05
 9.01 Sngl - 210440 210219  222  2  0   83   48   145 0.538   4.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_1|55_aa
MMTSAAFDTSLPEFKLWYKSSLKFNQLFMEPPSSQASEGLALLFAAMGRRQQEAA

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_1|168_bp
atgatgacaagtgcggcctttgacaccagtttgccagagttcaaattatggtacaaaagc
agcttgaagttcaaccagctgtttatggaaccaccttcttctcaggcctctgaagggctt
gctctcctctttgcagcgatgggcagacggcagcaggaagctgcgtga

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_2|112_aa
MEYYAAVHVLCRDMDRAGSHYPQQTNAGMENQTPNILTLNIESCQCFWRRVLGGIIVKND
STENFESHWAMLWHPNRNKEVTVSWNNACFGTLGTSGEDDDIHLWRQGQQIH

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_2|339_bp
atggaatactatgcagctgttcatgtcctttgcagggacatggacagagctggaagccat
tatccccagcaaactaatgcaggaatggaaaaccaaacaccaaacattctcactttaaat
atagagtcatgtcagtgtttttggagaagagtgctagggggaataattgtaaaaaacgac
tctacagaaaactttgaaagtcactgggccatgctttggcatccaaatagaaataaagaa
gtaactgtaagttggaacaatgcctgctttggtaccttggggacttcaggggaagatgat
gatattcatctctggagacaagggcagcagatccattag

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_3|131_aa
MKQGIKRESGKNCDLLNAEVYVLFIFVNILYQHEMLFHGVKAIFVDQVNDTLALQILPKS
LPPMSGGCYAGQPLGLPLMLCSCSIKAAISASFSVALLLLMLPVANHSAVTGAVTMLFVF
FSTGSAAAPFL

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_3|396_bp
atgaagcaaggtataaagagagagagtggaaaaaactgtgatctgctcaacgcggaagtc
tatgtcttattcatctttgtaaacatactttatcaacatgaaatgctttttcacggagtg
aaggctatatttgttgatcaagtgaacgacactctagccctgcagattttgcccaaatcc
cttcctcctatgtcaggtggatgctatgcagggcagccccttggattacctctgatgctg
tgctcttgctcaattaaggctgccatctctgcgtccttctcagtcgctttgctcttgctg
atgcttcctgtagccaatcattctgctgtcacaggcgcagtcaccatgctctttgtgttc
ttttctacgggctctgctgctgctccctttttataa

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_4|564_aa
MVNQEYHLIILQMHCERFLCILRIIGTTLFGVSLLLGITAAYIVGYQFIQTDNYYFSFGL
YGAFLASHLIIQSLFAFLEHRKMKKSLETPIKLNKTVALCIAAYQEDPDYLRKCLQSVKR
LTYPGIKVVMVIDGNSEDDLYMMDIFSEVMGRDKSATYIWKNNFHEKGPGETDESHKESS
QHVTQLVLSNKSICIMQKWGGKREVMYTAFRALGRSVDYVQVCDSDTMLDPASSVEMVKV
LEEDPMVGGVGGDVQILNKYDSWISFLSSVRYWMAFNIERACQSYFGCVQCISGPLGMYR
NSLLHEFVEDWYNQEFMGNQCSFGDDRHLTNRVLSLGYATKYTARSKCLTETPIEYLRWL
NQQTRWSKSYFREWLYNAMWFHKHHLWMTYEAIITGFFPFFLIATVIQLFYRGKIWNILL
FLLTVQLVGLIKSSFASCLRGNIVMVFMSLYSVLYMSSLLPAKMFAIATINKAGWGTSGR
KTIVVNFIGLIPVSVWFTILLGGVIFTIYKESKRPFSESKQTVLIVGTLLYACYWVMLLT
LYVVLINKCGRRKKGQQYDMVLDV

