GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:20:21

Sequence gi568815590r:101100005_101301741 : 201737 bp : 43.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2969   3040   72  2  0   97  103    60 0.493   6.92
 1.02 Term +  12044  12158  115  2  1   95   45    60 0.056   0.44
 1.03 PlyA +  12519  12524    6                               1.05

 2.04 PlyA -  14296  14291    6                               1.05
 2.03 Term -  21365  21150  216  2  0   51   50   159 0.399   5.54
 2.02 Intr -  25153  25074   80  2  2   70   81   -14 0.142  -4.63
 2.01 Init -  28501  28441   61  1  1   69   93   126 0.875  12.61
 2.00 Prom -  38949  38910   40                              -1.86

 3.06 PlyA -  40267  40262    6                               1.05
 3.05 Term -  63368  63268  101  0  2   90   44   137 0.996   7.79
 3.04 Intr -  67395  67250  146  2  2   57   99    65 0.026   4.43
 3.03 Intr -  79763  79655  109  0  1  -13   95   127 0.040   2.64
 3.02 Intr -  97870  97840   31  1  1   90   95   -34 0.024  -4.80
 3.01 Init - 101737 101603  135  1  0   53   86   117 0.863   8.14
 3.00 Prom - 102125 102086   40                              -4.36

 4.00 Prom + 103581 103620   40                              -2.06
 4.01 Init + 104131 104133    3  0  0   58  103     0 0.660  -1.50
 4.02 Intr + 105056 105196  141  1  0   92   74   147 0.981  14.25
 4.03 Term + 108301 108318   18  0  0  121   44     1 0.226  -2.68
 4.04 PlyA + 108324 108329    6                               1.05

 5.00 Prom + 110636 110675   40                              -4.36
 5.01 Init + 120299 120396   98  1  2   81   -3   188 0.166   8.78
 5.02 Term + 162835 162943  109  1  1   50   40   119 0.194   1.28
 5.03 PlyA + 163998 164003    6                               1.05

 6.02 PlyA - 164014 164009    6                               1.05
 6.01 Term - 166980 166887   94  2  1  117   48   116 0.726   7.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 133898 133994   97  1  1   98   64    73 0.929   6.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:101100005_101301741|GENSCAN_predicted_peptide_1|62_aa
XERKLHKDRDVLLLDAQQPDYVWHMATFPWMSLPGEQPDPNSRVLTGQLSLGSGEMVTKG
HT

>gi568815590r:101100005_101301741|GENSCAN_predicted_CDS_1|189_bp
nntgaacgtaagctccacaaggacagggatgttttactgctagatgcccagcaaccagac
tatgtctggcacatggccacttttccctggatgtctctacctggtgagcagccagatcct
aacagcagggtgctgactggacagctctccctgggttctggagagatggtcacaaaggga
cacacgtga

>gi568815590r:101100005_101301741|GENSCAN_predicted_peptide_2|118_aa
MGFATSMHDRPYANSEYWLKGVGYYMKRFASVILRNSHFTKEETAAQKEKSKDLDNLQAD
CSASGLIHRVCQKSLQMPGHYASTLVSGCTWNWVDSCRRTTSAWAHPFSPPPVPHLTV

>gi568815590r:101100005_101301741|GENSCAN_predicted_CDS_2|357_bp
atgggcttcgccaccagcatgcacgatcggccctacgccaactcagaatactggttaaaa
ggtgttggatattatatgaagagatttgcaagtgttattttacgtaattcgcactttaca
aaggaggaaactgcagcgcagaaagagaaatcgaaggacctggacaatttgcaagctgac
tgctcagcttctggactcatccaccgcgtttgtcagaagtccctgcagatgcccggccac
tatgccagtactctcgtctcgggctgcacttggaactgggtggacagctgtagaaggact
actagtgcctgggcccaccccttctccccacccccagtgcctcacttaactgtctga

>gi568815590r:101100005_101301741|GENSCAN_predicted_peptide_3|173_aa
MARGQQKIQSQQKNAKKQAGQKKKQGHDQKAAAKAALIYTCTVCRLCIFCPPCLPLIQVE
DVGELDLLMASVYGMKEKGIKDASQVSGLISWWGGGGGPEDRQTTTVAPMEAVRMNWKER
LWERQRDENKPGLALPCAHTGKANQLNINTDLKSDKKHLQSILKACYLEPSSP

>gi568815590r:101100005_101301741|GENSCAN_predicted_CDS_3|522_bp
atggctcgtggacagcagaaaattcagtctcagcagaaaaatgccaaaaagcaagctgga
caaaagaagaaacaaggacatgaccaaaaggctgctgccaaagctgccttaatatatacc
tgcactgtctgtaggctctgcatattttgcccaccttgtcttcccttaatccaagtggaa
gatgttggagaattggacctgctgatggcttctgtgtatgggatgaaagaaaaaggaatc
aaagatgcctctcaggtctctggcttaatcagctggtggggtgggggtggaggccccgaa
gacaggcagactaccacagtagccccgatggaagcagtgagaatgaactggaaggagcgg
ctgtgggagcgacaacgtgatgagaataaacccggcttggctctgccctgtgcacacaca
ggaaaagccaaccagcttaacatcaacacagaccttaagtctgacaagaaacatttacag
tctattcttaaagcctgctacctggagccttcatctccatga

>gi568815590r:101100005_101301741|GENSCAN_predicted_peptide_4|53_aa
MATQPPSSQSSRTLDQDAPPGGRDCPKPGPCVHRERHTLAADRRLSPGTITQG

>gi568815590r:101100005_101301741|GENSCAN_predicted_CDS_4|162_bp
atggccacgcagcccccatctagccagtcctcacggaccctggaccaagacgcgcctcct
ggaggccgagactgcccgaaacccggcccctgcgtccaccgggagcgccacactctggca
gctgaccggcggctgtcgccggggacaattacccaaggttaa

>gi568815590r:101100005_101301741|GENSCAN_predicted_peptide_5|68_aa
MDECPEYTGNSNNSIANDDDDDDDDDDDNSIKYLNFRLHFRPDGFMLSATAWQDGCRCSS
VFNSKSSR

>gi568815590r:101100005_101301741|GENSCAN_predicted_CDS_5|207_bp
atggatgaatgtccagaatacacagggaactcaaacaactcaatagcaaatgatgatgat
gatgatgatgatgatgatgatgataattcaatcaaatatctcaactttcggctccacttc
cggcctgatggcttcatgctcagtgccacagcatggcaagatggctgccgctgctcctca
gtcttcaactccaagtccagcagatag

>gi568815590r:101100005_101301741|GENSCAN_predicted_peptide_6|31_aa
XSALTYAGSWLDERNPSKNELSIVQQVSFED

>gi568815590r:101100005_101301741|GENSCAN_predicted_CDS_6|96_bp
nngtccgcccttacctatgctggcagctggctcgatgaacgcaatccatccaaaaacgag
ctatccattgtgcagcaagtatcttttgaggactga