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_4|1695_bp
atggttaaccaagagtatcatctgattatattacagatgcattgtgagaggtttctatgt
atcctgagaataattggaaccacactctttggagtctctctcctccttggaatcacagct
gcttatattgttggctaccagtttatccaaacggataattactatttctcttttggactg
tatggtgcctttttggcatcacacctcatcatccaaagcctgtttgcctttttggagcac
cgaaaaatgaaaaaatccctagaaacccccataaagttgaacaaaacagttgccctttgc
atcgctgcctatcaagaagatccagactacttaaggaaatgtttgcaatctgtgaaaagg
ctaacctaccctgggattaaagttgtcatggtcatagatgggaactcagaagatgacctt
tacatgatggacatcttcagtgaagtcatgggcagagacaaatcagccacttatatctgg
aagaacaacttccacgaaaagggtcccggtgagacagatgagtcacataaagaaagctcg
caacacgtaacgcaattggtcttgtccaacaaaagtatctgcatcatgcaaaaatggggt
ggaaaaagagaagtcatgtacacagccttcagagcactgggacgaagtgtggattatgta
caggtttgtgattcagacactatgcttgacccagcctcatctgtggagatggtaaaagtt
ttagaagaagatcccatggttggaggtgttgggggagatgtccagattttaaacaagtac
gattcctggatctcattcctcagcagtgtaagatattggatggcttttaatatagaaagg
gcctgtcagtcttattttgggtgtgttcagtgcattagtggacctctgggaatgtacaga
aactccttgttgcatgagtttgtggaagattggtacaatcaagaatttatgggcaaccaa
tgtagctttggtgatgacaggcatctcacgaaccgggtgctgagcctgggctatgcaaca
aaatacacagctcgatctaagtgccttactgaaacacctatagaatatctcagatggcta
aaccagcagacccgttggagcaagtcctacttccgagaatggctgtacaatgcaatgtgg
tttcacaaacatcacttgtggatgacctacgaagcgattatcactggattctttcctttc
tttctcattgccacagtaatccagctcttctaccggggtaaaatttggaacattctcctc
ttcttgttaactgtccagctagtaggtctcataaaatcatcttttgccagctgccttaga
ggaaatatcgtcatggtcttcatgtctctctactcagtgttatacatgtcgagtttactt
cccgccaagatgtttgcaattgcaacaataaacaaagctgggtggggcacatcaggaagg
aaaaccattgttgttaatttcataggactcattccagtatcagtttggtttacaatcctc
ctgggtggtgtgattttcaccatttataaggagtctaaaaggccattttcagaatccaaa
cagacagttctaattgttggaacgttgctctatgcatgctattgggtcatgcttttgacg
ctgtatgtagttctcatcaataagtgtggcaggcggaagaagggacaacaatatgacatg
gtgcttgatgtatga

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_5|117_aa
MYFSILHLPEQQRGSRVRKQEFPIPPAARRQGVRGDRALRFGSCGVPRANSDVAPRTPAL
LSSAAAGDTARYHLSRVNRKIYCGRADKCILPELLVLYPESNPFIKESYAVYKNSRT

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_5|354_bp
atgtacttttccattttgcatcttccggagcagcagaggggctccagagttaggaaacaa
gaattcccaatcccgccggccgcccggaggcagggcgtgcgtggggaccgcgcgctgcgc
ttcggcagctgcggcgtccccagagccaattccgacgtggcaccgcgcacgccggcgctt
ctctcctcagctgcagctggggacactgcccgatatcacctgagtcgggtaaatagaaaa
atatattgtggacgtgctgacaaatgcatattacctgagttgcttgtactgtacccggag
tcgaatccctttatcaaagaaagttatgcagtttataaaaattcaaggacttaa

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_6|139_aa
MVEGKVGAAISHGWSRRKRERSEAADLLGVTALKVVRLELFVPPGGFMVSLVSGVKLQTF
TVSVTAHKSSVDPKTEQQQDLLQSERTNFPQWKGTRAVCHCWLAQPAFILLSGPTHILLI
GPFYREWIGLFYRELIGPF

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_6|420_bp
atggtggaaggtaaagtgggagcagccatttcacacggctggagcagaagaaagagagaa
aggagtgaagctgcagaccttctcggtgttacagctcttaaggtggtgcgtctggagttg
ttcgttcctcccggtgggttcatggtctcgctggtttcaggagtgaagctgcagaccttc
acggtgagtgttacagctcataaaagcagtgtggatccaaagactgaacagcagcaagat
ttactgcagagcgaaagaacaaactttccacagtggaaggggaccagagcagtttgccac
tgctggcttgcgcagcctgcttttattctcttatctggccctacccacatcctgctgatt
ggtccattttacagagagtggattggtctgttttacagagagctgattggtcccttttga

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_7|120_aa
MVVTPVAAAARERKILGPHSGSSEKTRAGSAAQSPLPLGYALVLQPGVKDIQDPEIQIHG
PYRDILRSKYDNSGHKSQHTFHIFIDTSHLPALSGLTSKDREEKRDSQLFHFSNERIEIG

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_7|363_bp
atggtggtgactccagtggcagcagcagccagggagagaaagatcctgggtccccactcg
ggaagctcagaaaaaacaagagcaggctcagcagcgcagagccctttgcctctgggttat
gcacttgttctgcagccaggggtaaaagacattcaagatccagagatccagatacatggt
ccttacagggatattttaagaagcaaatacgataactcagggcacaagagccaacacacc
ttccacatcttcatcgatacttcacacctccctgctttgtcggggctcactagcaaggac
agggaagagaagagggacagtcagttgtttcatttctctaatgaaagaattgaaattggt
tag

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_8|253_aa
MRAKGEPGVKQREVCERLSVGSAHCTVSAGSRCQPRHQVSVMLQLDHVYCQQLPRLSPGN
GVAPGNLEMPGTTGLKKEVTAVAQGAPRSGVPKGPQLFSPALCLQRGEQGVPSSCPVTKK
NEARRQVKSKQNKEELYRAVEQFRDPLTGSLAPRLQAFPGLKMGLCWGPAALLPRSLTAC
GSHAWHLGCSHQGAPVGQHRAALSPHSAFPSTFVSTKSPEGAEAARSQRVSAALSVHKPC
LAVTASSLSPITL

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_8|762_bp
atgcgtgccaagggcgagccaggtgtgaagcaacgagaagtatgtgagcgactgagtgtg
gggtcggcccactgcacagtcagtgctggctccaggtgccagcccaggcaccaagtctct
gtgatgctgcagctagaccacgtatactgccagcagcttccccgactgtcaccaggaaat
ggagtggcgcctggaaacttggagatgccaggaaccacaggcctcaaaaaggaggtcaca
gccgtggctcagggagctcccaggtctggggtccccaaagggccacagctcttctctccc
gctctttgcctgcaacgtggtgagcaaggggtcccaagttcttgtcctgtgaccaagaag
aatgaggcacgcagacaagtgaagagtaagcaaaacaaagaggagctttacagagcagta
gaacagttcagagacccactgactggcagcctggcccccaggcttcaggccttccctggc
ctgaagatggggctttgctggggacctgctgccttactgcccaggagcctgactgcctgc
ggcagccatgcatggcacctaggctgctcgcaccaaggggcaccagtaggtcagcacaga
gctgccctcagcccacactcagctttcccttccacgtttgtcagcaccaaaagcccagag
ggggctgaggcagcaaggagccagcgtgtcagtgctgccctgagtgtgcacaaaccctgc
ttggctgtaacagcttccagcctcagtccaatcacactctga

>gi568815590r:121514112_121729340|GENSCAN_predicted_peptide_9|73_aa
MQGAQQYAGESSLCKQDSPTRTLPLGRTLRPPTKHNMKCEEQSWMVSLLSLGAPLITNKA
MCAWYTGIPTSAQ

>gi568815590r:121514112_121729340|GENSCAN_predicted_CDS_9|222_bp
atgcagggagcacagcagtatgcaggcgagtcatccctctgcaaacaggactcccccacc
cgaacccttccccttggccgcacactccgccctcctacaaaacacaacatgaaatgtgaa
gagcagagctggatggttagtctactttccctcggggccccactaatcacaaacaaggcc
atgtgcgcatggtacacggggatccctacatctgcccagtga